4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on sfr6 control
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List of experiments correlated with "sfr6 control"  Help Download transcriptome of top 30
Score Experiment Correlation from
sfr6 control		 Correlation to
sfr6 control		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 sfr6 control 1.00 >More info 1.00 >More info WT control All aerial tissue Original data GEO bulk
2 sfr2 control 0.83 >More info 0.83 >More info WT control All aerial tissue Original data GEO bulk
3 Shoot submergence 24h -0.67 >More info -0.75 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
4 Shoot dark control 7h -0.58 >More info -0.77 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
5 Shoot dark control 24h -0.59 >More info -0.75 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
6 spch -0.58 >More info -0.74 >More info Col-0 WT whole seedling Original data GEO bulk
7 Nicotinamide-93hr -0.55 >More info -0.74 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
8 leaf blade in D -0.55 >More info -0.72 >More info leaf blade in WL leaf blades Original data GEO bulk
9 Col-0 C2H4 24h -0.58 >More info -0.68 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
10 low CO2 + dark -0.55 >More info -0.71 >More info normal CO2 + light Original data GEO bulk
11 M6PR transgenic leaf 0mM NaCl -0.46 >More info -0.79 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
12 1 h Light IP RNA 0.52 >More info 0.71 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
13 exo70A1 -0.59 >More info -0.63 >More info Col-0 whole plant Original data GEO bulk
14 1 h Light Total RNA 0.51 >More info 0.71 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
15 mkk1/mkk2 24h BTH rep -0.63 >More info -0.59 >More info Col-0 24h BTH rep Original data GEO bulk
16 4d red light grown hmr-5 seedlings -0.52 >More info -0.69 >More info 4d red light grown WT(Col-0) seedlings Original data
17 sfr3 control 0.37 >More info 0.83 >More info WT control All aerial tissue Original data GEO bulk
18 Nicotinamide-65hr -0.51 >More info -0.68 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
19 6h volatiles Sm. R3089 -0.46 >More info -0.72 >More info 6h untreated whole seedling Original data GEO bulk
20 Pseudomonas -0.44 >More info -0.73 >More info Control pseudomonas treated whole seedling Original data GEO bulk
21 Nicotinamide-69hr -0.47 >More info -0.69 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
22 seedling 1.5h after HZE atm-1 -0.44 >More info -0.72 >More info seedling day 1 unirradiated atm-1 1.5h Original data
23 petiole in FRD -0.55 >More info -0.60 >More info petiole in WL petioles Original data GEO bulk
24 Nicotinamide-89hr -0.52 >More info -0.63 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
25 leaf blade in FRD -0.56 >More info -0.59 >More info leaf blade in WL leaf blades Original data GEO bulk
26 gun4-1 -0.48 >More info -0.67 >More info WT Col-0 seedling Original data GEO bulk
27 WT drought 0.73 >More info 0.41 >More info WT control All aerial tissue Original data GEO bulk
28 Root submergence 24h -0.55 >More info -0.58 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
29 Nicotinamide-73hr -0.43 >More info -0.70 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
30 cngc4 -0.48 >More info -0.64 >More info Ws-2 Seedlings Original data GEO bulk
31 Day Time Treatment 0.44 >More info 0.67 >More info Day Time Control 1hr white light pulse aerial rosette Original data
32 gun5 norflurazon -0.50 >More info -0.61 >More info gun5 control Original data GEO bulk
33 petiole in D -0.52 >More info -0.59 >More info petiole in WL petioles Original data GEO bulk
34 Nicotinamide-49hr -0.47 >More info -0.64 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
35 Dark 3day hml -0.57 >More info -0.53 >More info 0h hml Original data
36 Dark 6h ivd -0.52 >More info -0.58 >More info 0h ivd Original data
37 Ws leaf 100mM NaCl -0.45 >More info -0.65 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
38 Ws 100mM NaCl -0.45 >More info -0.65 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
39 WT (Col) glucose 0.36 >More info 0.74 >More info WT (Col) glucose seedlings Original data GEO bulk
40 detached inflorescences 24h -0.42 >More info -0.67 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
41 Dark 2day hml -0.62 >More info -0.47 >More info 0h hml Original data
42 low CO2 + light -0.37 >More info -0.71 >More info normal CO2 + light Original data GEO bulk
43 seedling 1.5h after HZE WT -0.45 >More info -0.63 >More info seedling day 1 unirradiated WT 1.5h Original data
44 Night Time Treatment 0.47 >More info 0.60 >More info Night Time Control 1hr white light pulse aerial rosette Original data
45 Dark 3day ivd -0.51 >More info -0.55 >More info 0h ivd Original data
46 WT hypoxia -0.47 >More info -0.59 >More info WT normoxia whole rosette Original data
47 pap1-D/tt4 -0.47 >More info -0.59 >More info Col-0 aerial part Original data
48 WOX1-1 -0.44 >More info -0.62 >More info Col-0 aerial part Original data
49 Lipopolysaccaride4 h (leaf) -0.42 >More info -0.63 >More info Mock 4 h (leaf) Original data Elicitor treatments
50 msh1 stunt -0.39 >More info -0.66 >More info WT Col-0 above ground part of plant Original data GEO bulk
51 MYB12OX/tt4 -0.42 >More info -0.63 >More info Col-0 aerial part Original data
52 cca1-lhy before light -0.47 >More info -0.58 >More info before light whole seedlings Original data GEO bulk
53 Root submergence 7h -0.47 >More info -0.58 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
54 gun1-9 norflurazon -0.58 >More info -0.46 >More info gun1-9 control Original data GEO bulk
55 shoots WT 0uM Fe -0.50 >More info -0.54 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
56 Col(gl) leaf 0mM NaCl -0.36 >More info -0.68 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
57 Col(gl) 0mM NaCl -0.36 >More info -0.68 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
58 Col-0 under 4 days salt -0.46 >More info -0.58 >More info Col-0 under control 4 days salt treatment rosette Original data
59 Dark 1day hml -0.54 >More info -0.49 >More info 0h hml Original data
60 pnp1-1 3h +P -0.44 >More info -0.59 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
61 Dry pre-dawn 0.34 >More info 0.69 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
62 12h volatiles Sm. R3089 -0.41 >More info -0.62 >More info 12h untreated whole seedling Original data GEO bulk
63 Dark 3day wt -0.51 >More info -0.51 >More info 0h wt Original data
64 ASL9-ox 0.49 >More info 0.53 >More info WT aerial parts of seedlings Original data GEO bulk
65 Root dark control 24h -0.43 >More info -0.59 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
66 phyABDE Rc50 0.56 >More info 0.45 >More info phyABDE Dark red light whole seedling Original data GEO bulk
67 IMI 4mM -0.35 >More info -0.66 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
68 M6PR transgenic 0mM NaCl -0.36 >More info -0.65 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
69 Dark 6h hml -0.53 >More info -0.47 >More info 0h hml Original data
70 Dark 2day wt -0.53 >More info -0.47 >More info 0h wt Original data
71 Dark 6h wt -0.49 >More info -0.51 >More info 0h wt Original data
72 pap1-D -0.44 >More info -0.56 >More info Col-0 aerial part Original data
73 Mutant coi1(leaf) 0.54 >More info 0.45 >More info Col-0 (leaf) Original data GEO bulk
74 cop1 Seedling BL -0.51 >More info -0.48 >More info WT Seedling BL Original data GEO bulk
75 Leafminer systemically damaged thaliana seedlings -0.41 >More info -0.58 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
76 tt4 -0.41 >More info -0.58 >More info Col-0 aerial part Original data
77 Cocultivation 8 hrs leaf -0.29 >More info -0.70 >More info Mock cocultivation 8 hrs leaf Leaf Original data
78 ein2 mutant roots mock 0.52 >More info 0.46 >More info roots mock Original data GEO bulk
79 OsRLCK253 expressing 0.36 >More info 0.62 >More info WT seedlings Original data GEO bulk
80 mil4 -0.42 >More info -0.56 >More info Col rosettes Original data GEO bulk
81 oas-a1.1 root 0.28 >More info 0.69 >More info WT-Untreated Root Original data GEO bulk
82 Root dark control 7h -0.39 >More info -0.58 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
83 rosette leaves lcr -0.44 >More info -0.52 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
84 mutant acs2C (single mutant) -0.51 >More info -0.44 >More info col control (single mutant) Original data GEO bulk
85 Osmotic Stress 24 h (shoot) -0.55 >More info -0.39 >More info Stress mock 24 h (shoot) Original data Stress treatments
86 flu dark 8hours/30 minute light -0.50 >More info -0.44 >More info col dark 8hours/30 minute light Original data GEO bulk
87 aphid saliva treated -0.43 >More info -0.51 >More info control aphid saliva treated leaves Original data GEO bulk
88 Col leaf 100mM NaCl -0.42 >More info -0.52 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
89 Col leaf 100mM NaCl -0.42 >More info -0.52 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
90 Myzus persicae saliva -0.43 >More info -0.51 >More info Control Original data GEO bulk
91 24h light (+Lincomycin) -0.42 >More info -0.52 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
92 Col 100mM NaCl -0.42 >More info -0.52 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
93 xyl-grown cell culture- 1h 1mM Fru 0.32 >More info 0.62 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
94 Laer treat paclobutrazol (PAC) -0.52 >More info -0.41 >More info Laer Control leaf discs Original data GEO bulk
95 IAA 3 h -0.41 >More info -0.52 >More info Mock 3 h Original data Basic hormone treatment of seedlings
96 aerial organ callus inducing medium 12 h -0.40 >More info -0.52 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
97 AVG 3 h 0.29 >More info 0.63 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
98 TNT-seedlings -0.41 >More info -0.51 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
99 Nicotinamide-57hr -0.39 >More info -0.52 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
100 pip3 At2g19270 TDNA 9 -0.30 >More info -0.61 >More info Col-0 whole plant Original data GEO bulk
101 bri1-116 0.18 >More info 0.73 >More info Col seedling Original data GEO bulk
102 rosette leaves fdh -0.38 >More info -0.52 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
103 Nicotinamide-53hr -0.28 >More info -0.62 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
104 roots bhlh100/101 0uM Fe -0.32 >More info -0.58 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
105 seedling 24h after Gamma atm-1 0.33 >More info 0.56 >More info seedling day 2 unirradiated atm-1 24h Original data
106 shoot-10 μM DEX- 6 hr -0.34 >More info -0.55 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
107 WT-16ºC 0.36 >More info 0.53 >More info WT-23ºC Original data GEO bulk
108 4h decapitation 0.26 >More info 0.63 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
109 Whole root - low pH 48H -0.27 >More info -0.62 >More info Whole root - Std pH 48H pH 4.6 for 48 hr Original data GEO bulk
110 SA 4mM -0.19 >More info -0.70 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
111 Shoot apex inflorescence (after bolting) 0.23 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
112 max3GR24 (1 uM) 0.23 >More info 0.65 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
113 WT cold 0.38 >More info 0.50 >More info WT control All aerial tissue Original data GEO bulk
114 Sulfometuron EC50 -0.38 >More info -0.50 >More info Carrier Original data GEO bulk
115 Col-0 shade -0.35 >More info -0.53 >More info Col-0 light seedlings Original data GEO bulk
116 WT Seedling BL+ABA -0.53 >More info -0.34 >More info WT Seedling BL Original data GEO bulk
117 hai1-2 low water potential -0.30 >More info -0.57 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
118 tmm1-inflorescence-tips 0.28 >More info 0.58 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
119 shl-2 Pool -0.19 >More info -0.66 >More info Ler Pool seedling Original data GEO bulk
120 ACC 3 h -0.27 >More info -0.58 >More info Mock 3 h Original data Basic hormone treatment of seedlings
121 EBE-XVE +estradiol -0.51 >More info -0.33 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
122 P.syringae vir 4 h (leaf) -0.31 >More info -0.53 >More info Mock 4 h (leaf) Original data Elicitor treatments
123 Nicotinamide-85hr -0.32 >More info -0.52 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
124 seedling 30 min S Exp -0.50 >More info -0.33 >More info seedling -S Exp seedling Original data
125 penta mutant (higher order mutant) -0.29 >More info -0.54 >More info col control (higher order mutant) Original data GEO bulk
126 AFB1 0h -0.31 >More info -0.52 >More info Col 0h Leaf Original data GEO bulk
127 +1.6 mM Tween 20 1 h. -0.33 >More info -0.50 >More info +distilled water 1 h. Original data GEO bulk
128 Nicotinamide-77hr -0.29 >More info -0.53 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
129 ein2-1 +elf18 2h 0.29 >More info 0.53 >More info WT +elf18 2h elf18 Original data GEO bulk
130 sfr6 drought 0.22 >More info 0.60 >More info WT drought All aerial tissue Original data GEO bulk
131 Col-0 ozone- (control genotype tga2 tag5 tga6) -0.55 >More info -0.26 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
132 vtc1-1 0.18 >More info 0.63 >More info Col-0 whole plant Original data GEO bulk
133 8h-DC3000 avrRpm1 -0.20 >More info -0.61 >More info 8h-DC3000 leaves Original data GEO bulk
134 mil4 sid2 -0.31 >More info -0.50 >More info Col rosettes Original data GEO bulk
135 MYB12OX -0.31 >More info -0.50 >More info Col-0 aerial part Original data
136 RGA-GR-DEX -0.24 >More info -0.57 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
137 NahG -0.29 >More info -0.51 >More info Col-0 Leaves Original data GEO bulk
138 tunicamycin 0.23 >More info 0.56 >More info DMF Original data GEO bulk
139 toc1-1-93hr -0.26 >More info -0.53 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
140 atmyc2 cop1 Seedling BL -0.25 >More info -0.54 >More info WT Seedling BL Original data GEO bulk
141 aba2 1% sucrose 12-day-old -0.25 >More info -0.53 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
142 seed germinating in countinuous light 24h SL 0.11 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
143 ptpks2 0.12 >More info 0.65 >More info Col-WT leaves Original data GEO bulk
144 ein3 eil1 JA 0.27 >More info 0.50 >More info JA Whole seedling Original data GEO bulk
145 anti-sense for AtAOX1a -0.18 >More info -0.59 >More info WT Original data GEO bulk
146 ein2-1 +Pep2 2h 0.25 >More info 0.52 >More info WT +Pep2 2h Pep2 Original data GEO bulk
147 high-R:FR bud axillary 0.26 >More info 0.51 >More info low-R:FR bud axillary high R rosette axillary bud n-2 Original data GEO bulk
148 IAA7mII over-expressor IAA Treated 0.07 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
149 Col-0 SA -0.20 >More info -0.56 >More info Col-0 Original data GEO bulk
150 sid2 -0.23 >More info -0.53 >More info Col rosettes Original data GEO bulk
151 gun1-9 control 0.23 >More info 0.52 >More info Col-0 control Original data GEO bulk
152 AAF-OX -0.19 >More info -0.56 >More info Col-0 Rosette leaf Original data GEO bulk
153 sex1-3 0.00 >More info -0.75 >More info Col-WT leaves Original data GEO bulk
154 0.2µM SMX 0.25 >More info 0.50 >More info control Whole seedling Original data GEO bulk
155 24h volatiles Sm. R3089 -0.22 >More info -0.51 >More info 24h untreated whole seedling Original data GEO bulk
156 seedling 24h after Gamma WT 0.18 >More info 0.55 >More info seedling day 2 unirradiated WT 24h Original data
157 cat2-short-day 4d -0.13 >More info -0.58 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
158 SOS1 0mM NaCl -0.17 >More info -0.53 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
159 ein2 1% sucrose 14-day-old 0.14 >More info 0.55 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
160 shoot control p35S 0.19 >More info 0.50 >More info shoot control total Original data GEO bulk
161 aphid infested -0.10 >More info -0.59 >More info control aphid infested Leaves Original data GEO bulk
162 aphid infested -0.10 >More info -0.59 >More info CTR Original data GEO bulk
163 AtMinD1 Prolonged-induction -0.51 >More info -0.17 >More info Control whole plant Original data GEO bulk
164 fil-8 yab3-2 -0.13 >More info -0.55 >More info wt Apices Original data GEO bulk
165 Mutant ein2(leaf) 0.18 >More info 0.50 >More info Col-0 (leaf) Original data GEO bulk
166 eds16 whole leaf 1dpi -0.53 >More info -0.14 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
167 Shoot submergence 7h -0.66 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
168 bio4-1 mutant leaves -0.15 >More info -0.51 >More info WT leaves leaves Original data GEO bulk
169 SCR-GR Time 1H Dex -0.09 >More info -0.55 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
170 Roots Cd 0.08 >More info 0.56 >More info Roots control Cd Root Original data GEO bulk
171 camta1-2 -0.12 >More info -0.52 >More info Col-0-WT Original data GEO bulk
172 ORS1 induced -0.06 >More info -0.58 >More info mock-induced rosette leaves Original data GEO bulk
173 toc1-1-77hr -0.08 >More info -0.53 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
174 ABA JA 24h 0.04 >More info -0.65 >More info EtOH 24h 24hr Original data GEO bulk
175 Laer pretreat GA Flg22 1h -0.11 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
176 CCA1-ox 6am non-polysomal 0.07 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
177 pif4pif5 mut dark 0.01 >More info 0.57 >More info WT dark Original data GEO bulk
178 Dark 2day ivd -0.53 >More info -0.01 >More info 0h ivd Original data
179 des1.1 -0.02 >More info -0.51 >More info Leaves-WT leaf Original data GEO bulk
180 etr1 1% sucrose 12-day-old -0.04 >More info 0.57 >More info Col-0 1% sucrose 12-day-old Original data GEO bulk
181 3x(p) 0.08 >More info -0.60 >More info 2x two week old seedlings Original data
182 E.orontii Infection 3 day 0.11 >More info -0.53 >More info Uninfection 3 day Original data Elicitor treatments
183 Col BTH -0.27 >More info 0.67 >More info Col rosettes Original data GEO bulk
184 3x(m) 0.22 >More info -0.62 >More info 2x two week old seedlings Original data
185 AGL24 induced 0.14 >More info -0.53 >More info WT-ESTRADIOL Original data GEO bulk
186 Heat shock optimum -0.37 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
187 siliques AtHb1 control -0.25 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
188 Col0-PsmES4326-24hpi -0.41 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
189 Leafminer damaged seedlings -0.43 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk