4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Atape2 low light
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List of experiments correlated with "Atape2 low light"  Help Download transcriptome of top 30
Score Experiment Correlation from
Atape2 low light		 Correlation to
Atape2 low light		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Atape2 low light 1.00 >More info 1.00 >More info Control for tissue data shoot apical meristem Original data GEO bulk
2 KAN1 0.96 >More info 0.96 >More info Control for tissue data shoot apical meristem Original data GEO bulk
3 LAS 0.95 >More info 0.97 >More info Control for tissue data shoot apical meristem Original data GEO bulk
4 HMG 0.96 >More info 0.96 >More info Control for tissue data shoot apical meristem Original data GEO bulk
5 HDG4 0.94 >More info 0.96 >More info Control for tissue data shoot apical meristem Original data GEO bulk
6 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (8 dpg)		 0.90 >More info 0.93 >More info Control for tissue data Original data GEO bulk
7 Root from tip to 130 mm proximal to tip (cut
8dpg)		 0.90 >More info 0.93 >More info Control for tissue data Original data GEO bulk
8 AtHB8 0.92 >More info 0.91 >More info Control for tissue data shoot apical meristem Original data GEO bulk
9 Shoot apex transition (before bolting) 0.91 >More info 0.92 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
10 S17 0.92 >More info 0.91 >More info Control for tissue data shoot apical meristem Original data GEO bulk
11 lec1-1 24h post-fertilization Seed 0.91 >More info 0.91 >More info Control for tissue data Original data GEO bulk
12 ovule 0.91 >More info 0.91 >More info Control for tissue data ovule Original data GEO bulk
13 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (4dpg)		 0.90 >More info 0.92 >More info Control for tissue data Original data GEO bulk
14 Root from tip to 130 mm proximal to tip (cut
4dpg)		 0.90 >More info 0.92 >More info Control for tissue data Original data GEO bulk
15 Regenerating Stump Root Tip Cut 130 mm andn Recut
22 hrs Taking 70 mm of Stump (4dpg)		 0.90 >More info 0.92 >More info Control for tissue data Original data GEO bulk
16 Shoot apex vegetative 0.91 >More info 0.91 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
17 Regenerating Stump Root Tip Cut 130 mm andn Recut
13 hrs Taking 70 mm of Stump (4dpg)		 0.90 >More info 0.91 >More info Control for tissue data Original data GEO bulk
18 Bud 0.90 >More info 0.90 >More info Control for tissue data pollen grains and tubes Original data
19 Carpels stage15 0.90 >More info 0.90 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
20 Shoot apex vegetative &Young leaves 0.91 >More info 0.89 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
21 lec1-1 Globular Stage Seed 0.90 >More info 0.90 >More info Control for tissue data Original data GEO bulk
22 Flower (stage12) 0.90 >More info 0.90 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
23 Cells whole embryo 0.89 >More info 0.91 >More info Control for tissue data whole embryo Original data
24 Section Root from70 mm to 340 mm harvested
immediately		 0.89 >More info 0.91 >More info Control for tissue data Original data GEO bulk
25 Regenerating Stump Root Tip Cut 130 mm andn Recut
5 hrs Taking 70 mm of Stump (4dpg)		 0.89 >More info 0.91 >More info Control for tissue data Original data GEO bulk
26 Ambient CO2 leaf primordia 0.90 >More info 0.89 >More info Control for tissue data leaf primordia Original data
27 Inflorescences ler 0.89 >More info 0.90 >More info Control for tissue data inflorescences Original data GEO bulk
28 Rosette leaf No12 0.90 >More info 0.89 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
29 Hypocotyl 0.90 >More info 0.89 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
30 Nuclei proembryo 0.89 >More info 0.90 >More info Control for tissue data proembryo Original data
31 WT cotyledons 0.90 >More info 0.89 >More info Control for tissue data cotyledons Original data
32 unpollinated pistil 0.90 >More info 0.89 >More info Control for tissue data pistil Original data GEO bulk
33 Anther 0.90 >More info 0.89 >More info Control for tissue data anther Original data
34 Apex 5DAS 0.90 >More info 0.88 >More info Control for tissue data Original data GEO bulk
35 seed germinating in countinuous light 6 h SL 0.89 >More info 0.89 >More info Control for tissue data seed Original data GEO bulk
36 Mature roots 0.89 >More info 0.89 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
37 Pedicels stage15 0.90 >More info 0.88 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
38 lec1-1 Cotyledon Stage Seed 0.89 >More info 0.89 >More info Control for tissue data Original data GEO bulk
39 lec1-1 Mature Green Seed 0.89 >More info 0.89 >More info Control for tissue data Original data GEO bulk
40 lec1-1 Post-Mature Green Seed 0.89 >More info 0.89 >More info Control for tissue data Original data GEO bulk
41 Apex 14DAS 0.90 >More info 0.88 >More info Control for tissue data Original data GEO bulk
42 seed germinating in countinuous light 12 h SL 0.89 >More info 0.89 >More info Control for tissue data seed Original data GEO bulk
43 siliques 0.89 >More info 0.89 >More info Control for tissue data Original data GEO bulk
44 flowers 0.89 >More info 0.89 >More info Control for tissue data Original data GEO bulk
45 Ambient CO2 expanding leaf 0.89 >More info 0.89 >More info Control for tissue data expanding leaf Original data
46 torpedo-basal 0.88 >More info 0.90 >More info Control for tissue data torpedo embryo basal tissue Original data GEO bulk
47 Stem 1st node 0.89 >More info 0.88 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
48 Callus 0.89 >More info 0.88 >More info Control for tissue data callus Original data GEO bulk
49 Nuclei suspensor 0.88 >More info 0.89 >More info Control for tissue data suspensor Original data
50 Flowers stage15 0.89 >More info 0.88 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
51 Petiol (leaf7) 0.89 >More info 0.88 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
52 flower-buds 0.89 >More info 0.88 >More info Control for tissue data Original data GEO bulk
53 in vivo pollen tube 0.89 >More info 0.88 >More info Control for tissue data pollen tube Original data GEO bulk
54 seed germinating in countinuous light 48 h SL 0.88 >More info 0.89 >More info Control for tissue data seed Original data GEO bulk
55 Seeds stage3 with siliques 0.89 >More info 0.88 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
56 Expanding leaf 0.89 >More info 0.88 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
57 seedling 0.89 >More info 0.88 >More info Control for tissue data seedling Original data GEO bulk
58 seed germinating in countinuous light 1 h SL 0.88 >More info 0.88 >More info Control for tissue data seed Original data GEO bulk
59 lateral nectary stage 11-12 0.88 >More info 0.88 >More info Control for tissue data lateral nectaries Original data GEO bulk
60 torpedo-meristem 0.88 >More info 0.88 >More info Control for tissue data torpedo embryo meristem tissue Original data GEO bulk
61 cortex 0.87 >More info 0.89 >More info Control for tissue data cortex Original data GEO bulk
62 Proximalhalf (leaf7) 0.89 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
63 EL (leaves 1-2) 14DAS 0.89 >More info 0.87 >More info Control for tissue data Original data GEO bulk
64 flower 0.89 >More info 0.87 >More info Control for tissue data flower Original data GEO bulk
65 silique 0.89 >More info 0.87 >More info Control for tissue data silique Original data GEO bulk
66 phloem sieve cells and companion cells 0.88 >More info 0.88 >More info Control for tissue data phloem Original data GEO bulk
67 heart-stage-root 0.87 >More info 0.89 >More info Control for tissue data Original data GEO bulk
68 Ambient CO2 fully expanded leaf 0.88 >More info 0.88 >More info Control for tissue data fully expanded leaf Original data
69 Cotyledons 0.88 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
70 Leaf 0.88 >More info 0.87 >More info Control for tissue data leaf Original data GEO bulk
71 Petals stage15 0.88 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
72 seed during stratification 48 h S 0.87 >More info 0.88 >More info Control for tissue data seed Original data GEO bulk
73 Stem 2ndinternode 0.88 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
74 ML (Mature leaves) 35DAS 0.89 >More info 0.86 >More info Control for tissue data Original data GEO bulk
75 Rosette leaf No2 0.88 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
76 globular-apical 0.87 >More info 0.88 >More info Control for tissue data globular embryo apical tissue Original data GEO bulk
77 Senescing leaf 0.88 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
78 globular-basal 0.87 >More info 0.88 >More info Control for tissue data globular embryo basal tissue Original data GEO bulk
79 Cauline leaves 0.88 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
80 mature endodermis glcal 0.87 >More info 0.87 >More info Control for tissue data endodermis Original data GEO bulk
81 Seeds stage8 w/o siliques 0.88 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
82 Distal half (leaf7) 0.88 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
83 leaf 0.88 >More info 0.86 >More info Control for tissue data leaf Original data GEO bulk
84 Sepals stage15 0.87 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
85 root hair 0.86 >More info 0.87 >More info Control for tissue data root hairs Original data GEO bulk
86 median nectary stage 14-15 0.86 >More info 0.87 >More info Control for tissue data median nectaries Original data GEO bulk
87 lateral nectary stage 14-15 0.86 >More info 0.87 >More info Control for tissue data lateral nectaries Original data GEO bulk
88 Col dryseed 0.87 >More info 0.86 >More info Control for tissue data dry seeds Original data
89 embryo proper heart stage 0.86 >More info 0.87 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
90 heart-stage-cotyledon 0.86 >More info 0.87 >More info Control for tissue data Original data GEO bulk
91 differentiating xylem 0.86 >More info 0.86 >More info Control for tissue data xylem Original data GEO bulk
92 B5 +AA -0.87 >More info -0.85 >More info B5 -AA B5 media and treated with AA Original data
93 seed freshly harvested H 0.87 >More info 0.85 >More info Control for tissue data seed Original data GEO bulk
94 embryo proper 0.86 >More info 0.86 >More info Control for tissue data Original data GEO bulk
95 whole seeds 0.86 >More info 0.85 >More info Control for tissue data Original data GEO bulk
96 micropylar endosperm heart stage 0.85 >More info 0.86 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
97 Stamen stage15 0.86 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
98 QC 0.85 >More info 0.86 >More info Control for tissue data FACS-sorted protoplasts from roots Original data
99 seed during stratification 12 h S 0.87 >More info 0.84 >More info Control for tissue data seed Original data GEO bulk
100 NAA +AA -0.87 >More info -0.84 >More info NAA -AA B5 media supplemented with 4.5 µM NAA and treated with AA Original data
101 dry seed 0 h 0.87 >More info 0.84 >More info Control for tissue data seed Original data GEO bulk
102 whole seeds mature green 0.86 >More info 0.85 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
103 seed during stratification 1 h S 0.87 >More info 0.84 >More info Control for tissue data seed Original data GEO bulk
104 embryo proper mature green 0.85 >More info 0.85 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
105 peripheral endosperm heart stage 0.85 >More info 0.85 >More info Control for tissue data peripheral endosperm captured by LCM Original data GEO bulk
106 whole seeds heart stage 0.85 >More info 0.85 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
107 peripheral endosperm mature green 0.85 >More info 0.84 >More info Control for tissue data peripherial endosperm captured by LCM Original data GEO bulk
108 pericycle control 0.84 >More info 0.85 >More info Control for tissue data mock pericycle Original data GEO bulk
109 torpedo-root 0.85 >More info 0.84 >More info Control for tissue data Original data GEO bulk
110 chalazal seed coat mature green 0.85 >More info 0.84 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
111 seed coat heart stage 0.85 >More info 0.84 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
112 Mature pollen 0.85 >More info 0.84 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
113 chalazal seed coat 0.85 >More info 0.84 >More info Control for tissue data Original data GEO bulk
114 micropylar endosperm mature green 0.85 >More info 0.84 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
115 chalazal endosperm mature green 0.84 >More info 0.84 >More info Control for tissue data chalazal endosperm captured by LCM Original data GEO bulk
116 chalazal endosperm 0.84 >More info 0.84 >More info Control for tissue data Original data GEO bulk
117 epidermis control 0.84 >More info 0.84 >More info Control for tissue data mock epidermis Original data GEO bulk
118 intact root control 0.84 >More info 0.84 >More info Control for tissue data mock whole root Original data GEO bulk
119 Emwa1 inoculated psk 3 dpi 0.86 >More info 0.82 >More info Emwa1 inoculated WT 3 dpi Cotyledons Original data GEO bulk
120 seed coat 0.85 >More info 0.83 >More info Control for tissue data Original data GEO bulk
121 pollen 0.83 >More info 0.84 >More info Control for tissue data pollen grain Original data GEO bulk
122 peripherial endosperm 0.83 >More info 0.84 >More info Control for tissue data Original data GEO bulk
123 pskr1-5 0.85 >More info 0.81 >More info wild type Cotyledons Original data GEO bulk
124 in vitro pollen tube 0.83 >More info 0.82 >More info Control for tissue data pollen tube Original data
125 seed coat mature green 0.84 >More info 0.81 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
126 chalazal endosperm heart stage 0.82 >More info 0.82 >More info Control for tissue data chalazal endosperm captured by LCM Original data GEO bulk
127 seed germinating in countinuous light 24h SL 0.89 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
128 Shoot apex inflorescence (after bolting) 0.91 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
129 L17 phyA line -0.82 >More info -0.72 >More info WT seedling Original data GEO bulk
130 Salicylic Acid 3 h -0.85 >More info -0.52 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
131 chalazal seed coat heart stage 0.84 >More info 0.35 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
132 Nuclei whole embryo 0.89 >More info 0.10 >More info Control for tissue data whole embryo Original data
133 torpedo-apical 0.88 >More info 0.11 >More info Control for tissue data torpedo embryo apical tissue Original data GEO bulk
134 erf104-ko Flg22 4h -0.63 >More info -0.34 >More info erf104-ko H2O 4h Original data GEO bulk
135 Heat shock optimum 0.31 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
136 Starch sheath 2 days NAA 0.63 >More info 0.30 >More info Starch sheath T0 Stem starch sheath under NAA in vitro treatment before cell divission laser capture microdissection Original data GEO bulk
137 columella control 0.84 >More info 0.04 >More info Control for tissue data mock columella Original data GEO bulk
138 met1-3 fourth-selfed generation -0.24 >More info -0.64 >More info Col WT leaf Original data GEO bulk
139 Col BTH 0.17 >More info 0.67 >More info Col rosettes Original data GEO bulk
140 mpk6-ko H2O 4h 0.62 >More info 0.22 >More info Col-0 H2O 4h Original data GEO bulk
141 2h KNO3 Whole root 0.63 >More info 0.20 >More info 2h KCl control Whole root Whole root Original data GEO bulk
142 opr3 OPDA 0.5 h 0.15 >More info 0.68 >More info opr3 0 h Original data GEO bulk
143 chalazal endosperm linear-cotyledon -0.30 >More info -0.52 >More info whole seeds linear-cotyledon Original data GEO bulk
144 sex4-3 0.53 >More info 0.27 >More info Col-WT leaves Original data GEO bulk
145 C2H2 ZF TDNA mutant -0.54 >More info -0.25 >More info Col-WT mature pollen Original data GEO bulk
146 WT Atum 1h 0.54 >More info 0.24 >More info WT 0h Leaf tissue Original data GEO bulk
147 torpedo-cotyledon 0.87 >More info -0.09 >More info Control for tissue data Original data GEO bulk
148 2hr continuous KCl and MSX control PeR cell -0.28 >More info -0.50 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
149 Full C2 T2 -0.26 >More info -0.50 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
150 ptpks2 0.55 >More info 0.20 >More info Col-WT leaves Original data GEO bulk
151 Starch sheath 2 days MS incubation 0.52 >More info 0.22 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
152 red illumination +lincomycin 0.21 >More info 0.53 >More info red illumination -lincomycin Original data GEO bulk
153 sfr3 cold -0.61 >More info -0.12 >More info WT-cold aerial tissues Original data GEO bulk
154 bri1-116 -0.02 >More info 0.73 >More info Col seedling Original data GEO bulk
155 4C 1h 0.05 >More info 0.65 >More info 4C 0h Original data GEO bulk
156 Starch sheath 5 days MS incubation 0.51 >More info 0.19 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
157 met1-3 second-selfed generation -0.19 >More info -0.51 >More info Col WT leaf Original data GEO bulk
158 bZIP TDNA mutant -0.51 >More info -0.18 >More info Col-WT mature pollen Original data GEO bulk
159 WT roots - Fe -0.07 >More info -0.62 >More info WT roots + Fe Roots Original data GEO bulk
160 opr3 OPDA 8 h 0.16 >More info 0.52 >More info opr3 0 h Original data GEO bulk
161 3x(m) 0.09 >More info 0.58 >More info 2x two week old seedlings Original data
162 TNT-seedlings 0.06 >More info 0.60 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
163 siliques AtHb1 control 0.11 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
164 HSP90 Reduced RNAi-A3 -0.62 >More info 0.00 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
165 Laer pretreat GA Flg22 1h -0.09 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
166 Cs shoot -0.04 >More info -0.58 >More info control shoot Original data GEO bulk
167 CSP1 immonoprecipitated RNA 35S:HF-RPL18 cold -0.51 >More info -0.10 >More info CSP1 immonoprecipitated RNA 35S:HF-RPL18 12h cold (4C) rosettes Original data GEO bulk
168 Leafminer damaged seedlings 0.04 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
169 root longitudinal zone-1 -Fe -0.09 >More info -0.51 >More info root longitudinal zone-1 standard Original data GEO bulk
170 CDB1-Knockout -0.04 >More info -0.55 >More info WT Original data GEO bulk
171 A. halleri highZn-leaf -0.00 >More info -0.59 >More info A. petraea highZn-leaf Original data GEO bulk
172 Cocultivation 8 hrs leaf 0.53 >More info -0.02 >More info Mock cocultivation 8 hrs leaf Leaf Original data
173 CCA1-ox 6am non-polysomal 0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
174 35S::ERF104 H2O 4h 0.57 >More info -0.07 >More info Col-0 H2O 4h Original data GEO bulk
175 erf104-ko H2O 4h 0.56 >More info -0.07 >More info Col-0 H2O 4h Original data GEO bulk
176 root longitudinal zone-3 -Fe 0.05 >More info -0.54 >More info root longitudinal zone-3 standard Original data GEO bulk
177 2hr transitory KNO3 EPR cell -0.54 >More info 0.06 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
178 cngc19 0.53 >More info -0.06 >More info Col-0 root Original data GEO bulk
179 Red Light 45min 0.05 >More info -0.52 >More info White Light 45min Original data Light treatments
180 Col0-PsmES4326-24hpi -0.14 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
181 tcp13 -0.10 >More info 0.57 >More info WT inflorescences Original data GEO bulk
182 2hr continuous KNO3 PeR cell -0.50 >More info 0.04 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
183 WT Atum 2h 0.50 >More info -0.07 >More info WT 0h Leaf tissue Original data GEO bulk
184 cngc1-3 0.51 >More info -0.12 >More info Col-0 root Original data GEO bulk
185 IAA7mII over-expressor IAA Treated -0.31 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
186 Ba1 UV 0.53 >More info -0.19 >More info Ba1 mock UV seedling Original data