4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on 35S:GIF
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List of experiments correlated with "35S:GIF"  Help Download transcriptome of top 30
Score Experiment Correlation from
35S:GIF		 Correlation to
35S:GIF		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 35S:GIF 1.00 >More info 1.00 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
2 rGRF3x35S:GIF 0.88 >More info 0.83 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
3 rGRF 0.67 >More info 0.80 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
4 Day Time Treatment -0.66 >More info -0.61 >More info Day Time Control 1hr white light pulse aerial rosette Original data
5 sid2 0.55 >More info 0.61 >More info Col rosettes Original data GEO bulk
6 mkk2 control rep 0.57 >More info 0.56 >More info Col-0 Time 0 rep Original data GEO bulk
7 camta1 leaf water 0.54 >More info 0.58 >More info Col-0 leaf water leaf Original data GEO bulk
8 seedling 24h after Gamma WT -0.42 >More info -0.66 >More info seedling day 2 unirradiated WT 24h Original data
9 shl-2 Pool 0.49 >More info 0.58 >More info Ler Pool seedling Original data GEO bulk
10 ADD3 -0.64 >More info -0.42 >More info WT aerial part Original data GEO bulk
11 Shoot dark control 7h 0.48 >More info 0.58 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
12 ape2 low light 0.50 >More info 0.55 >More info Ws-2 low light Original data GEO bulk
13 sfr3 control -0.54 >More info -0.50 >More info WT control All aerial tissue Original data GEO bulk
14 Pseudomonas 0.39 >More info 0.65 >More info Control pseudomonas treated whole seedling Original data GEO bulk
15 seedling 24h after Gamma atm-1 -0.36 >More info -0.68 >More info seedling day 2 unirradiated atm-1 24h Original data
16 Shoot dark control 24h 0.51 >More info 0.52 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
17 mil4 sid2 0.45 >More info 0.58 >More info Col rosettes Original data GEO bulk
18 mil4 0.45 >More info 0.57 >More info Col rosettes Original data GEO bulk
19 Blue Light 4 h -0.35 >More info -0.66 >More info White Light 4 h Original data Light treatments
20 mutant acs9B (single mutant) 0.46 >More info 0.55 >More info col control (single mutant) Original data GEO bulk
21 24h volatiles Sm. R3089 0.45 >More info 0.56 >More info 24h untreated whole seedling Original data GEO bulk
22 4h decapitation -0.44 >More info -0.56 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
23 arr10 arr12 -0.43 >More info -0.57 >More info WT Original data GEO bulk
24 Col BTH 0.33 >More info 0.67 >More info Col rosettes Original data GEO bulk
25 Glyphosate EC50 -0.64 >More info -0.34 >More info Carrier (Glyphosate) Original data GEO bulk
26 OXUPB1-2 elongation zone -0.63 >More info -0.35 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
27 low CO2 + dark 0.42 >More info 0.56 >More info normal CO2 + light Original data GEO bulk
28 csn4-1 mutant -0.52 >More info -0.45 >More info WT dark Original data GEO bulk
29 petiole in D 0.40 >More info 0.57 >More info petiole in WL petioles Original data GEO bulk
30 Red Light 4 h 0.28 >More info 0.68 >More info White Light 4 h Original data Light treatments
31 Night Time Treatment -0.24 >More info -0.72 >More info Night Time Control 1hr white light pulse aerial rosette Original data
32 TaFLS overexpression line (OE2) 0.35 >More info 0.61 >More info Col-0 Rosette leaves Original data
33 Red/FR Light 4 h 0.30 >More info 0.65 >More info FarRed Light 4 h Original data Light treatments
34 +1.6 mM Tween 20 1 h. 0.41 >More info 0.54 >More info +distilled water 1 h. Original data GEO bulk
35 Col(gl) leaf 100mM NaCl 0.54 >More info 0.40 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
36 Col(gl) 100mM NaCl 0.54 >More info 0.40 >More info Col 100mM NaCl 100mM NaCl leaf Original data GEO bulk
37 Col-0 WT HL 3h -0.37 >More info -0.57 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
38 Mock pft1 leaf -0.60 >More info -0.33 >More info Mock Col-0 leaf water leaf Original data GEO bulk
39 B.cinerea 18 h infection -0.36 >More info -0.57 >More info Mock 18 h Original data Botrytis cinerea infection
40 Botrytis cinerea 18h -0.36 >More info -0.57 >More info control 18h Original data GEO bulk
41 WT 24h cold -0.56 >More info -0.36 >More info WT warm 24h cold entire aerial part Original data GEO bulk
42 Laer pretreat GA Flg22 1h 0.21 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
43 A. halleri 0.55 >More info 0.36 >More info A. thaliana mature leaves before flowering Original data GEO bulk
44 Leaf systemic -0.34 >More info -0.57 >More info Leaf control vegetative leaf Original data GEO bulk
45 MIL4 ox 0.33 >More info 0.58 >More info Col Original data GEO bulk
46 30m light -0.14 >More info -0.76 >More info before light whole seedlings Original data GEO bulk
47 MYB12OX/tt4 0.29 >More info 0.61 >More info Col-0 aerial part Original data
48 Imidazolinone EC50 -0.54 >More info -0.35 >More info Carrier (Imidazolinone) Original data GEO bulk
49 60m light -0.20 >More info -0.69 >More info before light whole seedlings Original data GEO bulk
50 WT+sucrose -0.52 >More info -0.36 >More info WT+no sugars rosette leaves Original data GEO bulk
51 ABA 0.5 h -0.27 >More info -0.60 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
52 ptpks2 -0.35 >More info -0.52 >More info Col-WT leaves Original data GEO bulk
53 Light 0.5h polysome-bound -0.18 >More info -0.68 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
54 tt4 0.30 >More info 0.54 >More info Col-0 aerial part Original data
55 IAA7mII over-expressor IAA Treated 0.15 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
56 bbx24 in Simulated Shade 0.55 >More info 0.28 >More info WT in simulated shade shade seedling Original data
57 Shoot apex inflorescence (after bolting) 0.18 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
58 long 17-degree- -0.15 >More info -0.68 >More info control long Original data GEO bulk
59 Kas-1 -Fe 24h 0.29 >More info 0.54 >More info Kas-1 +Fe 24h roots Original data GEO bulk
60 1 h Light Total RNA -0.33 >More info -0.50 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
61 Kas -Fe 24h Roots 0.29 >More info 0.54 >More info Kas +Fe 24h Roots Original data GEO bulk
62 mkk1 24h BTH rep 0.22 >More info 0.61 >More info Col-0 24h BTH rep Original data GEO bulk
63 petiole in FRD 0.26 >More info 0.56 >More info petiole in WL petioles Original data GEO bulk
64 dde2-2 24hpi A. brassicicola -0.26 >More info -0.56 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
65 gapcp1gapcp2 ABA 0.24 >More info 0.58 >More info WT ABA ABA seedling Original data GEO bulk
66 mutant acs2C (single mutant) 0.30 >More info 0.51 >More info col control (single mutant) Original data GEO bulk
67 sdg8-2 mutant -0.30 >More info -0.51 >More info wild type leaf Original data GEO bulk
68 WT 3H Cold -0.52 >More info -0.28 >More info WT control Original data GEO bulk
69 Heat shock optimum 0.15 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
70 pap1-D/tt4 0.29 >More info 0.51 >More info Col-0 aerial part Original data
71 NJ15 -0.29 >More info -0.51 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
72 gapcp1gapcp2 -0.50 >More info -0.29 >More info WT Original data GEO bulk
73 msh1 recA3 untreated -0.56 >More info -0.23 >More info WT untreated above-ground parts Original data GEO bulk
74 Whole root - S 3H -0.24 >More info -0.55 >More info Whole root - S 0H Original data GEO bulk
75 WT hypoxia 0.24 >More info 0.55 >More info WT normoxia whole rosette Original data
76 R. solani AG2-1 -0.63 >More info -0.15 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
77 short 17-degree- -0.24 >More info -0.54 >More info control short Original data GEO bulk
78 camta1-2 0.10 >More info 0.68 >More info Col-0-WT Original data GEO bulk
79 FarRed Light 4 h -0.09 >More info -0.69 >More info White Light 4 h Original data Light treatments
80 bak1-3 +Pep2 2h -0.21 >More info -0.57 >More info WT +Pep2 2h Pep2 Original data GEO bulk
81 WT cold -0.21 >More info -0.57 >More info WT control All aerial tissue Original data GEO bulk
82 (Ws-2)+100 uM As -0.52 >More info -0.25 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
83 chito-tetramer -0.59 >More info -0.17 >More info Col Mock Original data GEO bulk
84 Triazolopyrimidine EC50 -0.51 >More info -0.25 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
85 Genotoxic Stress 3 h (shoot) -0.68 >More info -0.08 >More info Stress mock 3 h (shoot) Original data Stress treatments
86 Dark 44min pls RedLigh 1min -0.19 >More info -0.57 >More info Dark 45 min Original data Light treatments
87 penta mutant (higher order mutant) 0.18 >More info 0.58 >More info col control (higher order mutant) Original data GEO bulk
88 fls1-3 0.26 >More info 0.50 >More info Col-0 Rosette leaves Original data
89 Atss3 Light1 -0.18 >More info -0.57 >More info Atss3 Dark0.5 Original data GEO bulk
90 aba2 1% sucrose 12-day-old 0.23 >More info 0.52 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
91 Oxidative Stress 3 h (shoot) -0.59 >More info -0.15 >More info Stress mock 3 h (shoot) Original data Stress treatments
92 toc1-1-89hr -0.18 >More info -0.55 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
93 bri1-116 0.00 >More info 0.73 >More info Col seedling Original data GEO bulk
94 ein2-1 24hpi A. brassicicola -0.21 >More info -0.52 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
95 Col-0 RNAi-MBS2/mbs1-1 HL 0h -0.62 >More info -0.10 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
96 root cells epidermis and lateral root cap -Fe -0.63 >More info -0.09 >More info whole roots standard Original data GEO bulk
97 WT Red light 1h -0.11 >More info -0.61 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
98 bak1-3 +Pep2 10h -0.52 >More info -0.19 >More info WT +Pep2 10h Pep2 Original data GEO bulk
99 Dark 40 min pls UV-A 5 min -0.14 >More info -0.57 >More info Dark 45 min Original data Light treatments
100 Col-0 DEX Shade 0.19 >More info 0.52 >More info Col-0 DEX WL seedlings Original data
101 HSP90 Reduced hsp90.2 0.51 >More info 0.19 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
102 AmGSTF1 expressor 0.06 >More info 0.64 >More info WT leaf tissue Original data GEO bulk
103 Imbibed 24 h ABA 3uM (seed) 0.17 >More info 0.52 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
104 oas-a1.1 root -0.17 >More info -0.52 >More info WT-Untreated Root Original data GEO bulk
105 cys-c1 leaf -0.50 >More info -0.19 >More info Leaf-WT leaves Original data GEO bulk
106 low R/FR SA 0.53 >More info 0.15 >More info low R/FR low R/FR SA spray Original data GEO bulk
107 Col(gl) leaf 0mM NaCl 0.16 >More info 0.52 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
108 tmm1-inflorescence-tips 0.00 >More info -0.68 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
109 Col(gl) 0mM NaCl 0.16 >More info 0.52 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
110 Light 0.5h steady-state -0.05 >More info -0.61 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
111 12h volatiles Sm. R3089 0.15 >More info 0.51 >More info 12h untreated whole seedling Original data GEO bulk
112 ape2 high light 0.16 >More info 0.50 >More info Ws-2 high light Original data GEO bulk
113 Leafminer damaged seedlings 0.10 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
114 FarRed Light 45min 0.02 >More info 0.63 >More info White Light 45min Original data Light treatments
115 seed germinating in countinuous light 24h SL -0.02 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
116 root BA 12h -0.52 >More info -0.12 >More info root control 12h boron (5mM) root Original data GEO bulk
117 2d dark-grown WT(Col-0)/1 hr red light -0.05 >More info -0.59 >More info 2d dark-grown WT seedling Original data GEO bulk
118 2xX6x interploidy cross -0.57 >More info -0.06 >More info 2xX2x cross Original data GEO bulk
119 pil5 dark -0.50 >More info -0.12 >More info Col-0 dark Original data GEO bulk
120 G3P -0.02 >More info -0.60 >More info Mock distal leaves Original data GEO bulk
121 lht1 untreated -0.07 >More info -0.54 >More info WT untreated untreated leaf Original data GEO bulk
122 Col-0 6h NAA -0.50 >More info -0.11 >More info Col-0 6h MOCK Original data GEO bulk
123 M6PR transgenic leaf 0mM NaCl 0.09 >More info 0.52 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
124 seedling 1.5h after HZE atm-1 0.11 >More info 0.50 >More info seedling day 1 unirradiated atm-1 1.5h Original data
125 short 12-degree- 0.00 >More info -0.60 >More info control short Original data GEO bulk
126 WT Na2S -0.09 >More info -0.51 >More info WT water Na2S leaf Original data GEO bulk
127 long 10-degree- -0.06 >More info -0.53 >More info control long Original data GEO bulk
128 rpl24 total 0.51 >More info 0.06 >More info WT total seedling shoot/aerial seedling Original data
129 rpl24 nonpolysome 0.54 >More info 0.03 >More info WT nonpolysome seedling shoot/aerial seedling Original data
130 Light 4h steady-state -0.00 >More info -0.56 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
131 Indigo Carmine 0.5 uM 0.01 >More info 0.50 >More info Control MV and IC Indigo Carmine Original data
132 Laer GA 1h -0.07 >More info 0.56 >More info Laer Control leaf discs Original data GEO bulk
133 des1.1 0.61 >More info -0.12 >More info Leaves-WT leaf Original data GEO bulk
134 PNO8 12 h -0.10 >More info 0.58 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
135 siliques AtHb1 control -0.05 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
136 Col0-PsmES4326-24hpi -0.17 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
137 vtc1-1 0.09 >More info -0.50 >More info Col-0 whole plant Original data GEO bulk
138 Light 4h polysome-bound 0.19 >More info -0.55 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
139 Red/FR Light45min 0.16 >More info -0.51 >More info FarRed Light 45min Original data Light treatments
140 CCA1-ox 6am non-polysomal -0.18 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
141 amiRAP hypoxic -0.51 >More info 0.19 >More info hypoxic hypoxia Original data GEO bulk
142 GO5; 0h switch to ambient CO2 concentrations; -0.29 >More info 0.53 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
143 Mutant iaa5_6_19 0.50 >More info -0.29 >More info Col Original data GEO bulk
144 GV3101 3hpi -0.33 >More info 0.54 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk