4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on msh1 recA3 heat shock
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List of experiments correlated with "msh1 recA3 heat shock"  Help Download transcriptome of top 30
Score Experiment Correlation from
msh1 recA3 heat shock		 Correlation to
msh1 recA3 heat shock		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 msh1 recA3 heat shock 1.00 >More info 1.00 >More info WT heat shock above-ground parts Original data GEO bulk
2 msh1 recA3 untreated 0.84 >More info 0.84 >More info WT untreated above-ground parts Original data GEO bulk
3 Imidazolinone EC50 0.73 >More info 0.71 >More info Carrier (Imidazolinone) Original data GEO bulk
4 35S::PI ap3-3 35S::AP-GR +DEX 0.68 >More info 0.66 >More info 0hr DEX Original data GEO bulk
5 Glyphosate EC50 0.74 >More info 0.58 >More info Carrier (Glyphosate) Original data GEO bulk
6 Primisulfuron EC50 0.72 >More info 0.59 >More info Carrier (primisulfuron) Original data GEO bulk
7 sta1 0.73 >More info 0.58 >More info WT Original data GEO bulk
8 Sulfometuron EC50 0.74 >More info 0.57 >More info Carrier Original data GEO bulk
9 UV 0.71 >More info 0.57 >More info WT aerial region Original data GEO bulk
10 Triazolopyrimidine EC50 0.71 >More info 0.56 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
11 csn3-1 light 0.73 >More info 0.53 >More info WT light Original data GEO bulk
12 ahg2-1sid2-2 0.67 >More info 0.58 >More info WT (Col) control Original data GEO bulk
13 aox1a:rpoTmp untreated 0.70 >More info 0.55 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
14 csn5 (csn5a-2 csn5b) light 0.73 >More info 0.52 >More info WT light Original data GEO bulk
15 Col BTH 0.52 >More info 0.67 >More info Col rosettes Original data GEO bulk
16 upf1 0.65 >More info 0.53 >More info WT whole plant Original data GEO bulk
17 csn4-1 dark 0.64 >More info 0.54 >More info WT light Original data GEO bulk
18 rcf1-1 cold 24h 0.55 >More info 0.62 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
19 apum23 0.60 >More info 0.55 >More info WT (Col-3) aerial parts Original data GEO bulk
20 prors1-2 leaves 0.55 >More info 0.60 >More info Col-0 leaves leaves Original data
21 WT-SA 0.56 >More info 0.59 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
22 LTN008-2 aza-dc 0.69 >More info 0.44 >More info LTN012-2 Mock Original data
23 sni1 0.56 >More info 0.56 >More info WT Original data GEO bulk
24 pnp1-1 1wk +P 0.71 >More info 0.41 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
25 RPL18 TuMV inoculated polysomal RNA 0.60 >More info 0.51 >More info mock inoculated polysomal RNA PO Original data GEO bulk
26 pnp1-1 1wk -P 0.75 >More info 0.36 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
27 Leaf GLU1-KO 0.64 >More info 0.47 >More info Leaf Col(0) rosette leaves Original data GEO bulk
28 RPL18 TuMV inoculated total RNA 0.62 >More info 0.49 >More info mock inoculated total RNA PO Original data GEO bulk
29 smg5-2 0.56 >More info 0.54 >More info WT whole plant Original data GEO bulk
30 WT powdery mildew 0.51 >More info 0.59 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
31 upf3 0.55 >More info 0.55 >More info WT whole plant Original data GEO bulk
32 CLO 4mM 0.57 >More info 0.52 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
33 rpoTmp(line) MLD stressed 0.60 >More info 0.49 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
34 root endodermis and quiescent center pH4.6 0.51 >More info 0.57 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
35 pil5 red light 0.53 >More info 0.54 >More info Col-0 red light Original data GEO bulk
36 CMP 4hr 0.63 >More info 0.44 >More info Acetone 4hr root Original data GEO bulk
37 Shoot -Cs 0.42 >More info 0.65 >More info Control-shoot Original data GEO bulk
38 Col whole leaf 5dpi 0.56 >More info 0.50 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
39 sid2 -0.55 >More info -0.50 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
40 cdpk6-yfp 0.66 >More info 0.39 >More info Kan seedlings Original data GEO bulk
41 Cor 24h 0.51 >More info 0.54 >More info Mock 24h Cor Original data GEO bulk
42 Norflurazon 0.56 >More info 0.48 >More info Col-0 Original data GEO bulk
43 S15-118 0.57 >More info 0.47 >More info wt Original data GEO bulk
44 Norflurazon 0.56 >More info 0.48 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
45 ahg2-1 0.43 >More info 0.61 >More info WT (Col) control Original data GEO bulk
46 msh1 albino 0.66 >More info 0.36 >More info WT aerial part Original data GEO bulk
47 pnp1-1 3h +P 0.69 >More info 0.33 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
