4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on clf-28
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List of experiments correlated with "clf-28"  Help Download transcriptome of top 30
Score Experiment Correlation from
clf-28		 Correlation to
clf-28		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 clf-28 1.00 >More info 1.00 >More info Col whole plant Original data GEO bulk
2 swn-7 0.50 >More info 0.79 >More info Col whole plant Original data GEO bulk
3 ein2 1% sucrose 14-day-old -0.55 >More info -0.57 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
4 Day Time Treatment -0.47 >More info -0.57 >More info Day Time Control 1hr white light pulse aerial rosette Original data
5 gai MeJA 1h 0.44 >More info 0.56 >More info Laer MeJA 1h leaf discs Original data GEO bulk
6 clf-28 swn-7 0.78 >More info 0.20 >More info Col whole plant Original data GEO bulk
7 IMI 4mM 0.47 >More info 0.51 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
8 rdr6-15 -0.56 >More info -0.41 >More info Col-0 plant inflorescence Original data
9 Laer pretreat GA Flg22 1h 0.25 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
10 gapcp1gapcp2 -0.56 >More info -0.38 >More info WT Original data GEO bulk
11 Shoot dark control 7h 0.33 >More info 0.59 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
12 max3GR24 (1 uM) -0.38 >More info -0.53 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
13 high-R:FR bud axillary -0.40 >More info -0.51 >More info low-R:FR bud axillary high R rosette axillary bud n-2 Original data GEO bulk
14 wnk8-1 untreated 0.22 >More info 0.69 >More info Col-0 untreated seedlings Original data GEO bulk
15 cpctry -0.29 >More info -0.61 >More info Col Original data GEO bulk
16 ga1-3 scl3-1 -0.33 >More info -0.56 >More info ga1-3 whole root Original data
17 Col0-PsmES4326-24hpi 0.28 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
18 Time-0 chr11-1chr17-1 0.60 >More info 0.28 >More info Time-0 Col-0 leaf explants Original data
19 Col-0 +lincomycin 0.38 >More info 0.50 >More info Col-0 -lincomycin Original data GEO bulk
20 Shoot submergence 24h 0.33 >More info 0.54 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
21 pnp1-1 3h +P 0.51 >More info 0.36 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
22 dTLEc systemic wounding 0.16 >More info 0.71 >More info wt systemic wounding leaves Original data GEO bulk
23 bri1-116 0.14 >More info 0.73 >More info Col seedling Original data GEO bulk
24 wnk8-2 untreated 0.23 >More info 0.63 >More info Col-0 untreated seedlings Original data GEO bulk
25 Chemically -0.11 >More info -0.75 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
26 pXVE:HA-EDM2-a untreated 0.16 >More info 0.69 >More info Col-0 untreated seedlings Original data GEO bulk
27 gun1-9 norflurazon 0.50 >More info 0.34 >More info gun1-9 control Original data GEO bulk
28 gun5 norflurazon 0.53 >More info 0.31 >More info gun5 control Original data GEO bulk
29 seedling 1.5h after HZE atm-1 0.30 >More info 0.54 >More info seedling day 1 unirradiated atm-1 1.5h Original data
30 Nicotinamide-93hr 0.51 >More info 0.32 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
31 low CO2 + dark 0.28 >More info 0.54 >More info normal CO2 + light Original data GEO bulk
32 Mutant sav3-2 (WL) -0.21 >More info -0.61 >More info Col-0 (WL) Original data GEO bulk
33 sav3-2 light -0.21 >More info -0.61 >More info Col-0 light seedlings Original data GEO bulk
34 IRP1-OE-Fe--shoot 0.55 >More info 0.26 >More info COL-0-Fe--shoot shoot Original data
35 Col BTH 0.13 >More info 0.67 >More info Col rosettes Original data GEO bulk
36 Shoot dark control 24h 0.23 >More info 0.57 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
37 WT Bc inoculation 14h 0.54 >More info 0.25 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
38 Heat shock optimum 0.14 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
39 Transgenic LEC2GR Seedling 1h Dex -0.12 >More info -0.67 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
40 Night Time Treatment -0.27 >More info -0.52 >More info Night Time Control 1hr white light pulse aerial rosette Original data
41 Leaf systemic -0.22 >More info -0.55 >More info Leaf control vegetative leaf Original data GEO bulk
42 Nicotinamide-77hr 0.51 >More info 0.25 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
43 phr1 phl1 Root-Pi 0.20 >More info 0.56 >More info WT Shoot+Pi roots Original data GEO bulk
44 opr3 JA 0.5 h -0.13 >More info -0.63 >More info opr3 0 h Original data GEO bulk
45 Leafminer damaged seedlings 0.20 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
46 IAA7mII over-expressor IAA Treated 0.06 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
47 gun5 control -0.21 >More info -0.53 >More info Col-0 control Original data GEO bulk
48 Leaf wounded -0.20 >More info -0.54 >More info Leaf control vegetative leaf Original data GEO bulk
49 current injection -0.10 >More info -0.64 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
50 WT hypoxia 0.24 >More info 0.50 >More info WT normoxia whole rosette Original data
51 ANOXIA 0.16 >More info 0.56 >More info ANOXIA+SUCROSE Original data GEO bulk
52 Methyl Jasmonate 1 h -0.14 >More info -0.58 >More info Mock 1 h Original data Basic hormone treatment of seedlings
53 Whole root - low pH 48H 0.08 >More info 0.64 >More info Whole root - Std pH 48H pH 4.6 for 48 hr Original data GEO bulk
54 pepr1-1 Pepr2-3 untreated -0.18 >More info -0.54 >More info WT untreated untreated Original data GEO bulk
55 SCL3 OE 0.22 >More info 0.50 >More info Col-0 whole root Original data GEO bulk
56 HSP90 Reduced RNAi-C1 0.63 >More info 0.08 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
57 Col-0 SA 0.53 >More info 0.18 >More info Col-0 Original data GEO bulk
58 toc1-1-85hr -0.07 >More info -0.64 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
59 Whole root - S 3H -0.16 >More info -0.54 >More info Whole root - S 0H Original data GEO bulk
60 dorn1-1 Root 100 mM ATP 30 min 0.12 >More info 0.58 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
61 Nicotinamide-69hr 0.50 >More info 0.18 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
62 oas-a1.1 Cd 24h -0.07 >More info -0.60 >More info Cd 24h root Shoot Original data GEO bulk
63 HSP90 Reduced RNAi-A3 0.56 >More info 0.10 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
64 WT-Dry -0.16 >More info -0.50 >More info WT-CK dehydration treatment 1h Original data
65 WT Seedling BL -0.15 >More info -0.50 >More info WT Seedling Dark Original data GEO bulk
66 sfr3 cold 0.51 >More info 0.13 >More info WT-cold aerial tissues Original data GEO bulk
67 Laer pretreat JA Flg22 0h 0.08 >More info 0.56 >More info Laer pretreat water control leaf discs Original data GEO bulk
68 TNT-seedlings -0.00 >More info -0.64 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
69 irradiated leaf (WT 5d) -0.07 >More info -0.56 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
70 Wounding Stress3 h (shoot) -0.02 >More info -0.60 >More info Stress mock 3 h (shoot) Original data Stress treatments
71 Polysomal RNA 35S:AtCSP1-FH1 0.01 >More info 0.61 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
72 root protoplasts 40 mM NaCl -0.04 >More info -0.58 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
73 seedling 24h after Gamma atm-1 -0.07 >More info -0.54 >More info seedling day 2 unirradiated atm-1 24h Original data
74 abi1 hypocotyl -0.08 >More info -0.53 >More info Ler hypocotyl hypocotyl Original data GEO bulk
75 Shoot apex inflorescence (after bolting) -0.05 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
76 root - 04% oxygen - 2h -0.07 >More info -0.52 >More info root - 21% oxygen - 2h Original data GEO bulk
77 1h +Pi -0.07 >More info 0.65 >More info 1h -Pi root Original data GEO bulk
78 46T-CK -0.05 >More info -0.53 >More info WT-CK none Original data
79 leaf -0.53 >More info -0.04 >More info Control for tissue data leaf Original data GEO bulk
80 ABA 1 h 0.02 >More info 0.55 >More info Mock 1 h Original data Basic hormone treatment of seedlings
81 Selenate (root) -0.01 >More info -0.55 >More info Ws (root) Original data GEO bulk
82 Root Selenate -0.01 >More info -0.55 >More info Root control 40 micromolar selenate Root Original data GEO bulk
83 WT-16ºC 0.00 >More info 0.55 >More info WT-23ºC Original data GEO bulk
84 siliques AtHb1 control 0.02 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
85 shoot hypoxia p35S 0.03 >More info 0.50 >More info shoot hypoxia total Original data GEO bulk
86 toc1-1-81hr 0.08 >More info -0.59 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
87 opr3 OPDA 0.5 h 0.02 >More info -0.53 >More info opr3 0 h Original data GEO bulk
88 root longitudinal zone-3 -Fe -0.03 >More info 0.52 >More info root longitudinal zone-3 standard Original data GEO bulk
89 Pst-DC3000(avrRpm1)-4hpi 0.03 >More info -0.52 >More info Pst-DC3000-4hpi Original data GEO bulk
90 Red/FR Light45min 0.04 >More info -0.52 >More info FarRed Light 45min Original data Light treatments
91 9 hr Hypoxia 1 hr recovery Total RNA 0.04 >More info -0.52 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
92 EL (leaves 1-2) 14DAS -0.50 >More info 0.02 >More info Control for tissue data Original data GEO bulk
93 ABI3GR +DEX +CHX 0.11 >More info -0.55 >More info ABI3GR -DEX +CHX DEX CHX root/protoplasts Original data GEO bulk
94 CCA1-ox 6am non-polysomal -0.07 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
95 seed germinating in countinuous light 24h SL -0.25 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
96 Te 8h 0.11 >More info -0.52 >More info Te CA Leaves Original data
97 dsr1 -0.25 >More info 0.59 >More info WT mock Whole seedling Original data GEO bulk
98 root longitudinal zone-2 -Fe -0.22 >More info 0.52 >More info root longitudinal zone-2 standard Original data GEO bulk
99 tt4 0.51 >More info -0.31 >More info WT aerial region Original data GEO bulk