4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root hypoxia pPEP
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List of experiments correlated with "root hypoxia pPEP"  Help Download transcriptome of top 30
Score Experiment Correlation from
root hypoxia pPEP		 Correlation to
root hypoxia pPEP		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root hypoxia pPEP 1.00 >More info 1.00 >More info root hypoxia total hypoxia root Original data GEO bulk
2 root control pPEP 0.88 >More info 0.86 >More info root control total control root Original data GEO bulk
3 root hypoxia pGL2 0.66 >More info 0.73 >More info root hypoxia total hypoxia root Original data GEO bulk
4 root hypoxia pCO2 0.66 >More info 0.71 >More info root hypoxia total hypoxia root Original data GEO bulk
5 root hypoxia pSUC2 0.73 >More info 0.63 >More info root hypoxia total hypoxia root Original data GEO bulk
6 root control pGL2 0.62 >More info 0.61 >More info root control total control root Original data GEO bulk
7 toc1-1-53hr 0.52 >More info 0.62 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
8 AgNO3 3 h 0.49 >More info 0.63 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
9 root control pSultr2:2 0.54 >More info 0.57 >More info root control total control root Original data GEO bulk
10 toc1-1-85hr 0.45 >More info 0.64 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
11 toc1-1-73hr 0.51 >More info 0.58 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
12 SCR-GR Time 1H Dex 0.37 >More info 0.71 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
13 4C 1h 0.35 >More info 0.71 >More info 4C 0h Original data GEO bulk
14 root hypoxia pWOL 0.50 >More info 0.50 >More info root hypoxia total hypoxia root Original data GEO bulk
15 WT-16ºC -0.58 >More info -0.42 >More info WT-23ºC Original data GEO bulk
16 AFB1 0h 0.44 >More info 0.56 >More info Col 0h Leaf Original data GEO bulk
17 root control pSUC2 0.55 >More info 0.44 >More info root control total control root Original data GEO bulk
18 WT 30μM arsenate 8 hours. 0.54 >More info 0.45 >More info WT control (not supplemented). Original data
19 roottip control pWOL 0.46 >More info 0.53 >More info roottip control total control roottip Original data GEO bulk
20 ein2 mutant roots mock -0.47 >More info -0.51 >More info roots mock Original data GEO bulk
21 rrd1 IBA -0.50 >More info -0.45 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
22 CMV-A2b mutant 0.33 >More info 0.61 >More info Mock-At Aerial tissues Original data GEO bulk
23 CeO2 germinant -0.37 >More info -0.57 >More info Millipore Water germinant CeO2 seedling Original data
24 Roots Cd -0.42 >More info -0.50 >More info Roots control Cd Root Original data GEO bulk
25 roottip hypoxia pWOL 0.41 >More info 0.50 >More info roottip hypoxia total Original data GEO bulk
26 miR 0h 0.34 >More info 0.57 >More info Col 0h Leaf Original data GEO bulk
27 Col0-PsmES4326-24hpi 0.30 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
28 TNT-seedlings 0.32 >More info 0.59 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
29 6h +Pi -0.51 >More info -0.39 >More info 6h -Pi root Original data GEO bulk
30 root hypoxia pRPL11C 0.39 >More info 0.51 >More info root hypoxia total hypoxia root Original data GEO bulk
31 low CO2 + light 0.28 >More info 0.62 >More info normal CO2 + light Original data GEO bulk
32 2 hr Hypoxia IP RNA 0.38 >More info 0.52 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
33 seedling h S Exp -0.33 >More info -0.56 >More info seedling -S Exp seedling Original data
34 root cells cortex -Fe 0.63 >More info 0.26 >More info whole roots standard Original data GEO bulk
35 ARR22-ox (t-zeatin 3 h) 0.52 >More info 0.37 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
36 shoot hypoxia pRBCS 0.33 >More info 0.55 >More info shoot hypoxia total Original data GEO bulk
37 9 hr Hypoxia 1 hr recovery Total RNA 0.50 >More info 0.38 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
38 tfl1-1-16ºC 0.28 >More info 0.58 >More info WT-16ºC Original data GEO bulk
39 sfr6 drought -0.28 >More info -0.58 >More info WT drought All aerial tissue Original data GEO bulk
40 Dark -0.31 >More info -0.54 >More info Control Original data GEO bulk
41 dense canopy 0.30 >More info 0.55 >More info single (control) petiole Original data GEO bulk
42 dorn1-1 Root 100 mM ATP 30 min -0.33 >More info -0.51 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
43 Laer pretreat GA Flg22 1h 0.12 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
44 Col BTH 0.15 >More info 0.67 >More info Col rosettes Original data GEO bulk
45 Mutant axr3-1 (IAA) 0.27 >More info 0.54 >More info Col (IAA) Original data GEO bulk
46 Col ozone 3h 0.23 >More info 0.58 >More info Col clean-air 3h ozone Original data GEO bulk
47 Root dark control 24h 0.50 >More info 0.30 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
48 toc1-1-57hr 0.51 >More info 0.29 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
49 Nicotinamide-69hr 0.29 >More info 0.50 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
50 glk1 glk2 GLK1-GR +DEX 4h 0.51 >More info 0.27 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
51 shoot hypoxia p35S 0.23 >More info 0.55 >More info shoot hypoxia total Original data GEO bulk
52 Chemically 0.16 >More info 0.62 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
53 21h-DC3000 avrRpm1 -0.25 >More info -0.52 >More info 21h-DC3000 leaves Original data GEO bulk
54 root epidermis and lateral root cap -S -0.26 >More info -0.51 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
55 PNO8 3 h 0.19 >More info 0.57 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
56 bri1-116 0.03 >More info 0.73 >More info Col seedling Original data GEO bulk
57 ABA JA 24h 0.13 >More info 0.63 >More info EtOH 24h 24hr Original data GEO bulk
58 2hr transitory KNO3 PrR cell 0.20 >More info 0.56 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
59 Leafminer damaged seedlings 0.20 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
60 WT Shoot Hypoxia 0.25 >More info 0.50 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
61 Light 3day wt -0.15 >More info -0.58 >More info 0h wt Original data
62 afb3-1 2h KNO3 0.21 >More info 0.52 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
63 3x(m) 0.11 >More info 0.61 >More info 2x two week old seedlings Original data
64 35S:ATR1 like miR -0.09 >More info -0.60 >More info WT for miR Original data GEO bulk
65 WT 3H Cold 0.17 >More info 0.51 >More info WT control Original data GEO bulk
66 t-zeatin 0.5 h -0.14 >More info -0.52 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
67 ABA SA 24h 0.14 >More info 0.52 >More info EtOH 24h 24hr Original data GEO bulk
68 sim smr1 -0.11 >More info -0.54 >More info WT seedling Original data GEO bulk
69 AVG 3 h -0.13 >More info -0.51 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
70 Heat shock optimum -0.01 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
71 IAA7mII over-expressor IAA Treated -0.05 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
72 tunicamycin -0.07 >More info -0.55 >More info DMF Original data GEO bulk
73 xyl-grown cell culture- 1h 1mM Suc 0.10 >More info 0.51 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
74 cpctry 0.09 >More info 0.50 >More info Col Original data GEO bulk
75 oas-a1.1 root -0.06 >More info -0.52 >More info WT-Untreated Root Original data GEO bulk
76 siliques AtHb1 control 0.04 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
77 miR393 0h -0.03 >More info -0.50 >More info WT 0h Leaf tissue Original data GEO bulk
78 seed germinating in countinuous light 24h SL -0.14 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
79 tga1 tga4 2h KNO3 0.18 >More info -0.67 >More info Col 0 2h KNO3 5 mM KNO3 root Original data GEO bulk
80 Shoot apex inflorescence (after bolting) -0.18 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
81 CCA1-ox 6am non-polysomal -0.08 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
82 4d red light grown hmr-22 seedlings 0.51 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data