48 Fenclorim 4hr 0.53 >More info 0.49 >More info Acetone 4hr root Original data GEO bulk
49 GO5; 8h switch to ambient CO2 concentrations; 0.53 >More info 0.49 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
50 ceh1 mutant 0.49 >More info 0.53 >More info Parent line Original data
51 Col leaves 48h LT 0.52 >More info 0.49 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
52 Elevated CO2 expanding leaf 0.47 >More info 0.54 >More info Ambient CO2 expanding leaf expanding leaf Original data
53 etr1 1% sucrose 12-day-old 0.50 >More info 0.50 >More info Col-0 1% sucrose 12-day-old Original data GEO bulk
54 short 12-degree- 0.39 >More info 0.61 >More info control short Original data GEO bulk
55 msh1 variegation Col-0 0.77 >More info 0.22 >More info WT Col-0 above ground part of plant Original data GEO bulk
56 Mutant siz1-3 0.55 >More info 0.44 >More info Col-0 Original data GEO bulk
57 Botrytis cinerea 48h 0.58 >More info 0.41 >More info control 48h Original data GEO bulk
58 siz1-3 control 0.55 >More info 0.44 >More info Col-0 control Original data GEO bulk
59 smg7b-1 0.44 >More info 0.55 >More info WT whole plant Original data GEO bulk
60 AvrRpt2 Col-0 6hpi 0.50 >More info 0.48 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
61 S14-150 0.61 >More info 0.37 >More info wt Original data GEO bulk
62 UV Stress 24 h (shoot) 0.60 >More info 0.38 >More info Stress mock 24 h (shoot) Original data Stress treatments
63 Cor 10h 0.52 >More info 0.46 >More info Mock 10h Cor Original data GEO bulk
64 sicy-192 gun1-101 cotyledons 0.52 >More info 0.46 >More info WT cotyledons cotyledons Original data
65 S58-2 0.45 >More info 0.53 >More info wt Original data GEO bulk
66 csn4-1 mutant 0.58 >More info 0.39 >More info WT dark Original data GEO bulk
67 hrcC 0.59 >More info 0.38 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
68 Col-0 INA 48h 0.40 >More info 0.57 >More info Col-0 MOCK 48h Original data GEO bulk
69 Col0-PsmES4326-24hpi 0.36 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
70 shoots WT 0uM Fe 0.71 >More info 0.25 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
71 cpr5 0.55 >More info 0.41 >More info WT seedling Original data GEO bulk
72 root cortex pH4.6 0.58 >More info 0.38 >More info root cortex pH5.7 Original data GEO bulk
73 WT AntimycinA 3h 0.55 >More info 0.41 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
74 cop1 Seedling BL+ABA 0.38 >More info 0.58 >More info WT Seedling BL+ABA Original data GEO bulk
75 oligomycin 4 h 0.63 >More info 0.32 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
76 pnp1-1 3h -P 0.65 >More info 0.30 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
77 COL-0-Fe--shoot 0.57 >More info 0.38 >More info COL-0-Ctrl--shoot shoot Original data
78 SLWF infested 0.39 >More info 0.55 >More info SLWF uninfested rosette tissue Original data GEO bulk
79 bio4-1 mutant leaves 0.52 >More info 0.42 >More info WT leaves leaves Original data GEO bulk
80 pad4-est1b-1-doublemutant 0.50 >More info 0.44 >More info pad4-mutant developed rosette leaves Original data GEO bulk
81 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.57 >More info -0.37 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
82 nia1nia2noa1-2 0.61 >More info 0.33 >More info Col-0 whole seedlings Original data GEO bulk
83 BLM+INA 0.53 >More info 0.40 >More info CK BLM and INA seedling Original data
84 Col-Luc WT 3h antimycin A 0.55 >More info 0.38 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
85 irradiated leaf (cmt 1d) 0.55 >More info 0.37 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
86 hrpA 7h 0.42 >More info 0.50 >More info Mock 7h hrpA Original data GEO bulk
87 seedling h S Exp 0.35 >More info 0.57 >More info seedling -S Exp seedling Original data
88 CMV-WT 0.51 >More info 0.40 >More info Mock-At Aerial tissues Original data GEO bulk
89 rao2 H2O2 3h -0.53 >More info -0.38 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
90 dor drought 0.27 >More info 0.64 >More info WT drought Original data GEO bulk
91 Mutant siz1-3 (Drought) 0.56 >More info 0.34 >More info Col-0 (Drought) Original data GEO bulk
92 siz1-3 drought 0.56 >More info 0.34 >More info Col-0 drought Original data GEO bulk
93 Leafminer damaged seedlings 0.34 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
94 SPT4-R3 seedlings0 DAS 0.54 >More info 0.36 >More info Col-0 seedlings0 DAS seedlings Original data
95 oas-a1.1 Cd 24h 0.36 >More info 0.54 >More info Cd 24h root Shoot Original data GEO bulk
96 ein2-1 9 hpi A. brassicicola 0.61 >More info 0.29 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
97 DC3000 24h 0.31 >More info 0.59 >More info Mock 24h DC3000 Original data GEO bulk
98 Tsu -Fe 24h Roots 0.50 >More info 0.39 >More info Tsu +Fe 24h Roots Original data GEO bulk
99 RGA-GR-DEX 0.52 >More info 0.37 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
100 Tsu-1 -Fe 24h 0.50 >More info 0.39 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
101 Blue Light 4 h 0.37 >More info 0.52 >More info White Light 4 h Original data Light treatments
102 aox1a(line) MLD stressed 0.39 >More info 0.50 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
103 PBZ 0.32 >More info 0.57 >More info none PBZ Rosette Original data GEO bulk
104 WT 24H Cold 0.52 >More info 0.36 >More info WT control Original data GEO bulk
105 rao2 AntimycinA 3h -0.54 >More info -0.33 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
106 Bur-0-3h IAA 0.52 >More info 0.34 >More info Bur-0h IAA whole plant Original data GEO bulk
107 DFPM 0.56 >More info 0.30 >More info control Original data GEO bulk
108 cpr5 0.51 >More info 0.35 >More info WT(COL) Original data GEO bulk
109 ice1 control 0.36 >More info 0.50 >More info WT control Original data GEO bulk
110 cpr5npr1 0.57 >More info 0.29 >More info WT(COL) Original data GEO bulk
111 cpr5scv1 0.55 >More info 0.30 >More info WT(COL) Original data GEO bulk
112 dde2-2 9 hpi A. brassicicola 0.54 >More info 0.31 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
113 Col-0 norflurazon 0.54 >More info 0.31 >More info Col-0 control Original data GEO bulk
114 ataf1-1 mutant Col-0 Bgh inoculated 0.52 >More info 0.33 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
115 35S:RPS4 eds1-2 8h -0.50 >More info -0.35 >More info 35S:RPS4 8h leaves Original data
116 Leaf wounded 0.31 >More info 0.53 >More info Leaf control vegetative leaf Original data GEO bulk
117 gun1-9 norflurazon 0.57 >More info 0.27 >More info gun1-9 control Original data GEO bulk
118 anac017-1 AntimycinA 3h -0.57 >More info -0.26 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
119 msh1 stunt 0.50 >More info 0.32 >More info WT Col-0 above ground part of plant Original data GEO bulk
120 cpr5npr1svi1 0.51 >More info 0.31 >More info WT(COL) Original data GEO bulk
121 nia1nia2 0.53 >More info 0.29 >More info Col-0 whole seedlings Original data GEO bulk
122 rosette Dark Wounded 0.32 >More info 0.50 >More info rosette Dark Control Original data GEO bulk
123 pmr5 0.30 >More info 0.52 >More info Col-0 Original data GEO bulk
124 Col-0 under 4 days salt 0.51 >More info 0.30 >More info Col-0 under control 4 days salt treatment rosette Original data
125 shoots bhlh100/101 0uM Fe 0.51 >More info 0.30 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
126 essp4/sdg8-5 mutant 0.51 >More info 0.30 >More info wild type leaf Original data GEO bulk
127 WT mitomycin C 0.52 >More info 0.29 >More info WT mock shoot apical meristem Original data
128 Light 3day wt -0.54 >More info -0.27 >More info 0h wt Original data
129 Cor hrpS 10h 0.52 >More info 0.29 >More info Mock 10h Cor hrpS Original data GEO bulk
130 ARR21C-ox 0.66 >More info 0.15 >More info Col-0 Original data ARR21C overexpression
131 oligomycin 1 h 0.50 >More info 0.31 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
132 arf2 brz -0.53 >More info -0.28 >More info arf2 mock Original data GEO bulk
133 wrky33 Bc inoculation 14h 0.54 >More info 0.26 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
134 eds16 whole leaf 6hpi -0.15 >More info -0.65 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
135 Col-0 low oxygen 0.59 >More info 0.20 >More info Col-0 Original data GEO bulk
136 Laer pretreat GA Flg22 1h 0.08 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
137 anac017-1 H2O2 3h -0.54 >More info -0.24 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
138 atmospheric CO2 low Mg shoot 0.55 >More info 0.23 >More info atmospheric CO2 normal Mg shoot Shoot Original data
139 arf2 mock 0.51 >More info 0.26 >More info Col mock Original data GEO bulk
140 Mutant arf2 (etiol) 0.51 >More info 0.26 >More info Col (etiol) Original data GEO bulk
141 phr1 phl1 Root-Pi 0.56 >More info 0.21 >More info WT Shoot+Pi roots Original data GEO bulk
142 long 12-degree- 0.24 >More info 0.53 >More info control long Original data GEO bulk
143 Cold Stress 24 h (shoot) 0.50 >More info 0.26 >More info Stress mock 24 h (shoot) Original data Stress treatments
144 C24 ozone 0.51 >More info 0.24 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
145 ahg2-1abi1-1 0.55 >More info 0.20 >More info WT (Col) control Original data GEO bulk
146 gpa1-4/agb1-2 clean-air 3h -0.09 >More info -0.66 >More info Col clean-air 3h clean-air Original data GEO bulk
147 CT101 ozone 0.51 >More info 0.23 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
148 FOX line K16331 0.53 >More info 0.21 >More info empty vector control (T3) FOX lines Original data GEO bulk
149 atgsnor1-3-avrB-6h 0.61 >More info 0.13 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
150 long 17-degree- 0.21 >More info 0.53 >More info control long Original data GEO bulk
151 Kin SA -0.61 >More info -0.12 >More info Col-0 SA Original data GEO bulk
152 psae1-3 stn7-1 0.51 >More info 0.22 >More info WS rosette leaves Original data GEO bulk
153 SA 0.54 >More info 0.18 >More info WT mock Whole seedling Original data GEO bulk
154 Col-0 9 hpi A. brassicicola 0.52 >More info 0.19 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
155 sid2-2 9 hpi A. brassicicola 0.55 >More info 0.15 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
156 sid2-2 mock 0.59 >More info 0.11 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
157 TNT-seedlings 0.51 >More info 0.19 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
158 Col-0 wt Hypoxic 0.52 >More info 0.17 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
159 pGL1::GL1-GR Dex 4 hours -0.62 >More info -0.07 >More info pGL1::GL1-GR mock 4 hours Original data GEO bulk
160 Col-0 low oxygen 0.52 >More info 0.16 >More info Col-0 control low oxygen root Original data GEO bulk
161 hni9 high nitrogen 0.54 >More info 0.14 >More info WT high nitrogen roots Original data GEO bulk
162 IMI 4mM 0.50 >More info 0.18 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
163 cdkf:1-2 0.53 >More info 0.14 >More info wt seedling young seedlings Original data GEO bulk
164 Root -Cs 0.50 >More info 0.16 >More info Control-root Original data GEO bulk
165 TaFLS overexpression line (OE2) -0.50 >More info -0.16 >More info Col-0 Rosette leaves Original data
166 shoots bhlh100/101 100uM Fe 0.53 >More info 0.13 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
167 eds16 whole leaf 0h UI -0.13 >More info -0.53 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
168 Selenate (shoot) 0.52 >More info 0.13 >More info Ws (shoot) Original data GEO bulk
169 Shoot Selenate 0.52 >More info 0.13 >More info Shoot control 40 micromolar selenate Shoot Original data GEO bulk
170 OsTOP6B ox 0.58 >More info 0.07 >More info WT Original data GEO bulk
171 -Sulfate 24 h -0.09 >More info -0.55 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
172 ACC 3 h 0.13 >More info 0.50 >More info Mock 3 h Original data Basic hormone treatment of seedlings
173 gabaculin 0.51 >More info 0.11 >More info WT Col-0 seedling Original data GEO bulk
174 Nicotinamide-81hr 0.51 >More info 0.10 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
175 Inflorescences Trp1 0.08 >More info 0.51 >More info Inflorescences ler inflorescences Original data GEO bulk
176 agb1 -ABA LF -0.06 >More info -0.51 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
177 vte2 leaves 120h LT 0.52 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
178 IRP1-OE-Ctrl--shoot 0.51 >More info 0.04 >More info COL-0-Ctrl--shoot shoot Original data
179 SA 4mM 0.55 >More info -0.01 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
180 spch 0.51 >More info 0.02 >More info Col-0 WT whole seedling Original data GEO bulk
181 opr3 OPDA 2 h 0.01 >More info 0.52 >More info opr3 0 h Original data GEO bulk
182 seedling -S Exp 0.23 >More info -0.75 >More info seedling FN Exp seedling Original data
183 pvip1 pvip2 seedling 0.53 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
184 Heat shock optimum -0.14 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
185 siliques AtHb1 control -0.02 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
186 seed germinating in countinuous light 24h SL -0.17 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
187 CCA1-ox 6am non-polysomal -0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
188 IAA7mII over-expressor IAA Treated -0.22 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
189 shoot control pKAT1 -0.51 >More info 0.06 >More info shoot control total Original data GEO bulk
190 bri1-116 -0.30 >More info 0.73 >More info Col seedling Original data GEO bulk
191 harboring empty vector+CHX -0.53 >More info 0.16 >More info harboring empty vector+DEX +CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
192 Shoot apex inflorescence (after bolting) -0.31 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages