4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on seed germinating in countinuous light 1 h SL
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "seed germinating in countinuous light 1 h SL"  Help Download transcriptome of top 30
Score Experiment Correlation from
seed germinating in countinuous light 1 h SL		 Correlation to
seed germinating in countinuous light 1 h SL		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 seed germinating in countinuous light 1 h SL 1.00 >More info 1.00 >More info Control for tissue data seed Original data GEO bulk
2 seed during stratification 48 h S 0.97 >More info 0.98 >More info Control for tissue data seed Original data GEO bulk
3 seed germinating in countinuous light 6 h SL 0.95 >More info 0.96 >More info Control for tissue data seed Original data GEO bulk
4 seed germinating in countinuous light 12 h SL 0.93 >More info 0.93 >More info Control for tissue data seed Original data GEO bulk
5 seed during stratification 12 h S 0.91 >More info 0.91 >More info Control for tissue data seed Original data GEO bulk
6 seed during stratification 1 h S 0.91 >More info 0.91 >More info Control for tissue data seed Original data GEO bulk
7 lec1-1 Mature Green Seed 0.90 >More info 0.91 >More info Control for tissue data Original data GEO bulk
8 lec1-1 Post-Mature Green Seed 0.90 >More info 0.91 >More info Control for tissue data Original data GEO bulk
9 dry seed 0 h 0.90 >More info 0.90 >More info Control for tissue data seed Original data GEO bulk
10 seed freshly harvested H 0.90 >More info 0.90 >More info Control for tissue data seed Original data GEO bulk
11 seed germinating in countinuous light 48 h SL 0.89 >More info 0.90 >More info Control for tissue data seed Original data GEO bulk
12 Col dryseed 0.89 >More info 0.90 >More info Control for tissue data dry seeds Original data
13 Seeds stage8 w/o siliques 0.89 >More info 0.89 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
14 Callus 0.88 >More info 0.90 >More info Control for tissue data callus Original data GEO bulk
15 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (8 dpg)		 0.88 >More info 0.90 >More info Control for tissue data Original data GEO bulk
16 Root from tip to 130 mm proximal to tip (cut
8dpg)		 0.88 >More info 0.90 >More info Control for tissue data Original data GEO bulk
17 Ambient CO2 leaf primordia 0.88 >More info 0.89 >More info Control for tissue data leaf primordia Original data
18 Root from tip to 130 mm proximal to tip (cut
4dpg)		 0.88 >More info 0.89 >More info Control for tissue data Original data GEO bulk
19 Shoot apex vegetative 0.88 >More info 0.89 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
20 Shoot apex transition (before bolting) 0.88 >More info 0.89 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
21 Regenerating Stump Root Tip Cut 130 mm andn Recut
13 hrs Taking 70 mm of Stump (4dpg)		 0.88 >More info 0.88 >More info Control for tissue data Original data GEO bulk
22 Shoot apex vegetative &Young leaves 0.88 >More info 0.88 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
23 WT cotyledons 0.88 >More info 0.88 >More info Control for tissue data cotyledons Original data
24 Regenerating Stump Root Tip Cut 130 mm andn Recut
22 hrs Taking 70 mm of Stump (4dpg)		 0.88 >More info 0.88 >More info Control for tissue data Original data GEO bulk
25 Atape2 low light 0.88 >More info 0.88 >More info Control for tissue data shoot apical meristem Original data GEO bulk
26 HDG4 0.88 >More info 0.88 >More info Control for tissue data shoot apical meristem Original data GEO bulk
27 Ambient CO2 expanding leaf 0.88 >More info 0.88 >More info Control for tissue data expanding leaf Original data
28 Regenerating Stump Root Tip Cut 130 mm andn Recut
5 hrs Taking 70 mm of Stump (4dpg)		 0.87 >More info 0.89 >More info Control for tissue data Original data GEO bulk
29 Inflorescences ler 0.87 >More info 0.88 >More info Control for tissue data inflorescences Original data GEO bulk
30 Carpels stage15 0.87 >More info 0.88 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
31 KAN1 0.88 >More info 0.87 >More info Control for tissue data shoot apical meristem Original data GEO bulk
32 LAS 0.88 >More info 0.87 >More info Control for tissue data shoot apical meristem Original data GEO bulk
33 Rosette leaf No12 0.88 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
34 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (4dpg)		 0.87 >More info 0.88 >More info Control for tissue data Original data GEO bulk
35 Flower (stage12) 0.88 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
36 HMG 0.88 >More info 0.87 >More info Control for tissue data shoot apical meristem Original data GEO bulk
37 Apex 5DAS 0.87 >More info 0.87 >More info Control for tissue data Original data GEO bulk
38 lec1-1 24h post-fertilization Seed 0.87 >More info 0.87 >More info Control for tissue data Original data GEO bulk
39 Bud 0.87 >More info 0.87 >More info Control for tissue data pollen grains and tubes Original data
40 lateral nectary stage 11-12 0.87 >More info 0.87 >More info Control for tissue data lateral nectaries Original data GEO bulk
41 Petiol (leaf7) 0.87 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
42 Mature roots 0.86 >More info 0.88 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
43 in vivo pollen tube 0.87 >More info 0.87 >More info Control for tissue data pollen tube Original data GEO bulk
44 lec1-1 Globular Stage Seed 0.87 >More info 0.87 >More info Control for tissue data Original data GEO bulk
45 Hypocotyl 0.87 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
46 lec1-1 Cotyledon Stage Seed 0.87 >More info 0.87 >More info Control for tissue data Original data GEO bulk
47 seedling 0.87 >More info 0.87 >More info Control for tissue data seedling Original data GEO bulk
48 unpollinated pistil 0.87 >More info 0.87 >More info Control for tissue data pistil Original data GEO bulk
49 Section Root from70 mm to 340 mm harvested
immediately		 0.87 >More info 0.87 >More info Control for tissue data Original data GEO bulk
50 S17 0.87 >More info 0.87 >More info Control for tissue data shoot apical meristem Original data GEO bulk
51 Ambient CO2 fully expanded leaf 0.87 >More info 0.87 >More info Control for tissue data fully expanded leaf Original data
52 flowers 0.87 >More info 0.87 >More info Control for tissue data Original data GEO bulk
53 torpedo-basal 0.86 >More info 0.88 >More info Control for tissue data torpedo embryo basal tissue Original data GEO bulk
54 Petals stage15 0.86 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
55 Flowers stage15 0.86 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
56 flower-buds 0.87 >More info 0.86 >More info Control for tissue data Original data GEO bulk
57 median nectary stage 14-15 0.86 >More info 0.87 >More info Control for tissue data median nectaries Original data GEO bulk
58 ovule 0.87 >More info 0.86 >More info Control for tissue data ovule Original data GEO bulk
59 Pedicels stage15 0.87 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
60 ML (Mature leaves) 35DAS 0.87 >More info 0.86 >More info Control for tissue data Original data GEO bulk
61 Proximalhalf (leaf7) 0.87 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
62 EL (leaves 1-2) 14DAS 0.87 >More info 0.86 >More info Control for tissue data Original data GEO bulk
63 Expanding leaf 0.87 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
64 silique 0.87 >More info 0.86 >More info Control for tissue data silique Original data GEO bulk
65 lateral nectary stage 14-15 0.86 >More info 0.87 >More info Control for tissue data lateral nectaries Original data GEO bulk
66 Apex 14DAS 0.87 >More info 0.86 >More info Control for tissue data Original data GEO bulk
67 Cells whole embryo 0.86 >More info 0.87 >More info Control for tissue data whole embryo Original data
68 Senescing leaf 0.87 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
69 AtHB8 0.87 >More info 0.86 >More info Control for tissue data shoot apical meristem Original data GEO bulk
70 siliques 0.87 >More info 0.86 >More info Control for tissue data Original data GEO bulk
71 Stem 1st node 0.86 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
72 Leaf 0.86 >More info 0.86 >More info Control for tissue data leaf Original data GEO bulk
73 embryo proper mature green 0.86 >More info 0.86 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
74 whole seeds 0.86 >More info 0.86 >More info Control for tissue data Original data GEO bulk
75 flower 0.86 >More info 0.86 >More info Control for tissue data flower Original data GEO bulk
76 Seeds stage3 with siliques 0.86 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
77 leaf 0.87 >More info 0.85 >More info Control for tissue data leaf Original data GEO bulk
78 Nuclei proembryo 0.86 >More info 0.86 >More info Control for tissue data proembryo Original data
79 Sepals stage15 0.86 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
80 Anther 0.86 >More info 0.86 >More info Control for tissue data anther Original data
81 whole seeds mature green 0.86 >More info 0.86 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
82 embryo proper heart stage 0.85 >More info 0.87 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
83 Cauline leaves 0.86 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
84 embryo proper 0.86 >More info 0.86 >More info Control for tissue data Original data GEO bulk
85 Cotyledons 0.86 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
86 Nuclei suspensor 0.85 >More info 0.86 >More info Control for tissue data suspensor Original data
87 micropylar endosperm heart stage 0.85 >More info 0.86 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
88 Distal half (leaf7) 0.86 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
89 peripheral endosperm heart stage 0.85 >More info 0.86 >More info Control for tissue data peripheral endosperm captured by LCM Original data GEO bulk
90 Rosette leaf No2 0.86 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
91 heart-stage-root 0.84 >More info 0.87 >More info Control for tissue data Original data GEO bulk
92 globular-apical 0.84 >More info 0.87 >More info Control for tissue data globular embryo apical tissue Original data GEO bulk
93 heart-stage-cotyledon 0.85 >More info 0.86 >More info Control for tissue data Original data GEO bulk
94 root hair 0.85 >More info 0.85 >More info Control for tissue data root hairs Original data GEO bulk
95 peripheral endosperm mature green 0.85 >More info 0.85 >More info Control for tissue data peripherial endosperm captured by LCM Original data GEO bulk
96 chalazal endosperm mature green 0.85 >More info 0.85 >More info Control for tissue data chalazal endosperm captured by LCM Original data GEO bulk
97 differentiating xylem 0.85 >More info 0.85 >More info Control for tissue data xylem Original data GEO bulk
98 torpedo-meristem 0.85 >More info 0.85 >More info Control for tissue data torpedo embryo meristem tissue Original data GEO bulk
99 cortex 0.85 >More info 0.85 >More info Control for tissue data cortex Original data GEO bulk
100 Stem 2ndinternode 0.85 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
101 phloem sieve cells and companion cells 0.85 >More info 0.85 >More info Control for tissue data phloem Original data GEO bulk
102 whole seeds heart stage 0.85 >More info 0.85 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
103 micropylar endosperm mature green 0.85 >More info 0.85 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
104 globular-basal 0.84 >More info 0.86 >More info Control for tissue data globular embryo basal tissue Original data GEO bulk
105 mature endodermis glcal 0.84 >More info 0.85 >More info Control for tissue data endodermis Original data GEO bulk
106 chalazal endosperm 0.84 >More info 0.85 >More info Control for tissue data Original data GEO bulk
107 B5 +AA -0.85 >More info -0.84 >More info B5 -AA B5 media and treated with AA Original data
108 chalazal seed coat mature green 0.85 >More info 0.84 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
109 peripherial endosperm 0.84 >More info 0.85 >More info Control for tissue data Original data GEO bulk
110 chalazal seed coat 0.84 >More info 0.85 >More info Control for tissue data Original data GEO bulk
111 Stamen stage15 0.84 >More info 0.84 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
112 QC 0.84 >More info 0.84 >More info Control for tissue data FACS-sorted protoplasts from roots Original data
113 seed coat heart stage 0.84 >More info 0.84 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
114 pericycle control 0.83 >More info 0.84 >More info Control for tissue data mock pericycle Original data GEO bulk
115 NAA +AA -0.84 >More info -0.83 >More info NAA -AA B5 media supplemented with 4.5 µM NAA and treated with AA Original data
116 seed coat mature green 0.84 >More info 0.83 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
117 seed coat 0.84 >More info 0.83 >More info Control for tissue data Original data GEO bulk
118 torpedo-root 0.83 >More info 0.83 >More info Control for tissue data Original data GEO bulk
119 Mature pollen 0.84 >More info 0.82 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
120 intact root control 0.82 >More info 0.84 >More info Control for tissue data mock whole root Original data GEO bulk
121 chalazal endosperm heart stage 0.83 >More info 0.82 >More info Control for tissue data chalazal endosperm captured by LCM Original data GEO bulk
122 epidermis control 0.82 >More info 0.83 >More info Control for tissue data mock epidermis Original data GEO bulk
123 Emwa1 inoculated psk 3 dpi 0.84 >More info 0.81 >More info Emwa1 inoculated WT 3 dpi Cotyledons Original data GEO bulk
124 pskr1-5 0.84 >More info 0.80 >More info wild type Cotyledons Original data GEO bulk
125 pollen 0.82 >More info 0.82 >More info Control for tissue data pollen grain Original data GEO bulk
126 in vitro pollen tube 0.82 >More info 0.81 >More info Control for tissue data pollen tube Original data
127 L17 phyA line -0.82 >More info -0.76 >More info WT seedling Original data GEO bulk
128 seed germinating in countinuous light 24h SL 0.90 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
129 Shoot apex inflorescence (after bolting) 0.88 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
130 Salicylic Acid 3 h -0.84 >More info -0.63 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
131 chalazal seed coat heart stage 0.84 >More info 0.35 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
132 ahg1-1 0.38 >More info 0.77 >More info ABA control Original data GEO bulk
133 GA4 3 h (ga1 seed) 0.43 >More info 0.64 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
134 Starch sheath 2 days NAA 0.64 >More info 0.42 >More info Starch sheath T0 Stem starch sheath under NAA in vitro treatment before cell divission laser capture microdissection Original data GEO bulk
135 ABA control 0.30 >More info 0.75 >More info No ABA control Original data GEO bulk
136 erf104-ko Flg22 4h -0.62 >More info -0.41 >More info erf104-ko H2O 4h Original data GEO bulk
137 phyABCDE Dark 0.35 >More info 0.67 >More info WT Dark Dark whole seedling Original data GEO bulk
138 Starch sheath 5 days MS incubation 0.53 >More info 0.47 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
139 torpedo-apical 0.87 >More info 0.11 >More info Control for tissue data torpedo embryo apical tissue Original data GEO bulk
140 Nuclei whole embryo 0.86 >More info 0.10 >More info Control for tissue data whole embryo Original data
141 clf-28 swn-7 0.40 >More info 0.55 >More info Col whole plant Original data GEO bulk
142 piffq 2d WL 0.30 >More info 0.65 >More info WT 2d WL whole seedling Original data GEO bulk
143 Starch sheath 2 days MS incubation 0.55 >More info 0.39 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
144 2hr continuous KCl and MSX control PeR cell -0.44 >More info -0.50 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
145 Heat shock optimum 0.25 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
146 Cs root -0.38 >More info -0.52 >More info control root Original data GEO bulk
147 ACN1-2 -0.33 >More info -0.57 >More info col-7 Original data GEO bulk
148 phyABDE Dark 0.28 >More info 0.60 >More info WT Dark Dark whole seedling Original data GEO bulk
149 fri-flc 0.26 >More info 0.62 >More info WT Original data GEO bulk
150 red illumination +lincomycin 0.31 >More info 0.57 >More info red illumination -lincomycin Original data GEO bulk
151 columella control 0.83 >More info 0.04 >More info Control for tissue data mock columella Original data GEO bulk
152 embryo ABA 0.29 >More info 0.58 >More info embryo-control ABA embryo Original data GEO bulk
153 Col BTH 0.19 >More info 0.67 >More info Col rosettes Original data GEO bulk
154 embryo paclobutrazol 0.29 >More info 0.57 >More info embryo-control paclobutrazol embryo Original data GEO bulk
155 gul2-1 bri1-5 mutant 0.31 >More info 0.54 >More info WT 7 day-old whole seedlings Original data
156 miR393 0h 0.50 >More info 0.35 >More info WT 0h Leaf tissue Original data GEO bulk
157 ptpks2 0.54 >More info 0.29 >More info Col-WT leaves Original data GEO bulk
158 Stem tissue 2 days NAA 0.58 >More info 0.25 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
159 mpk6-ko H2O 4h 0.58 >More info 0.24 >More info Col-0 H2O 4h Original data GEO bulk
160 sfr3 cold -0.57 >More info -0.25 >More info WT-cold aerial tissues Original data GEO bulk
161 2h KNO3 Whole root 0.58 >More info 0.24 >More info 2h KCl control Whole root Whole root Original data GEO bulk
162 WT Atum 1h 0.53 >More info 0.28 >More info WT 0h Leaf tissue Original data GEO bulk
163 gul2-1 mutant 0.22 >More info 0.59 >More info WT 7 day-old whole seedlings Original data
164 ACN1-2 Sucrose -0.19 >More info -0.61 >More info Col-7 Sucrose Original data GEO bulk
165 bri1-116 0.05 >More info 0.73 >More info Col seedling Original data GEO bulk
166 torpedo-cotyledon 0.85 >More info -0.09 >More info Control for tissue data Original data GEO bulk
167 dsr1 -0.17 >More info -0.58 >More info WT mock Whole seedling Original data GEO bulk
168 tcp13/+ tcp14/+ 0.23 >More info 0.52 >More info WT inflorescences Original data GEO bulk
169 met1-3 fourth-selfed generation -0.19 >More info -0.56 >More info Col WT leaf Original data GEO bulk
170 sng1 0.15 >More info 0.59 >More info WT aerial region Original data GEO bulk
171 Col ozone 3h -0.21 >More info -0.53 >More info Col clean-air 3h ozone Original data GEO bulk
172 Inflorescences Trp1 0.18 >More info 0.55 >More info Inflorescences ler inflorescences Original data GEO bulk
173 Full C2 T2 -0.23 >More info -0.50 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
174 FarRed Light 45min -0.07 >More info -0.63 >More info White Light 45min Original data Light treatments
175 TNT-seedlings 0.15 >More info 0.51 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
176 siliques AtHb1 control 0.14 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
177 4xX2x interploidy cross 0.10 >More info 0.55 >More info 2xX2x cross Original data GEO bulk
178 pab polysome 0.11 >More info 0.54 >More info WT polysome seedling shoot/aerial seedling Original data
179 rdr6-15 0.08 >More info 0.57 >More info Col-0 plant inflorescence Original data
180 Cocultivation 8 hrs leaf 0.51 >More info 0.11 >More info Mock cocultivation 8 hrs leaf Leaf Original data
181 Leafminer damaged seedlings 0.03 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
182 HSP90 Reduced RNAi-A3 -0.50 >More info -0.07 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
183 erf104-ko H2O 4h 0.54 >More info -0.00 >More info Col-0 H2O 4h Original data GEO bulk
184 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
185 35S::ERF104 H2O 4h 0.54 >More info -0.03 >More info Col-0 H2O 4h Original data GEO bulk
186 Laer pretreat GA Flg22 1h -0.22 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
187 NJ15 -0.05 >More info 0.53 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
188 cngc19 0.52 >More info -0.07 >More info Col-0 root Original data GEO bulk
189 Col0-PsmES4326-24hpi -0.17 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
190 tcp13 -0.11 >More info 0.54 >More info WT inflorescences Original data GEO bulk
191 estradiole-induced ANAC059 0.19 >More info -0.58 >More info transgenic (empty vector inducible system) Original data GEO bulk
192 cngc1-3 0.53 >More info -0.15 >More info Col-0 root Original data GEO bulk
193 IAA7mII over-expressor IAA Treated -0.37 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk