4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark
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List of experiments correlated with "ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark"  Help Download transcriptome of top 30
Score Experiment Correlation from
ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark		 Correlation to
ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark 1.00 >More info 1.00 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hMockDark 2 h mock dark seedling Original data
2 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight 0.91 >More info 0.90 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
3 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy		 0.89 >More info 0.88 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy		 2 h hypoxia +2' reoxy seedling Original data
4 rrd2 IBA 0.73 >More info 0.70 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
5 SAM SE agl15 agl18 double mutant 0.73 >More info 0.67 >More info SAM SE Col Original data GEO bulk
6 arp6-10 12 ºC -0.68 >More info -0.67 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
7 atmyc2 Seedling Dark 0.69 >More info 0.57 >More info WT Seedling Dark Original data GEO bulk
8 dark +H2O2 -0.66 >More info -0.59 >More info dark 5 mM H2O2 seedling Original data GEO bulk
9 KCl germinant 0.69 >More info 0.56 >More info Millipore Water germinant KCl seedling Original data
10 miR 0h -0.54 >More info -0.70 >More info Col 0h Leaf Original data GEO bulk
11 tbf1-mock spray 0.65 >More info 0.58 >More info WT-mock spray water for 6 hrs (spray) mature leaf Original data GEO bulk
12 3m.KNO3 0.53 >More info 0.63 >More info To. KNO3 14 day old Roots Original data GEO bulk
13 nNOS-drought 0.61 >More info 0.54 >More info WT-drought leaf Original data
14 TiO2 germinant 0.64 >More info 0.48 >More info Millipore Water germinant TiO2 seedling Original data
15 6m.KCl 0.52 >More info 0.60 >More info To. KCl 14 day old Roots Original data GEO bulk
16 3m.KCl 0.51 >More info 0.60 >More info To. KCl 14 day old Roots Original data GEO bulk
17 tbf1-SA 0.63 >More info 0.48 >More info WT-SA 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
18 nNOS-control 0.61 >More info 0.47 >More info WT-control leaf Original data
19 6m.KNO3 0.51 >More info 0.57 >More info To. KNO3 14 day old Roots Original data GEO bulk
20 arp6-10 2h 27 -degree-C -0.54 >More info -0.52 >More info Col-0 2h at 27 ºC whole seedlings Original data GEO bulk
21 cat2-2; 8h switch to ambient CO2 concentrations; -0.42 >More info -0.62 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
22 agb1 gpa1 -ABA LF 0.43 >More info 0.60 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
23 atmyc2 Seedling BL -0.62 >More info -0.40 >More info WT Seedling BL Original data GEO bulk
24 oxt6:AtCPSF30 line -0.57 >More info -0.45 >More info oxt6 mutant Original data GEO bulk
25 IAA7mII over-expressor IAA Treated 0.32 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
26 bHLH122 ox -0.48 >More info -0.53 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
27 gpa1 -ABA LF 0.33 >More info 0.67 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
28 agb1 -ABA LF 0.42 >More info 0.58 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
29 AFB1 0h -0.48 >More info -0.51 >More info Col 0h Leaf Original data GEO bulk
30 Nicotinamide-77hr 0.54 >More info 0.43 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
31 npr1-3 DCA 48h -0.45 >More info -0.52 >More info npr1-3 MOCK 48h Original data GEO bulk
32 atmyc2 cop1 Seedling BL -0.61 >More info -0.35 >More info WT Seedling BL Original data GEO bulk
33 Daminozide 3 h 0.45 >More info 0.51 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
34 Hydrogen Peroxide 500 uM -0.38 >More info -0.58 >More info Control RB and PER Hydrogen Peroxide Original data
35 WT-elf18 0.52 >More info 0.42 >More info WT-mock infiltration 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
36 toc1-1-69hr -0.51 >More info -0.42 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
37 cngc19 -0.41 >More info -0.52 >More info Col-0 root Original data GEO bulk
38 Dex-rga(delta17) 4h GA4 0.40 >More info 0.52 >More info Vector 4h GA4 shoots Original data GEO bulk
39 cngc1-3 -0.34 >More info -0.56 >More info Col-0 root Original data GEO bulk
40 2hr transitory KNO3 PeR cell 0.37 >More info 0.53 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
41 Dex-rga(delta17) 2h GA4 0.39 >More info 0.50 >More info Vector 4h GA4 shoots Original data GEO bulk
42 sfr3 cold 0.50 >More info 0.38 >More info WT-cold aerial tissues Original data GEO bulk
43 Propiconazole 3 h -0.32 >More info -0.54 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
44 Red/FR Light45min -0.21 >More info -0.65 >More info FarRed Light 45min Original data Light treatments
45 col-5 hrpA 2h 0.35 >More info 0.51 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
46 Inflorescences Trp1 -0.19 >More info -0.66 >More info Inflorescences ler inflorescences Original data GEO bulk
47 Laer pretreat GA Flg22 1h 0.14 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
48 2hr continuous KCl and MSX control PeR cell 0.27 >More info 0.58 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
49 Mutant ga1-5 0.52 >More info 0.32 >More info Ler-1 Original data Comparison of plant hormone related mutant
50 root - 04% oxygen - 30min -0.29 >More info -0.54 >More info root - 21% oxygen - 30min Original data GEO bulk
51 dark +lincomycin 0.28 >More info 0.53 >More info dark -lincomycin Original data GEO bulk
52 Total RNA 35S:HF-RPL18 -0.23 >More info -0.54 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
53 cop1 Seedling BL -0.61 >More info -0.15 >More info WT Seedling BL Original data GEO bulk
54 spx1 spx2 resupplied Pi 4h 0.52 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
55 bri1-116 0.02 >More info 0.73 >More info Col seedling Original data GEO bulk
56 gpa1 +ABA LF -0.50 >More info -0.24 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
57 light -0.54 >More info -0.18 >More info dark light seedling Original data GEO bulk
58 control leaf (cmt 1d) 0.21 >More info 0.51 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
59 46T-CK -0.50 >More info -0.20 >More info WT-CK none Original data
60 Paclobutrazol 3 h -0.10 >More info -0.60 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
61 mutant-line409 0.20 >More info 0.50 >More info WT-control whole plant Original data GEO bulk
62 opr3 OPDA 0.5 h -0.17 >More info -0.51 >More info opr3 0 h Original data GEO bulk
63 BAM7 Ox untreated -0.14 >More info -0.51 >More info WT untreated none shoot Original data
64 Col0-PsmES4326-24hpi -0.01 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
65 QC pSCR 3h BL -0.00 >More info -0.57 >More info QC pSCR 0h BL brassinosteroid root Original data
66 Leafminer damaged seedlings 0.00 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
67 2hr transitory KNO3 PrR cell 0.01 >More info -0.57 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
68 dsr1 -0.53 >More info -0.00 >More info WT mock Whole seedling Original data GEO bulk
69 NJ15 0.00 >More info -0.52 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
70 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
71 AtMYB30-as 90-105 min Xanthomonas -0.01 >More info 0.51 >More info WT 90-105 min Xanthomonas Original data GEO bulk
72 Shoot apex inflorescence (after bolting) -0.17 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
73 Heat shock optimum -0.17 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
74 6xX2x interploidy cross 0.05 >More info -0.51 >More info 2xX2x cross Original data GEO bulk
75 Col BTH -0.26 >More info 0.67 >More info Col rosettes Original data GEO bulk
76 siliques AtHb1 control -0.13 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
77 seed germinating in countinuous light 24h SL -0.28 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk