4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on tt4
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List of experiments correlated with "tt4"  Help Download transcriptome of top 30
Score Experiment Correlation from
tt4
Correlation to
tt4
Control Experiment Genotype Treatment Tissue Link to
original data
Experimental
Category
Data set
Details
1 tt4 1.00 >More info 1.00 >More info WT aerial region Original data GEO bulk
2 sng1 0.68 >More info 0.73 >More info WT aerial region Original data GEO bulk
3 Cor hrpS 10h -0.63 >More info -0.75 >More info Mock 10h Cor hrpS Original data GEO bulk
4 control leaf (cmt 1d) -0.70 >More info -0.60 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
5 cpr5npr1svi1 -0.59 >More info -0.68 >More info WT(COL) Original data GEO bulk
6 Cor 10h -0.68 >More info -0.56 >More info Mock 10h Cor Original data GEO bulk
7 rosettes atx drought -0.59 >More info -0.63 >More info rosettes atx watered Original data GEO bulk
8 stn7-1 0.58 >More info 0.63 >More info Col-0 rosette leaves Original data GEO bulk
9 ceh1 mutant -0.74 >More info -0.40 >More info Parent line Original data
10 psae1-3 0.68 >More info 0.45 >More info WS rosette leaves Original data GEO bulk
11 low water potential -0.57 >More info -0.56 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
12 WT 1wk -P -0.51 >More info -0.61 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
13 Mock pft1 leaf 0.41 >More info 0.70 >More info Mock Col-0 leaf water leaf Original data GEO bulk
14 Laer Flg22 1h -0.60 >More info -0.50 >More info Laer Control leaf discs Original data GEO bulk
15 cpr5 -0.43 >More info -0.67 >More info WT(COL) Original data GEO bulk
16 HopZ1a treated -0.54 >More info -0.55 >More info col Original data GEO bulk
17 Pto inoculated -0.61 >More info -0.48 >More info col Original data GEO bulk
18 cpr5npr1 -0.50 >More info -0.58 >More info WT(COL) Original data GEO bulk
19 tt4 UV 0.57 >More info 0.51 >More info UV aerial region Original data GEO bulk
20 cpr5scv1 -0.34 >More info -0.73 >More info WT(COL) Original data GEO bulk
21 Salt Stress 24 h (shoot) -0.50 >More info -0.57 >More info Stress mock 24 h (shoot) Original data Stress treatments
22 smg7b-1 -0.57 >More info -0.50 >More info WT whole plant Original data GEO bulk
23 WT no Pi -0.59 >More info -0.47 >More info WT complete seedlings Original data
24 phyB Dark 0.65 >More info 0.41 >More info WT(Ler) Dark Original data GEO bulk
25 seedlings by volatiles from leafminer damaged
Lima bean 48h
-0.66 >More info -0.38 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
26 bZIP1ko mutant N+Light- -0.43 >More info -0.61 >More info WT-sib N+Light- whole plant Original data GEO bulk
27 Compost -0.48 >More info -0.56 >More info Perlite Compost Original data GEO bulk
28 mutant-line409 -0.64 >More info -0.39 >More info WT-control whole plant Original data GEO bulk
29 phyAphyB Dark -0.63 >More info -0.39 >More info phyB Dark Original data GEO bulk
30 Light 3day wt 0.43 >More info 0.59 >More info 0h wt Original data
31 Col ozone 3h -0.52 >More info -0.49 >More info Col clean-air 3h ozone Original data GEO bulk
32 WT (Col-0) inflorescence well-watered day 10 0.62 >More info 0.39 >More info WT (Col-0) inflorescence well-watered day 0 Unopen flower buds Original data GEO bulk
33 K starvation (shoot) -0.44 >More info -0.57 >More info Ws (shoot) Original data GEO bulk
34 Col whole leaf 7dpi -0.43 >More info -0.58 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
35 pmr4-1 control -0.44 >More info -0.57 >More info WT control uninoculated Original data GEO bulk
36 Shoot -K -0.44 >More info -0.57 >More info Control-shoot Original data GEO bulk
37 35S:RPS4 eds1-2 8h 0.47 >More info 0.54 >More info 35S:RPS4 8h leaves Original data
38 vte2 leaves 48h LT -0.58 >More info -0.42 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
39 Osmotic Stress 24 h (shoot) -0.46 >More info -0.54 >More info Stress mock 24 h (shoot) Original data Stress treatments
40 eds16 whole leaf 5dpi 0.37 >More info 0.63 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
41 cs26 short-day 0.41 >More info 0.59 >More info Leaves-WT-SD leaf Original data GEO bulk
42 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light
0.67 >More info 0.32 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
43 Laer Flg22+GA 1h -0.54 >More info -0.45 >More info Laer Control leaf discs Original data GEO bulk
44 HopZ1a treated ulp1c ulp1d -0.52 >More info -0.47 >More info col Original data GEO bulk
45 Cold Stress 24 h (shoot) -0.54 >More info -0.45 >More info Stress mock 24 h (shoot) Original data Stress treatments
46 amiR-tor induced 6d -0.25 >More info -0.74 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
47 efr-1 +elf18 10h 0.44 >More info 0.55 >More info WT +elf18 10h elf18 Original data GEO bulk
48 pho1 -0.48 >More info -0.51 >More info Col2WT Original data GEO bulk
49 Elevated CO2 LIMITING N DAY -0.64 >More info -0.34 >More info Elevated CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
50 Col-0 INA 48h -0.38 >More info -0.60 >More info Col-0 MOCK 48h Original data GEO bulk
51 aerial organ callus inducing medium 12 h -0.50 >More info -0.47 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
52 prors1-2 leaves 0.64 >More info 0.33 >More info Col-0 leaves leaves Original data
53 msh1 albino -0.60 >More info -0.36 >More info WT aerial part Original data GEO bulk
54 Phaseolicola 2 h (leaf) -0.43 >More info -0.53 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
55 bri1-116 0.23 >More info 0.73 >More info Col seedling Original data GEO bulk
56 Elevated CO2 AMPLE N NIGHT -0.33 >More info -0.63 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
57 WT +elf18 10h -0.45 >More info -0.50 >More info WT untreated elf18 Original data GEO bulk
58 WT powdery mildew -0.41 >More info -0.54 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
59 oas-a1.1 Cd 24h -0.41 >More info -0.53 >More info Cd 24h root Shoot Original data GEO bulk
60 col-5 DC3000 12h -0.44 >More info -0.50 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
61 phyB mutant 22C 10hrs 0.39 >More info 0.54 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
62 D2O -0.34 >More info -0.59 >More info H2O seedling Original data GEO bulk
63 35S::PI ap3-3 35S::AP-GR +DEX -0.36 >More info -0.57 >More info 0hr DEX Original data GEO bulk
64 35S::KLU -0.35 >More info -0.58 >More info WT Shoot Original data
65 WT Rc50 0.56 >More info 0.36 >More info WT Dark red light whole seedling Original data GEO bulk
66 seedlings protease IV -0.38 >More info -0.54 >More info seedlings nontreated control whole seedling Original data
67 vte2-1 3d vernalization -0.51 >More info -0.41 >More info WT 3d vernalization Original data GEO bulk
68 aerial organ callus inducing medium 24h -0.50 >More info -0.42 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
69 erf104-ko Flg22 4h -0.42 >More info -0.50 >More info erf104-ko H2O 4h Original data GEO bulk
70 oxt6 mutant 0.41 >More info 0.51 >More info WT Original data GEO bulk
71 aerial organ callus inducing medium 96 h -0.52 >More info -0.39 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
72 sid2 0.25 >More info 0.66 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
73 35S:RPS4 eds1-2 24h 0.39 >More info 0.52 >More info 35S:RPS4 24h leaves Original data
74 AvrRpm1 2 h (leaf) -0.39 >More info -0.51 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
75 col-5 hrpA 12h -0.35 >More info -0.55 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
76 G3P 0.33 >More info 0.56 >More info Mock distal leaves Original data GEO bulk
77 psad1-1 stn7-1 0.53 >More info 0.36 >More info Col-0 rosette leaves Original data GEO bulk
78 ataf1-1 mutant Col-0 Bgh inoculated -0.39 >More info -0.50 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
79 gpa1 +ABA GC 0.35 >More info 0.53 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
80 glk1 glk2 GLK1-GR +DEX 4h 0.52 >More info 0.35 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
81 wrky33 Bc inoculation 14h -0.55 >More info -0.31 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
82 SCR-GR Time 12H Dex -0.52 >More info -0.34 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
83 mkk2 24h BTH rep -0.52 >More info -0.33 >More info Col-0 24h BTH rep Original data GEO bulk
84 grf1/grf2/grf3 -0.54 >More info -0.31 >More info WS Original data GEO bulk
85 spch 0.55 >More info 0.30 >More info Col-0 WT whole seedling Original data GEO bulk
86 PAHs stress -0.32 >More info -0.53 >More info exp control phenanthrene whole plants Original data GEO bulk
87 CMV-WT -0.30 >More info -0.55 >More info Mock-At Aerial tissues Original data GEO bulk
88 P.syringae vir 4 h (leaf) 0.53 >More info 0.31 >More info Mock 4 h (leaf) Original data Elicitor treatments
89 rGRF3x35S:GIF -0.29 >More info -0.55 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
90 Prohexadione 3 h -0.27 >More info -0.57 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
91 C2 leaf-drought -0.27 >More info -0.56 >More info C2 leaf-well watered Original data GEO bulk
92 seedlings-week-old RECA1-overexpressing
transgenic
-0.29 >More info -0.54 >More info seedlings-week-old Col-0 seedlings Original data
93 ataf1-1 mutant Col-0 Un-inoculated 0.50 >More info 0.32 >More info WT Col-0 Un-inoculated Original data GEO bulk
94 xyl-grown cell culture- 1h 1mM Fru -0.60 >More info -0.22 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
95 eif3h non-polysome -0.66 >More info -0.15 >More info WT non-polysome Original data GEO bulk
96 phr1 phl1 Root-Pi -0.54 >More info -0.27 >More info WT Shoot+Pi roots Original data GEO bulk
97 WT-16ºC -0.56 >More info -0.24 >More info WT-23ºC Original data GEO bulk
98 gpa1 -ABA LF -0.29 >More info -0.51 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
99 agb1 -ABA LF -0.16 >More info -0.64 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
100 downy mildew cotyledons late stage -0.22 >More info -0.58 >More info mock inoculated Cotyledons Original data GEO bulk
101 Full C2 T3 -0.54 >More info -0.25 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
102 CCA1-ox 6am non-polysomal 0.28 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
103 pmr4-1 powdery mildew -0.12 >More info -0.65 >More info WT powdery mildew uninoculated Original data GEO bulk
104 AvrRpt2 Col-0 6hpi -0.51 >More info -0.25 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
105 WT 1mM phosphate 8 hours. 0.22 >More info 0.54 >More info WT control (not supplemented). Original data
106 WT Bc inoculation 14h -0.51 >More info -0.24 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
107 hai1-2 -0.55 >More info -0.20 >More info control control whole seedlings Original data GEO bulk
108 MYB46-GR DEX -0.54 >More info -0.21 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
109 sid2-2 safener 0.17 >More info 0.57 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
110 cpr5 -0.21 >More info -0.53 >More info WT seedling Original data GEO bulk
111 sfr3 control -0.18 >More info -0.56 >More info WT control All aerial tissue Original data GEO bulk
112 S58-2 -0.18 >More info -0.56 >More info wt Original data GEO bulk
113 ein2 -0.52 >More info -0.21 >More info Col-0 Leaves Original data GEO bulk
114 gul2-1 bri1-5 mutant -0.51 >More info -0.22 >More info WT 7 day-old whole seedlings Original data
115 Full AC2 T2 -0.50 >More info -0.22 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
116 B.cinerea 18 h infection -0.18 >More info -0.54 >More info Mock 18 h Original data Botrytis cinerea infection
117 Botrytis cinerea 18h -0.18 >More info -0.54 >More info control 18h Original data GEO bulk
118 Red/FR Light 4 h -0.50 >More info -0.21 >More info FarRed Light 4 h Original data Light treatments
119 ABA 3 h -0.12 >More info -0.59 >More info Mock 3 h Original data Basic hormone treatment of seedlings
120 Mutant iaa17-6 (IAA) -0.13 >More info -0.58 >More info Col (IAA) Original data GEO bulk
121 sid2-1 cold 0.12 >More info 0.59 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
122 Col whole leaf 5dpi -0.16 >More info -0.54 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
123 Ambient CO2 LIMITING N DAY -0.61 >More info -0.09 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
124 eds16 whole leaf 7d UI 0.09 >More info 0.61 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
125 WT in -N -0.13 >More info -0.56 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
126 T6 leaf-drought -0.19 >More info -0.50 >More info T6 leaf-well watered Original data GEO bulk
127 AtMYB30-ox T0 0.05 >More info 0.63 >More info WT T0 Original data GEO bulk
128 Col-0 9 hpi A. brassicicola -0.13 >More info -0.55 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
129 psae1-3 stn7-1 0.60 >More info 0.08 >More info WS rosette leaves Original data GEO bulk
130 mbd11 mutant thaliana 10-day-old seedling -0.50 >More info -0.17 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
131 IAA Treated -0.51 >More info -0.16 >More info Negative Control Original data GEO bulk
132 Col BTH -0.00 >More info 0.67 >More info Col rosettes Original data GEO bulk
133 rcf1-1 cold 24h -0.14 >More info -0.51 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
134 NaCl Col -0.13 >More info -0.52 >More info Col Original data GEO bulk
135 Red/FR Light45min 0.08 >More info 0.57 >More info FarRed Light 45min Original data Light treatments
136 Split KNO3 roots - 2hours 0.08 >More info 0.56 >More info Split KCl roots - 2hours 5mM KNO3 on ONE side for 2 hours roots Original data GEO bulk
137 siliques AtHb1 control 0.12 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
138 Laer pretreat GA Flg22 1h -0.07 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
139 eds16 whole leaf 0h UI 0.04 >More info 0.58 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
140 S15-118 -0.05 >More info -0.56 >More info wt Original data GEO bulk
141 ASL9-ox 0.53 >More info 0.08 >More info WT aerial parts of seedlings Original data GEO bulk
142 E.orontii Infection 3 day -0.05 >More info -0.54 >More info Uninfection 3 day Original data Elicitor treatments
143 aba3-1 -0.08 >More info -0.51 >More info wt Original data GEO bulk
144 eif3h -0.51 >More info -0.07 >More info WT Original data GEO bulk
145 xyl-grown cell culture- 1h 1mM Glc -0.51 >More info -0.07 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
146 camta3-2 -0.04 >More info -0.54 >More info WT Original data GEO bulk
147 Col-0 DCA 6d 0.03 >More info -0.61 >More info Col-0 MOCK 6d Original data GEO bulk
148 eds16 whole leaf 6hpi 0.01 >More info 0.56 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
149 JA 0.52 >More info 0.04 >More info Col-0 mock Whole seedling Original data GEO bulk
150 CAX1/CAX3 mutant -0.06 >More info -0.50 >More info Col whole plant Original data GEO bulk
151 whole roots 140 mM NaCl 4 hour -0.00 >More info -0.56 >More info whole roots standard Original data GEO bulk
152 Blue Light 45 min -0.02 >More info -0.53 >More info White Light 45min Original data Light treatments
153 del1-1 mutant 5d uninfected -0.01 >More info -0.54 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
154 Mutant NahG(leaf) -0.00 >More info 0.54 >More info Col-0 (leaf) Original data GEO bulk
155 Base wox4 -0.63 >More info 0.10 >More info Base Col base of stem Original data GEO bulk
156 gpa1 -ABA GC -0.14 >More info 0.67 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
157 vte2 leaves 120h LT -0.57 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
158 Prohexadione 12 h 0.04 >More info -0.57 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
159 A6 mutant -0.01 >More info -0.51 >More info WT rosette leaves Rosette leaves Original data GEO bulk
160 Mutant clv3-7(shoot apex) 0.53 >More info -0.02 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
161 WT zebularine -0.51 >More info 0.00 >More info WT mock shoot apical meristem Original data
162 Heat shock optimum -0.15 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
163 OE WRKY63.3 high light 0.07 >More info -0.57 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
164 ani1 T0.5 -0.14 >More info 0.63 >More info WT T0.5 root tissue Original data GEO bulk
165 CLV3p cells -0.52 >More info 0.04 >More info Protoplast Induced Original data GEO bulk
166 WT (Ler) CK25 0.04 >More info -0.52 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
167 E.orontii Infection 6 h 0.51 >More info -0.05 >More info Uninfection 6 h Original data Elicitor treatments
168 seed germinating in countinuous light 24h SL -0.22 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
169 WT NAA 1h 0.08 >More info -0.53 >More info WT 0h Leaf tissue Original data GEO bulk
170 IAA7mII over-expressor IAA Treated -0.24 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
171 Col ozone 2d 0.09 >More info -0.53 >More info Col clean-air 2d ozone Original data GEO bulk
172 M6PR transgenic 100mM NaCl -0.50 >More info 0.06 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
173 rts1-5 0.55 >More info -0.12 >More info null-mutant whole plant Original data GEO bulk
174 Shoot apex inflorescence (after bolting) -0.24 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
175 35S::HRE2 Hypoxic 0.54 >More info -0.15 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
176 light 0.57 >More info -0.18 >More info dark light seedling Original data GEO bulk
177 gir flower 33d 0.50 >More info -0.12 >More info Col-7 flower 33d flower Original data GEO bulk
178 HS -0.51 >More info 0.15 >More info noneHS Original data GEO bulk
179 sni1 0.16 >More info -0.52 >More info WT Original data GEO bulk
180 A. lyrata -0.50 >More info 0.16 >More info A. thaliana mature leaves before flowering Original data GEO bulk
181 35S::CBF2 0.21 >More info -0.50 >More info Ws2 Original data GEO bulk
182 Col0-PsmES4326-24hpi -0.32 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
183 camta1/3 warm 0.32 >More info -0.60 >More info WT warm entire aerial part Original data GEO bulk
184 NJ15 -0.29 >More info 0.57 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
185 Octopus overexpressor 35SDYG25 0.33 >More info -0.55 >More info WS Original data GEO bulk
186 clf-28 -0.31 >More info 0.51 >More info Col whole plant Original data GEO bulk
187 Leafminer damaged seedlings -0.46 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk