4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on SPT4-R3 seedlings0 DAS
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List of experiments correlated with "SPT4-R3 seedlings0 DAS"  Help Download transcriptome of top 30
Score Experiment Correlation from
SPT4-R3 seedlings0 DAS		 Correlation to
SPT4-R3 seedlings0 DAS		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 SPT4-R3 seedlings0 DAS 1.00 >More info 1.00 >More info Col-0 seedlings0 DAS seedlings Original data
2 Leaf GLU1-KO 0.68 >More info 0.63 >More info Leaf Col(0) rosette leaves Original data GEO bulk
3 20h Col-0 0.52 >More info 0.70 >More info 00h Col-0 Original data GEO bulk
4 csn3-1 light 0.61 >More info 0.60 >More info WT light Original data GEO bulk
5 ceh1 mutant 0.56 >More info 0.62 >More info Parent line Original data
6 RPL18 TuMV inoculated polysomal RNA 0.59 >More info 0.59 >More info mock inoculated polysomal RNA PO Original data GEO bulk
7 csn5 (csn5a-2 csn5b) light 0.61 >More info 0.56 >More info WT light Original data GEO bulk
8 Imidazolinone EC50 0.53 >More info 0.63 >More info Carrier (Imidazolinone) Original data GEO bulk
9 pnp1-1 3h +P 0.55 >More info 0.60 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
10 Col leaves 120h LT 0.55 >More info 0.60 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
11 RPL18 TuMV inoculated total RNA 0.56 >More info 0.58 >More info mock inoculated total RNA PO Original data GEO bulk
12 seedling 12h after Gamma atm-1 0.51 >More info 0.62 >More info seedling day 1 unirradiated atm-1 12h Original data
13 35S:LOB-GR mock 0.54 >More info 0.59 >More info Col mock mock seedling Original data GEO bulk
14 16h Col-0 0.54 >More info 0.59 >More info 00h Col-0 Original data GEO bulk
15 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.53 >More info 0.60 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
16 IAA 0.5 h -0.36 >More info -0.77 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
17 sta1 0.55 >More info 0.57 >More info WT Original data GEO bulk
18 seedling 12h after HZE atm-1 0.49 >More info 0.63 >More info seedling day 1 unirradiated atm-1 12h Original data
19 seedling 12h after Gamma WT 0.51 >More info 0.60 >More info seedling day 1 unirradiated WT 12h Original data
20 Col leaves 48h LT 0.53 >More info 0.57 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
21 pnp1-1 3h -P 0.53 >More info 0.57 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
22 Cd 24h root -0.44 >More info -0.65 >More info WT-Untreated Shoot Original data GEO bulk
23 Col-0 shade -0.34 >More info -0.75 >More info Col-0 light seedlings Original data GEO bulk
24 ice1 control 0.55 >More info 0.53 >More info WT control Original data GEO bulk
25 ice1 3H Cold 0.56 >More info 0.52 >More info WT 3H Cold Original data GEO bulk
26 WT powdery mildew 0.55 >More info 0.53 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
27 Mutant iaa5_6_19 0.48 >More info 0.60 >More info Col Original data GEO bulk
28 Shoot -Cs 0.44 >More info 0.64 >More info Control-shoot Original data GEO bulk
29 ice1 6H Cold 0.52 >More info 0.54 >More info WT 6H Cold Original data GEO bulk
30 sdg2 0.60 >More info 0.46 >More info wt seedling Original data GEO bulk
31 Col-7 Sucrose 0.49 >More info 0.56 >More info col-7 Original data GEO bulk
32 clf-28 swn-7 0.57 >More info 0.48 >More info Col whole plant Original data GEO bulk
33 cdpk6-yfp 0.47 >More info 0.58 >More info Kan seedlings Original data GEO bulk
34 eif3h 0.58 >More info 0.46 >More info WT Original data GEO bulk
35 Mutant cry1 (High Light) -0.52 >More info -0.52 >More info Col-0 (High Light) Original data GEO bulk
36 cry1 high light -0.52 >More info -0.52 >More info Col-O high light Original data GEO bulk
37 SLWF infested 0.39 >More info 0.65 >More info SLWF uninfested rosette tissue Original data GEO bulk
38 35S::PI ap3-3 35S::AP-GR +DEX 0.35 >More info 0.69 >More info 0hr DEX Original data GEO bulk
39 Col-0 48 hpi 0.52 >More info 0.51 >More info Col-0 uninoculated Original data GEO bulk
40 35S-MIF1 light grown 0.53 >More info 0.50 >More info Light-grown WT control Original data GEO bulk
41 FOX line K19624 0.45 >More info 0.58 >More info empty vector control (T3) FOX lines Original data GEO bulk
42 12h Col-0 0.48 >More info 0.55 >More info 00h Col-0 Original data GEO bulk
43 ASL9-ox -0.53 >More info -0.49 >More info WT aerial parts of seedlings Original data GEO bulk
44 Starch sheath 5 days MS incubation 0.41 >More info 0.61 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
45 apum23 0.44 >More info 0.57 >More info WT (Col-3) aerial parts Original data GEO bulk
46 WT cold 24h 0.36 >More info 0.65 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
47 gh3.5-1D 48 hpi 0.49 >More info 0.52 >More info Col-0 uninoculated Original data GEO bulk
48 sicy-192 cotyledons 0.47 >More info 0.54 >More info WT cotyledons cotyledons Original data
49 toc1-1-77hr 0.50 >More info 0.50 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
50 eif3h polysome 0.54 >More info 0.46 >More info WT polysome Original data GEO bulk
51 Mutant arf19-1 0.45 >More info 0.55 >More info Col Original data GEO bulk
52 abi4 vtc2 (I) 0.53 >More info 0.46 >More info Col (I) rosette Original data GEO bulk
53 Stem tissue 2 days NAA 0.36 >More info 0.63 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
54 ice1 24H Cold 0.43 >More info 0.56 >More info WT 24H Cold Original data GEO bulk
55 Elevated CO2 AMPLE N DAY 0.48 >More info 0.51 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
56 35S:LOB-GR DEX 0.50 >More info 0.48 >More info Col DEX dexamethasone seedling Original data GEO bulk
57 csn4-1 dark 0.50 >More info 0.48 >More info WT light Original data GEO bulk
58 B.cinerea 18 h infection 0.47 >More info 0.51 >More info Mock 18 h Original data Botrytis cinerea infection
59 WT cold 0.48 >More info 0.50 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
60 Botrytis cinerea 18h 0.47 >More info 0.51 >More info control 18h Original data GEO bulk
61 AvrRpt2 Col-0 6hpi 0.46 >More info 0.52 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
62 Sulfometuron EC50 0.50 >More info 0.47 >More info Carrier Original data GEO bulk
63 dor drought 0.29 >More info 0.68 >More info WT drought Original data GEO bulk
64 sni1 0.40 >More info 0.57 >More info WT Original data GEO bulk
65 seedling 12h after HZE WT 0.46 >More info 0.51 >More info seedling day 1 unirradiated WT 12h Original data
66 ARR21C-ox 0.56 >More info 0.40 >More info Col-0 Original data ARR21C overexpression
67 sicy-192 gun1-101 cotyledons 0.51 >More info 0.45 >More info WT cotyledons cotyledons Original data
68 PAHs stress 0.44 >More info 0.52 >More info exp control phenanthrene whole plants Original data GEO bulk
69 Col BTH 0.28 >More info 0.67 >More info Col rosettes Original data GEO bulk
70 JMJ24 knockout 0.54 >More info 0.41 >More info WT Original data GEO bulk
71 piffq FR 1h 0.51 >More info 0.43 >More info WT FR 1h whole seedling Original data GEO bulk
72 Glyphosate EC50 0.52 >More info 0.42 >More info Carrier (Glyphosate) Original data GEO bulk
73 UV Stress 24 h (shoot) 0.42 >More info 0.52 >More info Stress mock 24 h (shoot) Original data Stress treatments
74 short 17-degree- 0.31 >More info 0.63 >More info control short Original data GEO bulk
75 npr1 sni1 ssn2 SA 0.42 >More info 0.52 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
76 Col0-PsmES4326-24hpi 0.32 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
77 Norflurazon 0.38 >More info 0.54 >More info Col-0 Original data GEO bulk
78 Starch sheath 2 days MS incubation 0.37 >More info 0.55 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
79 Norflurazon 0.38 >More info 0.54 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
80 35S-MIF1 dark grown 0.42 >More info 0.50 >More info Dark-grown WT control Original data GEO bulk
81 D2O 0.41 >More info 0.51 >More info H2O seedling Original data GEO bulk
82 Mature callus 0.41 >More info 0.51 >More info Young callus hypocotyls Original data GEO bulk
83 AZC 0.50 >More info 0.41 >More info noneHS Original data GEO bulk
84 WT cold 12 h 0.33 >More info 0.58 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
85 eif3h non-polysome 0.52 >More info 0.38 >More info WT non-polysome Original data GEO bulk
86 Mutant sav3-2 (SH) 0.37 >More info 0.53 >More info Col-0 (SH) Original data GEO bulk
87 msh1 recA3 heat shock 0.36 >More info 0.54 >More info WT heat shock above-ground parts Original data GEO bulk
88 cop1 Seedling BL+ABA 0.39 >More info 0.51 >More info WT Seedling BL+ABA Original data GEO bulk
89 sav3-2 shade 0.37 >More info 0.53 >More info Col-0 shade seedlings Original data GEO bulk
90 seedling 24h after Gamma WT 0.39 >More info 0.51 >More info seedling day 2 unirradiated WT 24h Original data
91 Heat shock optimum 0.24 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
92 Botrytis cinerea 48h 0.38 >More info 0.51 >More info control 48h Original data GEO bulk
93 camta1 leaf drought -0.34 >More info -0.54 >More info Col-0 leaf drought leaf Original data GEO bulk
94 sfr3 control 0.27 >More info 0.61 >More info WT control All aerial tissue Original data GEO bulk
95 Stem tissue 5 days NAA 0.32 >More info 0.55 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
96 Laer pretreat GA Flg22 1h 0.16 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
97 aerial organ callus inducing medium 96 h 0.37 >More info 0.50 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
98 seed germinating in countinuous light 24h SL 0.19 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
99 IAA 1 h -0.23 >More info -0.63 >More info Mock 1 h Original data Basic hormone treatment of seedlings
100 Mutant lwd1_lwd2 0.25 >More info 0.61 >More info Wildtype for phy mutants Original data GEO bulk
101 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.25 >More info 0.61 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
102 pif4pif5 high R/FR 0.29 >More info 0.56 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
103 E2Fa-Dpa 0.32 >More info 0.53 >More info WT Original data GEO bulk
104 control leaf (cmt 5d) 0.24 >More info 0.61 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
105 aba3-1 0.35 >More info 0.50 >More info wt Original data GEO bulk
106 pif5 high R/FR 0.17 >More info 0.66 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
107 S15-118 0.31 >More info 0.52 >More info wt Original data GEO bulk
108 Red Light 45min -0.22 >More info -0.61 >More info White Light 45min Original data Light treatments
109 Blue Light 4 h 0.26 >More info 0.56 >More info White Light 4 h Original data Light treatments
110 Leafminer damaged seedlings 0.26 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
111 FarRed Light 45min -0.23 >More info -0.59 >More info White Light 45min Original data Light treatments
112 brm-101 0.29 >More info 0.52 >More info Ler Original data GEO bulk
113 Mutant cry1 -0.52 >More info -0.28 >More info Col-0 Original data GEO bulk
114 cry1 low light -0.52 >More info -0.28 >More info Col-O low light Original data GEO bulk
115 dde2-2 24hpi A. brassicicola -0.26 >More info -0.54 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
116 short 12-degree- 0.23 >More info 0.57 >More info control short Original data GEO bulk
117 Shoot apex inflorescence (after bolting) 0.14 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
118 GR-bdl DEX IAA 0.19 >More info 0.60 >More info GR-bdl IAA Original data GEO bulk
119 Light 0.5h steady-state 0.27 >More info 0.52 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
120 CCA14 dark late -0.22 >More info -0.57 >More info Col dark late Original data GEO bulk
121 WT NAA 2h -0.12 >More info -0.64 >More info WT 0h Leaf tissue Original data GEO bulk
122 bri1-116 0.02 >More info 0.73 >More info Col seedling Original data GEO bulk
123 Seedling KUA1-IOX est 0.21 >More info 0.53 >More info Seedling KUA1-IOX mock Original data
124 WT NAA 1h -0.17 >More info -0.56 >More info WT 0h Leaf tissue Original data GEO bulk
125 short 8-degree- 0.18 >More info 0.55 >More info control short Original data GEO bulk
126 35S::MBF1c -0.22 >More info -0.51 >More info control Original data GEO bulk
127 3x(p) -0.21 >More info -0.52 >More info 2x two week old seedlings Original data
128 rosette Dark Wounded 0.17 >More info 0.54 >More info rosette Dark Control Original data GEO bulk
129 ein2-1 24hpi A. brassicicola -0.18 >More info -0.53 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
130 Whole root - low pH 48H 0.17 >More info 0.51 >More info Whole root - Std pH 48H pH 4.6 for 48 hr Original data GEO bulk
131 35SAvr 0.09 >More info 0.57 >More info Ecotype Col Original data GEO bulk
132 3x(m) -0.08 >More info -0.57 >More info 2x two week old seedlings Original data
133 pad4-est1b-1-doublemutant 0.50 >More info 0.13 >More info pad4-mutant developed rosette leaves Original data GEO bulk
134 root longitudinal zone-1 -Fe -0.12 >More info -0.51 >More info root longitudinal zone-1 standard Original data GEO bulk
135 siliques AtHb1 control 0.11 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
136 CCA1-ox 6am non-polysomal 0.07 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
137 pvip1 pvip2 seedling 0.60 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
138 red illumination +lincomycin 0.05 >More info 0.52 >More info red illumination -lincomycin Original data GEO bulk
139 IAA7mII over-expressor IAA Treated -0.12 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
140 ptpks2 0.01 >More info 0.54 >More info Col-WT leaves Original data GEO bulk
141 Full C2 T3 0.01 >More info -0.56 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
142 2hr transitory KNO3 ECR cell 0.00 >More info 0.51 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk