4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Root wt CLE10
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List of experiments correlated with "Root wt CLE10"  Help Download transcriptome of top 30
Score Experiment Correlation from
Root wt CLE10		 Correlation to
Root wt CLE10		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Root wt CLE10 1.00 >More info 1.00 >More info Root wt CLE25 root tip Original data GEO bulk
2 Leafminer damaged seedlings 0.51 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
3 Cs shoot -0.59 >More info -0.42 >More info control shoot Original data GEO bulk
4 WT +Pep2 2h 0.63 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
5 Osmotic Stress 24 h (root) 0.62 >More info 0.36 >More info Stress mock 24 h (root) Original data Stress treatments
6 eto1-4 0.68 >More info 0.29 >More info Col-0 whole seedling Original data GEO bulk
7 CMV-A2b mutant 0.63 >More info 0.33 >More info Mock-At Aerial tissues Original data GEO bulk
8 root longitudinal zone-2 -Fe 0.43 >More info 0.53 >More info root longitudinal zone-2 standard Original data GEO bulk
9 seed germinating in countinuous light 24h SL 0.29 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
10 Shoot apex inflorescence (after bolting) 0.27 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
11 Phytoprostane A1 4 h 0.58 >More info 0.34 >More info Col-0 Original data GEO bulk
12 AFB1 flg22 1h 0.73 >More info 0.19 >More info WT 0h Leaf tissue Original data GEO bulk
13 35S:miR396 0.25 >More info 0.66 >More info WT 0 days-old seedlings. Original data GEO bulk
14 pepr1-1 Pepr2-3 +Pep2 2h -0.61 >More info -0.30 >More info WT +Pep2 2h Pep2 Original data GEO bulk
15 WT+chitooctaose 0.61 >More info 0.30 >More info WT+water chitooctaose seedlings Original data GEO bulk
16 seedlings-week-old RECA1-overexpressing
transgenic		 0.68 >More info 0.22 >More info seedlings-week-old Col-0 seedlings Original data
17 SCR-GR Time 1H Dex 0.38 >More info 0.52 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
18 WT+H2O2 0.63 >More info 0.26 >More info WT H2O2 Original data GEO bulk
19 bri1-116 0.16 >More info 0.73 >More info Col seedling Original data GEO bulk
20 root cells stele 140mM NaCl 20 hours 0.58 >More info 0.31 >More info root cells stele standard 1 hour root cells stele Original data
21 pepr1-1 Pepr2-3 +Pep2 10h -0.59 >More info -0.30 >More info WT +Pep2 10h Pep2 Original data GEO bulk
22 Col-0 under 4 days salt 0.55 >More info 0.32 >More info Col-0 under control 4 days salt treatment rosette Original data
23 Salt Stress 24 h (root) 0.60 >More info 0.27 >More info Stress mock 24 h (root) Original data Stress treatments
24 plant (Col-0) 4h OPDA 0.56 >More info 0.30 >More info plant (Col-0) 4h control Original data GEO bulk
25 OPDA 4 h 0.56 >More info 0.30 >More info Col-0 Original data GEO bulk
26 hrpA fliC 7h 0.58 >More info 0.28 >More info Mock 7h hrpA fliC Original data GEO bulk
27 (Col-0)+200 uM As 0.61 >More info 0.25 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
28 myb3 myb3r4d 0.33 >More info 0.51 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
29 AFB1 flg22 2h 0.62 >More info 0.22 >More info WT 0h Leaf tissue Original data GEO bulk
30 root cells stele 140mM NaCl 8 hours 0.53 >More info 0.30 >More info root cells stele standard 1 hour root cells stele Original data
31 Col in Pi deficiency medium 0.68 >More info 0.15 >More info Col in control medium root Original data GEO bulk
32 35S:CDO1 normoxia 0.51 >More info 0.32 >More info WT normoxia normoxia whole rosette Original data
33 miR393 flg22 1h 0.66 >More info 0.17 >More info WT 0h Leaf tissue Original data GEO bulk
34 root protophloem 40 mM NaCl 0.66 >More info 0.17 >More info root protophloem Original data GEO bulk
35 Ts5 roots 2hr KNO3 nitrogen 0.66 >More info 0.17 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
36 TNT-seedlings 0.33 >More info 0.50 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
37 estradiole-induced ANAC059 -0.53 >More info -0.29 >More info transgenic (empty vector inducible system) Original data GEO bulk
38 triplod male excess -0.52 >More info -0.30 >More info tetraploid Original data GEO bulk
39 CMV-WT 0.60 >More info 0.22 >More info Mock-At Aerial tissues Original data GEO bulk
40 rosette leaves fdh 0.61 >More info 0.21 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
41 coi1-2 0.56 >More info 0.25 >More info Col-0 mock Whole seedling Original data GEO bulk
42 PIF5ox high R/FR 0.53 >More info 0.28 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
43 GST 4 h (leaf) 0.56 >More info 0.25 >More info Mock 4 h (leaf) Original data Elicitor treatments
44 root longitudinal zone-1 -Fe 0.25 >More info 0.56 >More info root longitudinal zone-1 standard Original data GEO bulk
45 ABA JA 24h 0.25 >More info 0.56 >More info EtOH 24h 24hr Original data GEO bulk
46 opr3 JA 0.5 h 0.20 >More info 0.61 >More info opr3 0 h Original data GEO bulk
47 scrm-D 0.60 >More info 0.20 >More info Col-0 WT whole seedling Original data GEO bulk
48 naxillin 3h 0.65 >More info 0.15 >More info before treatment naxillin root Original data GEO bulk
49 Mutant arf19-1 (IAA) -0.57 >More info -0.23 >More info Col (IAA) Original data GEO bulk
50 Laer pretreat GA Flg22 1h 0.09 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
51 Elevated CO2 LIMITING N DAY 0.51 >More info 0.28 >More info Elevated CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
52 Methyl Jasmonate 1 h 0.55 >More info 0.24 >More info Mock 1 h Original data Basic hormone treatment of seedlings
53 SQ8 roots 2hr KCl control 0.66 >More info 0.13 >More info Col0 roots 2hr KCl control root Original data GEO bulk
54 Col BTH 0.12 >More info 0.67 >More info Col rosettes Original data GEO bulk
55 WT +elf18 2h 0.63 >More info 0.15 >More info WT untreated elf18 Original data GEO bulk
56 root cells stele 140mM NaCl 32 hours 0.53 >More info 0.25 >More info root cells stele standard 1 hour root cells stele Original data
57 GST NPP1 4 h (leaf) 0.55 >More info 0.23 >More info Mock 4 h (leaf) Original data Elicitor treatments
58 npr1 sni1 ssn2 -0.53 >More info -0.25 >More info npr1 sni1 water water seedling Original data GEO bulk
59 (Col-0)+100 uM As 0.53 >More info 0.25 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
60 chito-octamer 0.57 >More info 0.21 >More info Col Mock Original data GEO bulk
61 Mutant axr3-1 (IAA) 0.50 >More info 0.27 >More info Col (IAA) Original data GEO bulk
62 Col0-PsmES4326-24hpi 0.16 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
63 seedlings protease IV 0.57 >More info 0.19 >More info seedlings nontreated control whole seedling Original data
64 WT chitooctaose 0.66 >More info 0.10 >More info WT water Original data GEO bulk
65 Heat 2 days recovery 0.68 >More info 0.08 >More info Mock 2 days recovery seedling Original data GEO bulk
66 A2hsfa1-ox in quadruple mutant -0.59 >More info -0.16 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
67 spx1 spx2 complete 0.60 >More info 0.15 >More info WT complete seedlings Original data
68 msg2-BR -0.53 >More info -0.21 >More info BR BR dark-grown seedlings Original data GEO bulk
69 Ts5 roots 2hr KCl control 0.56 >More info 0.18 >More info Col0 roots 2hr KCl control root Original data GEO bulk
70 aux1 mutant roots ethylene 0.12 >More info 0.62 >More info roots air Original data GEO bulk
71 CMP 4hr 0.53 >More info 0.20 >More info Acetone 4hr root Original data GEO bulk
72 WT +Pep2 10h 0.70 >More info 0.03 >More info WT untreated Pep2 Original data GEO bulk
73 WT flg22 1h 0.56 >More info 0.16 >More info WT 0h Leaf tissue Original data GEO bulk
74 cpr5scv1 0.50 >More info 0.22 >More info WT(COL) Original data GEO bulk
75 Dark 2day hml 0.53 >More info 0.19 >More info 0h hml Original data
76 Flagellin 4 h (leaf) 0.52 >More info 0.20 >More info Mock 4 h (leaf) Original data Elicitor treatments
77 WT Seedling BL+ABA 0.55 >More info 0.16 >More info WT Seedling BL Original data GEO bulk
78 root cells endodermis 140mM NaCl 32 hours 0.52 >More info 0.19 >More info root cells endodermis standard 1 hour root cells endodermis Original data
79 Whole root - S 72H 0.66 >More info 0.04 >More info Whole root - S 0H Original data GEO bulk
80 AFB1 0h 0.53 >More info 0.17 >More info WT 0h Leaf tissue Original data GEO bulk
81 root - 08% oxygen - 2h 0.20 >More info 0.50 >More info root - 21% oxygen - 2h Original data GEO bulk
82 NFA8 roots 2hr KNO3 nitrogen 0.57 >More info 0.12 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
83 root control pCO2 -0.57 >More info -0.12 >More info root control total control root Original data GEO bulk
84 rpoTmp(line) untreated 0.54 >More info 0.14 >More info WT(Col0) untreated (control rpoTmp) leaf Original data
85 ceh1 mutant 0.51 >More info 0.17 >More info Parent line Original data
86 AtLysM RLK1 mutant chitooctaose -0.50 >More info -0.18 >More info WT chitooctaose Original data GEO bulk
87 TAMM27 roots 2hr KNO3 nitrogen 0.57 >More info 0.11 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
88 Elevated CO2 leaf primordia -0.60 >More info -0.08 >More info Ambient CO2 leaf primordia leaf primordia Original data
89 aerial organ callus inducing medium 12 h 0.62 >More info 0.05 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
90 Leafminer locally damaged thaliana seedlings 0.51 >More info 0.16 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
91 Dark 3day hml 0.51 >More info 0.16 >More info 0h hml Original data
92 SOS1 0mM NaCl 0.51 >More info 0.15 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
93 mutant acs6E (single mutant) -0.53 >More info -0.13 >More info col control (single mutant) Original data GEO bulk
94 root cap pGL2(root cap pGL2BRI1) 0h BL 0.53 >More info 0.12 >More info WR 35S 0h BL brassinosteroid root Original data
95 Pst-DC3000(avrRpm1)-4hpi 0.54 >More info 0.11 >More info Pst-DC3000-4hpi Original data GEO bulk
96 Col light-dark EtOH -0.61 >More info -0.04 >More info Col light-dark Mock 2.5% ethanol Original data GEO bulk
97 NFA8 roots 2hr KCl control 0.53 >More info 0.12 >More info Col0 roots 2hr KCl control root Original data GEO bulk
98 Kas2 roots 2hr KCl control 0.58 >More info 0.07 >More info Col0 roots 2hr KCl control root Original data GEO bulk
99 chl1-5 Nitrate 0.5h 0.08 >More info 0.57 >More info WT Nitrate 0.5h Original data GEO bulk
100 eds16 whole leaf 5dpi -0.55 >More info -0.09 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
101 2hr continuous KNO3 and MSX and Gln PeR cell -0.54 >More info -0.10 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
102 WT-SA 0.52 >More info 0.12 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
103 2hr continuous KCl and MSX control PeR cell 0.54 >More info 0.10 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
104 Phaseolicola 2 h (leaf) 0.50 >More info 0.12 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
105 protoplasts T0 [flg22] -0.57 >More info -0.05 >More info protoplasts T0 [CPK] mesophyll protoplasts Original data GEO bulk
106 GO5; 0h switch to ambient CO2 concentrations; -0.59 >More info -0.03 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
107 siliques AtHb1 control 0.10 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
108 xyl-grown cell culture- 1h 1mM Suc -0.11 >More info -0.51 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
109 aerial organ callus inducing medium 24h 0.55 >More info 0.06 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
110 ice1 3H Cold 0.52 >More info 0.09 >More info WT 3H Cold Original data GEO bulk
111 SQ8 roots 2hr KNO3 nitrogen 0.51 >More info 0.10 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
112 Shoot P recovery 0.55 >More info 0.04 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
113 Ler 10C long-day -0.61 >More info 0.02 >More info Ler 20C long-day seeds Original data GEO bulk
114 WT +elf18 10h 0.56 >More info 0.01 >More info WT untreated elf18 Original data GEO bulk
115 rao2 H2O2 3h -0.58 >More info 0.01 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
116 rosette leaves lcr 0.58 >More info -0.01 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
117 columella control 0.52 >More info 0.04 >More info Control for tissue data mock columella Original data GEO bulk
118 Section Root from70 mm to 340 mm harvested
immediately		 0.56 >More info -0.02 >More info Control for tissue data Original data GEO bulk
119 psae1-3 stn7-1 0.51 >More info 0.01 >More info WS rosette leaves Original data GEO bulk
120 short 14-degree- 0.62 >More info -0.10 >More info control short Original data GEO bulk
121 Ambient CO2 LIMITING N DAY 0.51 >More info 0.01 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
122 Heat shock optimum -0.13 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
123 WT Atum 2h 0.56 >More info -0.05 >More info WT 0h Leaf tissue Original data GEO bulk
124 epidermis control 0.57 >More info -0.06 >More info Control for tissue data mock epidermis Original data GEO bulk
125 php -0.51 >More info 0.01 >More info WT Original data GEO bulk
126 chl1-5 untreated -0.53 >More info 0.05 >More info WT untreated Original data GEO bulk
127 HairpinZ 4 h (leaf) 0.51 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
128 Mutant hy5 (High Light) -0.50 >More info 0.02 >More info Col-0 (High Light) Original data GEO bulk
129 WT resupplied Pi 4h 0.51 >More info -0.03 >More info WT complete seedlings Original data
130 hy5 high light -0.50 >More info 0.02 >More info Col-O high light Original data GEO bulk
131 Laer GA 1h -0.08 >More info 0.55 >More info Laer Control leaf discs Original data GEO bulk
132 Regenerating Stump Root Tip Cut 130 mm andn Recut
13 hrs Taking 70 mm of Stump (4dpg)		 0.50 >More info -0.03 >More info Control for tissue data Original data GEO bulk
133 P-chlorophenoxy- isobutyric acid 3 h -0.03 >More info 0.50 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
134 SCR-GR Time 6H Dex 0.55 >More info -0.11 >More info SCR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
135 root cells -Fe 0.52 >More info -0.08 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
136 short 10-degree- 0.50 >More info -0.10 >More info control short Original data GEO bulk
137 miR PSTDC3000 24h -0.51 >More info 0.11 >More info Col PSTDC3000 24h Leaf Original data GEO bulk
138 rgs1+no sugars -0.51 >More info 0.13 >More info WT+no sugars rosette leaves Original data GEO bulk
139 CCA1-ox 6am non-polysomal -0.14 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
140 iron minus 6 h -0.57 >More info 0.22 >More info iron +6 h root Original data GEO bulk
141 bbx24 in With Light 0.54 >More info -0.27 >More info WT in With Light light seedling Original data
142 glk1 glk2 GLK1-GR +DEX 24h -0.52 >More info 0.35 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
143 akt1-1 -0.51 >More info 0.34 >More info Ws-2 Seedlings Original data GEO bulk
144 IAA7mII over-expressor IAA Treated -0.52 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk