4.0:Analysis result - correlation network
Home
Method
Manual
History
Module-based correlation network(MCN) centered on lug3 leaves
> How to read results
Simple
All
>>Show Interactive view (test)
List of experiments correlated with "lug3 leaves"
Download transcriptome of top 30
Score
Experiment
Correlation from
lug3 leaves
Correlation to
lug3 leaves
Control Experiment
Genotype
Treatment
Tissue
Link to
original data
Experimental
Category
Data set
Details
1
lug3 leaves
1.00
>More info
1.00
>More info
WT-leaves
matured rosette leaves
Original data
GEO bulk
2
rpoTmp(line) MLD stressed
-0.75
>More info
-0.78
>More info
WT(Col0) MLD stressed (control rpoTmp)
leaf
Original data
3
rosettes drought
-0.77
>More info
-0.64
>More info
rosettes watered
Original data
GEO bulk
4
aox1a(line) untreated
0.66
>More info
0.74
>More info
WT(Col0) untreated (control aox1a)
leaf
Original data
5
Dry late day
-0.69
>More info
-0.68
>More info
Wet late day
water-limited
whole rosette
Original data
GEO bulk
6
nas4x leaves - Fe
0.71
>More info
0.65
>More info
WT leaves - Fe
Leaves
Original data
GEO bulk
7
Col-0 leaf drought
-0.67
>More info
-0.67
>More info
Col-0 leaf water
leaf
Original data
GEO bulk
8
aox1a(line) MLD stressed
-0.65
>More info
-0.69
>More info
WT(Col0) MLD stressed (control aox1a)
leaf
Original data
9
coi1
-0.71
>More info
-0.62
>More info
Col-0
Leaves
Original data
GEO bulk
10
Dry pre-dawn
-0.53
>More info
-0.77
>More info
Wet pre-dawn
water-limited
whole rosette
Original data
GEO bulk
11
des1 water
-0.69
>More info
-0.61
>More info
WT water
water
leaf
Original data
GEO bulk
12
nhx5-2/nhx6
-0.66
>More info
-0.61
>More info
WT
Rosette leaf
Original data
GEO bulk
13
rosettes atx drought
-0.73
>More info
-0.54
>More info
rosettes atx watered
Original data
GEO bulk
14
T8 leaf-drought
-0.66
>More info
-0.60
>More info
T8 leaf-well watered
Original data
GEO bulk
15
T6 leaf-drought
-0.65
>More info
-0.59
>More info
T6 leaf-well watered
Original data
GEO bulk
16
nhx5-1/nhx6
-0.64
>More info
-0.59
>More info
WT
Rosette leaf
Original data
GEO bulk
17
rosettes myoox drought
-0.66
>More info
-0.56
>More info
rosettes myoox watered
Original data
GEO bulk
18
myb50 xylem
0.56
>More info
0.64
>More info
wt xylem
xylem
Original data
GEO bulk
19
rosettes WT drought
-0.66
>More info
-0.53
>More info
rosettes WT watered
Original data
GEO bulk
20
Osmotic Stress 24 h (shoot)
-0.63
>More info
-0.55
>More info
Stress mock 24 h (shoot)
Original data
Stress treatments
21
nas4x leaves + Fe
0.65
>More info
0.53
>More info
WT leaves + Fe
Leaves
Original data
GEO bulk
22
AsAKiin11 T2
-0.50
>More info
-0.67
>More info
C2 C2del and (As)AKiin11 control T2
two days post infusion with Agrobacterium containing antisense (As)AKiin11
Arabidopsis rosette leaves
Original data
23
Rsch 8h
0.54
>More info
0.62
>More info
Rsch CA
Leaves
Original data
24
Col whole leaf 5 dpi
-0.55
>More info
-0.61
>More info
Col whole leaf 5d UI
whole leaf
Original data
GEO bulk
25
WT leaf-drought
-0.64
>More info
-0.50
>More info
WT leaf-well watered
Original data
GEO bulk
26
WT (Col-0) inflorescence drought day 10
-0.59
>More info
-0.54
>More info
WT (Col-0) inflorescence well-watered day 10
Unopen flower buds
Original data
GEO bulk
27
myb50 cork
0.54
>More info
0.58
>More info
wt cork
cork
Original data
GEO bulk
28
Homozygous-AtcesA4
-0.59
>More info
-0.53
>More info
Heterozygous-AtcesA4
rosette
Original data
GEO bulk
29
C2 leaf-drought
-0.63
>More info
-0.45
>More info
C2 leaf-well watered
Original data
GEO bulk
30
stn7-1
0.47
>More info
0.60
>More info
Col-0
rosette leaves
Original data
GEO bulk
31
Shoot apex inflorescence (after bolting)
0.41
>More info
0.65
>More info
Control for tissue data
Original data
Developmental series; organs / tissues at different ages
32
Col whole leaf amplified 5 dpi
-0.48
>More info
-0.58
>More info
Col whole leaf amplified 5d UI
whole leaf
Original data
GEO bulk
33
Col whole leaf 3dpi
-0.46
>More info
-0.59
>More info
Col whole leaf 0h UI
whole leaf
Original data
GEO bulk
34
Selenate (shoot)
-0.56
>More info
-0.48
>More info
Ws (shoot)
Original data
GEO bulk
35
Dry midday
-0.60
>More info
-0.44
>More info
Wet midday
water-limited
whole rosette
Original data
GEO bulk
36
Shoot Selenate
-0.56
>More info
-0.48
>More info
Shoot control
40 micromolar selenate
Shoot
Original data
GEO bulk
37
aba1 hypocotyl
0.39
>More info
0.65
>More info
Ler hypocotyl
hypocotyl
Original data
GEO bulk
38
ein2
-0.71
>More info
-0.32
>More info
Col-0
Leaves
Original data
GEO bulk
39
seed germinating in countinuous light 24h SL
0.36
>More info
0.67
>More info
Control for tissue data
seed
Original data
GEO bulk
40
myb61 cork
0.30
>More info
0.73
>More info
wt cork
cork
Original data
GEO bulk
41
Chitin
0.64
>More info
0.38
>More info
Col C
Original data
GEO bulk
42
opr3 JA 0.5 h
0.26
>More info
0.75
>More info
opr3 0 h
Original data
GEO bulk
43
gh3.5-1D 48 hpi
-0.52
>More info
-0.48
>More info
Col-0 uninoculated
Original data
GEO bulk
44
amiR-tor induced 6d
-0.63
>More info
-0.37
>More info
amiR-tor 6d C
6 days estradiol-treated
seedlings
Original data
GEO bulk
45
low water potential
-0.52
>More info
-0.48
>More info
control
Col-0 -1.2 MPa
whole seedlings
Original data
GEO bulk
46
Sulfometuron EC50
-0.61
>More info
-0.39
>More info
Carrier
Original data
GEO bulk
47
RRE2 Chitin
-0.59
>More info
-0.40
>More info
Chitin
Original data
GEO bulk
48
24h volatiles Sm. R3089
0.47
>More info
0.52
>More info
24h untreated
whole seedling
Original data
GEO bulk
49
dcl2-1
-0.50
>More info
-0.48
>More info
Col-0
Original data
GEO bulk
50
WT in -N
-0.57
>More info
-0.41
>More info
WT in FN
nitrogen depletion
whole seedling
Original data
GEO bulk
51
Infected pft1 leaf
0.35
>More info
0.63
>More info
Infected Col-0 leaf
F. oxysporum
leaf
Original data
GEO bulk
52
sfr3 control
-0.38
>More info
-0.60
>More info
WT control
All aerial tissue
Original data
GEO bulk
53
ced1
0.57
>More info
0.40
>More info
WT PEG 6hr
seedlings
Original data
GEO bulk
54
AFB1 0h
-0.40
>More info
-0.55
>More info
Col 0h
Leaf
Original data
GEO bulk
55
35S::KLU
-0.52
>More info
-0.42
>More info
WT
Shoot
Original data
56
ABA+DMTU
-0.50
>More info
-0.44
>More info
control
Original data
GEO bulk
57
Laer MeJA 1h
0.57
>More info
0.37
>More info
Laer Control
leaf discs
Original data
GEO bulk
58
Tsu -Fe 48h Shoots
-0.65
>More info
-0.29
>More info
Tsu +Fe 24h Shoots
Original data
GEO bulk
59
ref6-1
0.42
>More info
0.52
>More info
Col
whole seedling
Original data
GEO bulk
60
WT 30μM phosphate 8 hours.
0.43
>More info
0.51
>More info
WT control (not supplemented).
Original data
61
PBZ
-0.33
>More info
-0.60
>More info
none
PBZ
Rosette
Original data
GEO bulk
62
Dark 2day wt
-0.51
>More info
-0.41
>More info
0h wt
Original data
63
cov1 cov2 stem Top
0.59
>More info
0.33
>More info
WT stem Top
stem Top
Original data
GEO bulk
64
ADD3
0.55
>More info
0.36
>More info
WT
aerial part
Original data
GEO bulk
65
ABA 3 h
-0.50
>More info
-0.40
>More info
Mock 3 h
Original data
Basic hormone treatment of seedlings
66
abi1 hypocotyl
0.30
>More info
0.60
>More info
Ler hypocotyl
hypocotyl
Original data
GEO bulk
67
2hr transitory KNO3 PrR cell
0.20
>More info
0.70
>More info
2hr KCl control PrR cell
Protoplasted root cells
Original data
GEO bulk
68
ATR1 OE
-0.34
>More info
-0.55
>More info
WT for ATR1/MYB51
Original data
GEO bulk
69
psad1
0.51
>More info
0.38
>More info
WS
rosette leaves
Original data
GEO bulk
70
Dark 3day hml
-0.50
>More info
-0.39
>More info
0h hml
Original data
71
WT salt 12 h
-0.53
>More info
-0.36
>More info
WT salt 0 h
Salt with 120 mM NaCl for 24 h
seedlings
Original data
GEO bulk
72
amiR-tor induced 3d
-0.53
>More info
-0.36
>More info
amiR-tor 3d C
3 days estradiol-treated
seedlings
Original data
GEO bulk
73
Triazolopyrimidine EC50
-0.54
>More info
-0.34
>More info
Carrier (Triazolopyrimidine)
Original data
GEO bulk
74
root endodermis and quiescent center 40 mM NaCl
-0.31
>More info
-0.57
>More info
root endodermis and quiescent center
Original data
GEO bulk
75
Heat no recovery
-0.56
>More info
-0.31
>More info
Mock no recovery
seedling
Original data
GEO bulk
76
csn3-1 light
-0.51
>More info
-0.36
>More info
WT light
Original data
GEO bulk
77
Col-0 SA
-0.55
>More info
-0.31
>More info
Col-0 water
complete seedling
Original data
78
SLWF infested
-0.61
>More info
-0.25
>More info
SLWF uninfested
rosette tissue
Original data
GEO bulk
79
AsAKiin11 T1
-0.57
>More info
-0.29
>More info
C2 C2del and (As)AKiin11 control T1
one day post infusion with Agrobacterium containing antisense (As)AKiin11
Arabidopsis rosette leaves
Original data
80
Osmotic Stress 24 h (root)
-0.54
>More info
-0.31
>More info
Stress mock 24 h (root)
Original data
Stress treatments
81
RRE1 Chitin
-0.50
>More info
-0.35
>More info
Chitin
Original data
GEO bulk
82
A. thaliana-A. halleri hybrid
0.61
>More info
0.24
>More info
A. thaliana
mature leaves before flowering
Original data
GEO bulk
83
4C 2h(SOIL)
0.08
>More info
0.77
>More info
4C 0h(SOIL)
Original data
GEO bulk
84
irradiated leaf (WT 5d)
0.32
>More info
0.52
>More info
control leaf (WT 5d)
rosette leaf only
Original data
GEO bulk
85
Cs shoot
0.34
>More info
0.50
>More info
control shoot
Original data
GEO bulk
86
Shoot -Cs
-0.32
>More info
-0.51
>More info
Control-shoot
Original data
GEO bulk
87
IAA 0.5 h
0.27
>More info
0.55
>More info
Mock 0.5 h
Original data
Basic hormone treatment of seedlings
88
Primisulfuron EC50
-0.50
>More info
-0.31
>More info
Carrier (primisulfuron)
Original data
GEO bulk
89
chalazal seed coat linear-cotyledon
-0.50
>More info
-0.31
>More info
whole seeds linear-cotyledon
Original data
GEO bulk
90
Shoot apex vegetative &Young leaves
0.53
>More info
0.27
>More info
Control for tissue data
Original data
Developmental series; organs / tissues at different ages
91
WT-Dry
0.24
>More info
0.56
>More info
WT-CK
dehydration treatment 1h
Original data
92
Selenate (root)
0.29
>More info
0.50
>More info
Ws (root)
Original data
GEO bulk
93
ex2 flu dark 8hours/30 minute light
0.18
>More info
0.61
>More info
col dark 8hours/30 minute light
Original data
GEO bulk
94
Root Selenate
0.29
>More info
0.50
>More info
Root control
40 micromolar selenate
Root
Original data
GEO bulk
95
WT 3H Cold
0.20
>More info
0.58
>More info
WT control
Original data
GEO bulk
96
myb61 xylem
0.19
>More info
0.59
>More info
wt xylem
xylem
Original data
GEO bulk
97
ABA
-0.55
>More info
-0.22
>More info
control
Original data
GEO bulk
98
ARR22-ox (t-zeatin 3 h)
-0.51
>More info
-0.26
>More info
Col-0 (t-zeatin 3 h)
Original data
Cytokinin treatment of seedlings
99
Laer pretreat GA Flg22 1h
0.06
>More info
0.71
>More info
Laer pretreat water control
leaf discs
Original data
GEO bulk
100
SA 4mM
-0.54
>More info
-0.22
>More info
untreated
4 weeks old at time of treatment
whole leaf
Original data
GEO bulk
101
4C 1h
0.03
>More info
0.73
>More info
4C 0h
Original data
GEO bulk
102
general seed coat linear-cotyledon
-0.50
>More info
-0.24
>More info
whole seeds linear-cotyledon
Original data
GEO bulk
103
IAA7mII over-expressor IAA Treated
0.04
>More info
0.69
>More info
empty vector IAA Treated
Original data
GEO bulk
104
Imidazolinone EC50
-0.53
>More info
-0.19
>More info
Carrier (Imidazolinone)
Original data
GEO bulk
105
DUO1 induced 24h
-0.57
>More info
-0.14
>More info
24hr-not-induced
whole plant
Original data
GEO bulk
106
FLIGHT TAGESB plate6 ROOTS
0.11
>More info
0.60
>More info
GROUND CONTROL TAGESB plate6 ROOTS
plant tissue
Original data
107
Light
0.15
>More info
0.54
>More info
Control
Original data
GEO bulk
108
t-zeatin 0.5 h
0.02
>More info
0.66
>More info
Mock 0.5 h
Original data
Basic hormone treatment of seedlings
109
Heat shock optimum
0.03
>More info
0.65
>More info
Heat shock baseline
Photosynthesis at optimum temperature
leaf first fully expanded
Original data
GEO bulk
110
dicamba
-0.53
>More info
-0.14
>More info
WT mock
whole seedling
Original data
GEO bulk
111
sfr3 cold
-0.16
>More info
-0.51
>More info
WT cold
All aerial tissue
Original data
GEO bulk
112
ex1 flu dark 8hours/30 minute light
0.11
>More info
0.54
>More info
col dark 8hours/30 minute light
Original data
GEO bulk
113
bri1-116
-0.12
>More info
0.73
>More info
Col
seedling
Original data
GEO bulk
114
sfr6 cold
0.05
>More info
-0.66
>More info
WT cold
All aerial tissue
Original data
GEO bulk
115
A. thaliana-A. lyrata hybrid
0.59
>More info
0.01
>More info
A. thaliana
mature leaves before flowering
Original data
GEO bulk
116
35S:RPS4 eds1-2 2h
-0.03
>More info
-0.57
>More info
35S:RPS4 2h
leaves
Original data
117
FarRed Light 45min
0.05
>More info
0.54
>More info
White Light 45min
Original data
Light treatments
118
Whole root - low pH 30min
0.03
>More info
0.56
>More info
Whole root - Std pH 30min
pH 4.6 for 30 min
Original data
GEO bulk
119
CCA1-ox 6am non-polysomal
0.07
>More info
0.51
>More info
WT 6am non-polysomal
aerial part
Original data
120
Col-0 24hpi A. brassicicola
-0.56
>More info
0.02
>More info
Col-0 24hpi mock
3rd-5th true leaves
Original data
121
bHLH122 ox
0.02
>More info
-0.54
>More info
WT Col-0
bHLH122 overexpression
shoot
Original data
GEO bulk
122
Col BTH
-0.21
>More info
0.67
>More info
Col
rosettes
Original data
GEO bulk
123
CDB1-Knockout
0.10
>More info
-0.50
>More info
WT
Original data
GEO bulk
124
flu dark 8hours/30 minute light
-0.13
>More info
0.52
>More info
col dark 8hours/30 minute light
Original data
GEO bulk
125
cat2-long-day 2d
0.15
>More info
-0.50
>More info
Col0-LD2
transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark)
rosette leaf material
Original data
GEO bulk
126
Leafminer damaged seedlings
-0.27
>More info
0.56
>More info
Healthy seedlings
leaves
Original data
GEO bulk
127
siliques AtHb1 control
-0.28
>More info
0.52
>More info
siliques WT control
control
silique
Original data
GEO bulk
128
ARR22-ox
-0.60
>More info
0.48
>More info
Col-0
Original data
Cytokinin treatment of seedlings
129
Col0-PsmES4326-24hpi
-0.54
>More info
0.61
>More info
Col0-mock-24hpi
leaf
Original data
GEO bulk