4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Whole root - S 12H
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List of experiments correlated with "Whole root - S 12H"  Help Download transcriptome of top 30
Score Experiment Correlation from
Whole root - S 12H		 Correlation to
Whole root - S 12H		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Whole root - S 12H 1.00 >More info 1.00 >More info Whole root - S 0H Original data GEO bulk
2 Whole root - S 24H 0.93 >More info 0.94 >More info Whole root - S 0H Original data GEO bulk
3 Whole root - S 48H 0.90 >More info 0.91 >More info Whole root - S 0H Original data GEO bulk
4 Whole root - S 3H 0.89 >More info 0.92 >More info Whole root - S 0H Original data GEO bulk
5 Whole root - S 72H 0.90 >More info 0.82 >More info Whole root - S 0H Original data GEO bulk
6 seedling -S Exp 0.74 >More info 0.71 >More info seedling FN Exp seedling Original data
7 COL-0-Fe--root 0.70 >More info 0.65 >More info COL-0-Ctrl--root root Original data
8 oas-a1.1 root 0.56 >More info 0.79 >More info WT-Untreated Root Original data GEO bulk
9 Ibuprofen 3 h 0.57 >More info 0.70 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
10 -Sulfate 24 h 0.59 >More info 0.67 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
11 seedling 24h after Gamma atm-1 0.59 >More info 0.67 >More info seedling day 2 unirradiated atm-1 24h Original data
12 seedling 24h after Gamma WT 0.60 >More info 0.65 >More info seedling day 2 unirradiated WT 24h Original data
13 Day Time Treatment 0.58 >More info 0.64 >More info Day Time Control 1hr white light pulse aerial rosette Original data
14 3x(p) -0.48 >More info -0.74 >More info 2x two week old seedlings Original data
15 24h volatiles Sm. R3089 -0.62 >More info -0.56 >More info 24h untreated whole seedling Original data GEO bulk
16 WT cold 0.60 >More info 0.58 >More info WT control All aerial tissue Original data GEO bulk
17 WT (Col) glucose 0.50 >More info 0.66 >More info WT (Col) glucose seedlings Original data GEO bulk
18 COL-0-Fe--shoot 0.59 >More info 0.57 >More info COL-0-Ctrl--shoot shoot Original data
19 Chemically 0.51 >More info 0.63 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
20 Dark 4 h pls UV-AB 5min 0.58 >More info 0.56 >More info Dark 4 h Original data Light treatments
21 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.65 >More info 0.48 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
22 ga1-3 scl3-1 0.57 >More info 0.55 >More info ga1-3 whole root Original data
23 ws 24h4c q8ws 0.68 >More info 0.44 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
24 6-trichlorophenoxyacetic acid 3 h 0.55 >More info 0.57 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
25 col 24h4c set4 0.61 >More info 0.51 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
26 4x -0.49 >More info -0.63 >More info 2x two week old seedlings Original data
27 xyl-grown cell culture- 1h 1mM Glc 0.55 >More info 0.56 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
28 amiR-tor induced 6d 0.65 >More info 0.44 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
29 3x(m) -0.42 >More info -0.67 >More info 2x two week old seedlings Original data
30 Pseudomonas -0.51 >More info -0.58 >More info Control pseudomonas treated whole seedling Original data GEO bulk
31 (Ws-2)+100 uM As 0.59 >More info 0.48 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
32 Shoot dark control 24h -0.54 >More info -0.52 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
33 ahg2-1sid2-2 0.50 >More info 0.55 >More info WT (Col) control Original data GEO bulk
34 24h volatiles Sp. HRO-C48 -0.62 >More info -0.43 >More info 24h untreated whole seedling Original data GEO bulk
35 seedling 1.5h after HZE atm-1 -0.50 >More info -0.55 >More info seedling day 1 unirradiated atm-1 1.5h Original data
36 plant (Col-0) 4h phytoprostane A1 0.53 >More info 0.52 >More info plant (tga2-5-6) 4h control Original data GEO bulk
37 ARR22-ox 0.57 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
38 Shoot dark control 7h -0.53 >More info -0.51 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
39 low CO2 + dark -0.47 >More info -0.57 >More info normal CO2 + light Original data GEO bulk
40 Night Time Treatment 0.44 >More info 0.60 >More info Night Time Control 1hr white light pulse aerial rosette Original data
41 NJ15 0.44 >More info 0.60 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
42 Cd 18h root 0.50 >More info 0.53 >More info WT-Untreated Root Original data GEO bulk
43 Differentiation 12h 0.55 >More info 0.48 >More info Differentiation 0h leaves Original data
44 MG132 3 h 0.52 >More info 0.51 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
45 ptpks2 0.26 >More info 0.77 >More info Col-WT leaves Original data GEO bulk
46 essp4/sdg8-5 mutant 0.62 >More info 0.40 >More info wild type leaf Original data GEO bulk
47 efr-1 untreated 0.50 >More info 0.52 >More info WT untreated untreated Original data GEO bulk
48 ABA 3h 0.60 >More info 0.42 >More info EtOH 3h 3hr Original data GEO bulk
49 cngc4 -0.50 >More info -0.52 >More info Ws-2 Seedlings Original data GEO bulk
50 naxillin 3h 0.61 >More info 0.41 >More info before treatment naxillin root Original data GEO bulk
51 5-Triiodobenzoic acid3 h 0.54 >More info 0.47 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
52 P-chlorophenoxy- isobutyric acid 3 h 0.46 >More info 0.55 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
53 Glyphosate EC50 0.45 >More info 0.56 >More info Carrier (Glyphosate) Original data GEO bulk
54 Whole root - low pH 6H 0.69 >More info 0.31 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
55 Whole root - low pH 24H 0.62 >More info 0.38 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
56 Col-0 WT HL 3h 0.54 >More info 0.46 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
57 35S::MBF1c -0.52 >More info -0.48 >More info control Original data GEO bulk
58 ein2-1 untreated 0.68 >More info 0.32 >More info WT untreated untreated Original data GEO bulk
59 6h volatiles Sm. R3089 -0.54 >More info -0.46 >More info 6h untreated whole seedling Original data GEO bulk
60 Heat no recovery 0.57 >More info 0.43 >More info Mock no recovery seedling Original data GEO bulk
61 gun1gun5 far-red pretreated -0.52 >More info -0.48 >More info WT far-red pretreated Original data GEO bulk
62 penta mutant (higher order mutant) -0.54 >More info -0.46 >More info col control (higher order mutant) Original data GEO bulk
63 1 h Light Total RNA 0.47 >More info 0.53 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
64 Differentiation 24h 0.53 >More info 0.46 >More info Differentiation 0h leaves Original data
65 cpctry 0.54 >More info 0.45 >More info Col Original data GEO bulk
66 swn-7 -0.54 >More info -0.45 >More info Col whole plant Original data GEO bulk
67 -Sulfate 2 h 0.51 >More info 0.47 >More info Mock 2 h (1500uM sulfate) Original data Response to sulfate limitation
68 cell culture 4 h phytoprostane A1 0.59 >More info 0.39 >More info cell culture 4 h control Original data GEO bulk
69 grf1/grf2/grf3 0.58 >More info 0.39 >More info WS Original data GEO bulk
70 Shoot submergence 24h -0.52 >More info -0.45 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
71 lib 0.54 >More info 0.43 >More info WT whole seedling Original data GEO bulk
72 4h decapitation 0.40 >More info 0.57 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
73 Cocultivation 8 hrs leaf -0.44 >More info -0.53 >More info Mock cocultivation 8 hrs leaf Leaf Original data
74 Tsu-1 -Fe 24h 0.41 >More info 0.55 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
75 Tsu -Fe 24h Roots 0.41 >More info 0.55 >More info Tsu +Fe 24h Roots Original data GEO bulk
76 tetraploid -0.33 >More info -0.63 >More info diploid Original data GEO bulk
77 35S::PI ap3-3 35S::AP-GR +DEX 0.39 >More info 0.56 >More info 0hr DEX Original data GEO bulk
78 nia1nia2 0.59 >More info 0.36 >More info Col-0 whole seedlings Original data GEO bulk
79 short 14-degree- 0.35 >More info 0.60 >More info control short Original data GEO bulk
80 ga1-3 SCL3OE 0.37 >More info 0.58 >More info ga1-3 whole root Original data
81 12h volatiles Sm. R3089 -0.56 >More info -0.38 >More info 12h untreated whole seedling Original data GEO bulk
82 ahg2-1 0.52 >More info 0.42 >More info WT (Col) control Original data GEO bulk
83 Col-7 Sucrose 0.52 >More info 0.42 >More info col-7 Original data GEO bulk
84 sdg8-2 mutant 0.53 >More info 0.41 >More info wild type leaf Original data GEO bulk
85 Ler KAR1 24h seed 0.32 >More info 0.62 >More info Ler WATER 24h seed KAR1 seed Original data GEO bulk
86 6h volatiles Sp. HRO-C48 -0.59 >More info -0.34 >More info 6h untreated whole seedling Original data GEO bulk
87 seedling 1.5h after HZE WT -0.51 >More info -0.42 >More info seedling day 1 unirradiated WT 1.5h Original data
88 short 17-degree- 0.35 >More info 0.58 >More info control short Original data GEO bulk
89 Dark 6h ivd -0.54 >More info -0.38 >More info 0h ivd Original data
90 amiR-tor induced 3d 0.57 >More info 0.35 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
91 nia1nia2noa1-2 0.51 >More info 0.41 >More info Col-0 whole seedlings Original data GEO bulk
92 Col-0 overexpressing At1g54160 control 0.53 >More info 0.38 >More info WT no treatement Original data GEO bulk
93 At1g54160 ox 0.53 >More info 0.38 >More info Col-0 Original data GEO bulk
94 short 12-degree- 0.28 >More info 0.63 >More info control short Original data GEO bulk
95 cat2-2; 8h switch to ambient CO2 concentrations; 0.28 >More info 0.63 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
96 low CO2 + light -0.41 >More info -0.50 >More info normal CO2 + light Original data GEO bulk
97 NAA 3h 0.55 >More info 0.35 >More info before treatment NAA root Original data GEO bulk
98 M6PR transgenic leaf 0mM NaCl -0.34 >More info -0.54 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
99 camta1-2 -0.36 >More info -0.52 >More info Col-0-WT Original data GEO bulk
100 Col-0 DCA 6d -0.32 >More info -0.55 >More info Col-0 MOCK 6d Original data GEO bulk
101 WT 1wk -P 0.58 >More info 0.29 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
102 12h volatiles Sp. HRO-C48 -0.54 >More info -0.32 >More info 12h untreated whole seedling Original data GEO bulk
103 pepr1-1 Pepr2-3 untreated 0.56 >More info 0.30 >More info WT untreated untreated Original data GEO bulk
104 AtLysM RLK1 mutant water 0.59 >More info 0.27 >More info WT water Original data GEO bulk
105 WT resupplied Pi 4h 0.62 >More info 0.24 >More info WT complete seedlings Original data
106 short 10-degree- 0.28 >More info 0.58 >More info control short Original data GEO bulk
107 elf3-7-16ºC 0.35 >More info 0.51 >More info WT-16ºC Original data GEO bulk
108 Dark 1day wt -0.53 >More info -0.32 >More info 0h wt Original data
109 Selenate (root) 0.60 >More info 0.25 >More info Ws (root) Original data GEO bulk
110 Root Selenate 0.60 >More info 0.25 >More info Root control 40 micromolar selenate Root Original data GEO bulk
111 tga1 tga4 2h KNO3 -0.26 >More info -0.59 >More info Col 0 2h KNO3 5 mM KNO3 root Original data GEO bulk
112 Dark 1day ivd -0.51 >More info -0.33 >More info 0h ivd Original data
113 inhibitor B Treated 0.51 >More info 0.33 >More info Negative Control Original data GEO bulk
114 12h-DC3000 avrRpm1 -0.28 >More info -0.54 >More info 12h-DC3000 leaves Original data GEO bulk
115 ANOXIA -0.31 >More info -0.51 >More info ANOXIA+SUCROSE Original data GEO bulk
116 root cap pGL2 8h BL -0.70 >More info -0.12 >More info root cap pGL2 0h BL brassinosteroid root Original data
117 Mutant nph4-1_arf19-1 0.50 >More info 0.31 >More info Col Original data GEO bulk
118 Col-0 SA 0.52 >More info 0.28 >More info Col-0 water complete seedling Original data
119 gun1gun5 drak pretreated -0.52 >More info -0.28 >More info WT drak pretreated Original data GEO bulk
120 root longitudinal zone-3 pH 4.6 0.22 >More info 0.58 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
121 arr10 arr12 0.52 >More info 0.27 >More info WT Original data GEO bulk
122 Laer pretreat GA Flg22 1h 0.08 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
123 seedling 1.5h after Gamma WT 0.51 >More info 0.27 >More info seedling day 1 unirradiated WT 1.5h Original data
124 bri1-116 0.05 >More info 0.73 >More info Col seedling Original data GEO bulk
125 Dark 6h wt -0.50 >More info -0.27 >More info 0h wt Original data
126 Mutant axr3-1 0.27 >More info 0.50 >More info Col Original data GEO bulk
127 gun1-9 control 0.25 >More info 0.52 >More info Col-0 control Original data GEO bulk
128 tmm1-inflorescence-tips 0.18 >More info 0.59 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
129 Hydrogen Peroxide 500 uM 0.22 >More info 0.55 >More info Control RB and PER Hydrogen Peroxide Original data
130 cdkf:1-2 0.53 >More info 0.23 >More info wt seedling young seedlings Original data GEO bulk
131 detached inflorescences 24h -0.52 >More info -0.24 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
132 mutant acs6E (single mutant) 0.23 >More info 0.53 >More info col control (single mutant) Original data GEO bulk
133 Col-0 +ABA LF 0.52 >More info 0.22 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
134 ebs Pool -0.51 >More info -0.23 >More info Ler Pool seedling Original data GEO bulk
135 dorn1-1 Root MES buffer 30 min 0.50 >More info 0.23 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
136 IRP1-OE-Ctrl--shoot 0.51 >More info 0.22 >More info COL-0-Ctrl--shoot shoot Original data
137 Col-0 (t-zeatin 3 h) 0.23 >More info 0.50 >More info Col-0 Original data Cytokinin treatment of seedlings
138 tt4 UV -0.09 >More info -0.64 >More info UV aerial region Original data GEO bulk
139 root longitudinal zone-4 -Fe 0.16 >More info 0.56 >More info root longitudinal zone-4 standard Original data GEO bulk
140 seed germinating in countinuous light 24h SL 0.05 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
141 Col0-PsmES4326-24hpi 0.11 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
142 cca1-lhy before light -0.52 >More info -0.19 >More info before light whole seedlings Original data GEO bulk
143 ein2 1% sucrose 14-day-old 0.61 >More info 0.10 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
144 IAA7mII over-expressor IAA Treated 0.02 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
145 Red Light 4 h -0.13 >More info -0.57 >More info White Light 4 h Original data Light treatments
146 OsRLCK253 expressing 0.20 >More info 0.50 >More info WT seedlings Original data GEO bulk
147 camta1/2/3 warm -0.50 >More info -0.17 >More info WT warm entire aerial part Original data GEO bulk
148 30m light 0.16 >More info 0.51 >More info before light whole seedlings Original data GEO bulk
149 mutant acs2C (single mutant) -0.51 >More info -0.15 >More info col control (single mutant) Original data GEO bulk
150 spores of Gigaspora rosea -0.50 >More info -0.16 >More info Control Original data GEO bulk
151 Whole root - low pH 3H 0.50 >More info 0.16 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
152 sfr2 control 0.50 >More info 0.16 >More info WT control All aerial tissue Original data GEO bulk
153 AFB1 PSTDC3000 24h -0.51 >More info -0.14 >More info Col PSTDC3000 24h Leaf Original data GEO bulk
154 myb61 xylem -0.06 >More info -0.56 >More info wt xylem xylem Original data GEO bulk
155 seedling SPL13 -0.50 >More info -0.12 >More info seedling Col-0 Original data GEO bulk
156 Mutant axr3-1 (IAA) 0.07 >More info 0.54 >More info Col (IAA) Original data GEO bulk
157 Propiconazole 3 h 0.51 >More info 0.10 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
158 cdpk6-yfp 0.09 >More info 0.52 >More info Kan seedlings Original data GEO bulk
159 Leafminer damaged seedlings 0.04 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
160 nbp35-3/- -0.53 >More info -0.06 >More info WT whole seedling Original data GEO bulk
161 Apex mir-319b 17DAS 0.50 >More info 0.09 >More info Apex Col 14DAS Original data GEO bulk
162 seedling 12h after Gamma atm-1 0.54 >More info 0.03 >More info seedling day 1 unirradiated atm-1 12h Original data
163 Shoot apex inflorescence (after bolting) -0.08 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
164 R. solani AG2-1 0.57 >More info -0.01 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
165 Heat shock optimum -0.10 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
166 ein3 eil1 JA 0.53 >More info -0.00 >More info JA Whole seedling Original data GEO bulk
167 ANAC102 knock-out 0.03 >More info -0.53 >More info Col-0 Original data GEO bulk
168 Blue Light 45 min 0.13 >More info -0.62 >More info White Light 45min Original data Light treatments
169 CCA1-ox 6am non-polysomal -0.09 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
170 iron minus 24h -0.15 >More info 0.53 >More info iron +24h root Original data GEO bulk
171 siliques AtHb1 control -0.15 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
172 atmyc2 Seedling BL -0.18 >More info 0.51 >More info WT Seedling BL Original data GEO bulk
173 Col BTH -0.36 >More info 0.67 >More info Col rosettes Original data GEO bulk