4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on phyB Rc50
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List of experiments correlated with "phyB Rc50"  Help Download transcriptome of top 30
Score Experiment Correlation from
phyB Rc50		 Correlation to
phyB Rc50		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 phyB Rc50 1.00 >More info 1.00 >More info WT(Ler) Rc50 Original data GEO bulk
2 spch 0.61 >More info 0.62 >More info Col-0 WT whole seedling Original data GEO bulk
3 P.syringae vir 4 h (leaf) 0.52 >More info 0.66 >More info Mock 4 h (leaf) Original data Elicitor treatments
4 phyB Dark 0.54 >More info 0.58 >More info WT(Ler) Dark Original data GEO bulk
5 etiolated cop1BBX22-GFPox 0.48 >More info 0.63 >More info etiolated Col-0 whole seedlings Original data GEO bulk
6 9 hr Hypoxia 1 hr recovery Total RNA 0.52 >More info 0.54 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
7 WT+H2O2 0.56 >More info 0.49 >More info WT H2O2 Original data GEO bulk
8 bri1-116 0.30 >More info 0.73 >More info Col seedling Original data GEO bulk
9 phyAphyB Dark -0.47 >More info -0.56 >More info phyB Dark Original data GEO bulk
10 cngc4 0.42 >More info 0.60 >More info Ws-2 Seedlings Original data GEO bulk
11 TNT-seedlings 0.49 >More info 0.51 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
12 toc1-1-85hr 0.38 >More info 0.62 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
13 Nicotinamide-65hr 0.44 >More info 0.56 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
14 CabpBVR2 -0.55 >More info -0.43 >More info WT Original data GEO bulk
15 WT-16ºC -0.34 >More info -0.64 >More info WT-23ºC Original data GEO bulk
16 Root dark control 24h 0.46 >More info 0.52 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
17 atmyc2 cop1 Seedling BL 0.45 >More info 0.53 >More info WT Seedling BL Original data GEO bulk
18 shoot control pRBCS 0.42 >More info 0.55 >More info shoot control total Original data GEO bulk
19 AFB1 0h 0.40 >More info 0.55 >More info Col 0h Leaf Original data GEO bulk
20 4d red light grown hmr-5 seedlings 0.43 >More info 0.52 >More info 4d red light grown WT(Col-0) seedlings Original data
21 Nicotinamide-93hr 0.42 >More info 0.52 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
22 prors1-2 leaves 0.38 >More info 0.55 >More info Col-0 leaves leaves Original data
23 AgNO3 3 h 0.39 >More info 0.53 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
24 cat2-short-day 4d 0.38 >More info 0.54 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
25 low CO2 + light 0.40 >More info 0.52 >More info normal CO2 + light Original data GEO bulk
26 root longitudinal zone-4 pH 4.6 0.35 >More info 0.57 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
27 SCR 48hr-S 0.56 >More info 0.35 >More info SCR 0hr endodermis Original data
28 Nicotinamide-81hr 0.38 >More info 0.53 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
29 Nicotinamide-57hr 0.40 >More info 0.51 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
30 Nicotinamide-53hr 0.35 >More info 0.56 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
31 Col BTH 0.23 >More info 0.67 >More info Col rosettes Original data GEO bulk
32 ein2 mutant roots mock -0.32 >More info -0.58 >More info roots mock Original data GEO bulk
33 WT (Col) glucose -0.34 >More info -0.55 >More info WT (Col) glucose seedlings Original data GEO bulk
34 Nicotinamide-89hr 0.35 >More info 0.54 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
35 npr1-3 DCA 48h 0.60 >More info 0.29 >More info npr1-3 MOCK 48h Original data GEO bulk
36 Nicotinamide-73hr 0.33 >More info 0.55 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
37 toc1-1-73hr 0.27 >More info 0.61 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
38 Col-0 under 4 days salt 0.53 >More info 0.34 >More info Col-0 under control 4 days salt treatment rosette Original data
39 Nicotinamide-61hr 0.37 >More info 0.50 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
40 Nicotinamide-85hr 0.34 >More info 0.52 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
41 cop1 Seedling BL 0.35 >More info 0.51 >More info WT Seedling BL Original data GEO bulk
42 NJ15 0.21 >More info 0.65 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
43 detached inflorescences 24h 0.31 >More info 0.54 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
44 atmyc2 Seedling BL+ABA -0.50 >More info -0.35 >More info WT Seedling BL+ABA Original data GEO bulk
45 SCR 24hr-S 0.50 >More info 0.34 >More info SCR 0hr endodermis Original data
46 gun4-1 0.30 >More info 0.54 >More info WT Col-0 seedling Original data GEO bulk
47 toc1-1-53hr 0.18 >More info 0.65 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
48 Nicotinamide-69hr 0.32 >More info 0.51 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
49 bak1-3 +Pep2 10h 0.32 >More info 0.51 >More info WT +Pep2 10h Pep2 Original data GEO bulk
50 csn4-1 mutant 0.50 >More info 0.32 >More info WT dark Original data GEO bulk
51 9 hr Hypoxia Total RNA 0.29 >More info 0.53 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
52 Col0-PsmES4326-24hpi 0.20 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
53 msh1 stunt 0.29 >More info 0.52 >More info WT Col-0 above ground part of plant Original data GEO bulk
54 pif5 low R/FR 0.52 >More info 0.28 >More info Col-0 low R/FR low R/FR seedlings Original data GEO bulk
55 JA 0.29 >More info 0.50 >More info Col-0 mock Whole seedling Original data GEO bulk
56 Leaf wounded 0.29 >More info 0.50 >More info Leaf control vegetative leaf Original data GEO bulk
57 piffq FR 24h -0.21 >More info -0.57 >More info WT FR 24h whole seedling Original data GEO bulk
58 Rose Bengal 0.5 uM 0.17 >More info 0.60 >More info Control RB and PER Rose Bengal Original data
59 Chemically 0.50 >More info 0.26 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
60 ACC 3 h 0.22 >More info 0.54 >More info Mock 3 h Original data Basic hormone treatment of seedlings
61 elf3-7-23ºC -0.22 >More info -0.53 >More info WT-23ºC Original data GEO bulk
62 24h volatiles Sp. HRO-C48 0.20 >More info 0.54 >More info 24h untreated whole seedling Original data GEO bulk
63 Col whole leaf 3dpi 0.09 >More info 0.63 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
64 Cs root -0.18 >More info -0.54 >More info control root Original data GEO bulk
65 arf6 arf8 stage3 0.52 >More info 0.17 >More info WT stage3 Original data GEO bulk
66 Imbibed 1 h (seed) 0.15 >More info 0.53 >More info Dry seed Original data Time course of early seed germination
67 Shoot apex inflorescence (after bolting) 0.03 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
68 ACN1-2 0.13 >More info 0.55 >More info col-7 Original data GEO bulk
69 shoot hypoxia pRBCS 0.18 >More info 0.50 >More info shoot hypoxia total Original data GEO bulk
70 toc1-1-77hr 0.15 >More info 0.52 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
71 17 0h total -0.17 >More info -0.50 >More info 27 0h total whole seedlings floating on MS medium Original data
72 CCA1-ox 6am non-polysomal 0.14 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
73 tga2 tga5 tga6 ozone -0.50 >More info -0.14 >More info Col-0 ozone- (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
74 4h decapitation -0.13 >More info -0.50 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
75 Heat shock optimum -0.02 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
76 sfr6 drought -0.12 >More info -0.51 >More info WT drought All aerial tissue Original data GEO bulk
77 Roots Cd -0.08 >More info -0.54 >More info Roots control Cd Root Original data GEO bulk
78 Leafminer damaged seedlings 0.03 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
79 ABA JA 24h 0.02 >More info 0.55 >More info EtOH 24h 24hr Original data GEO bulk
80 SCR-GR Time 1H Dex 0.05 >More info 0.51 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
81 seed germinating in countinuous light 24h SL -0.11 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
82 Laer pretreat GA Flg22 1h -0.15 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
83 IAA7mII over-expressor IAA Treated -0.17 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
84 siliques AtHb1 control -0.02 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
85 FarRed Light 45min 0.07 >More info -0.56 >More info White Light 45min Original data Light treatments
86 sim smr1 0.10 >More info -0.54 >More info WT seedling Original data GEO bulk
87 cpr5 sim smr1 0.07 >More info -0.50 >More info WT seedling Original data GEO bulk
88 Red/FR Light45min -0.16 >More info 0.53 >More info FarRed Light 45min Original data Light treatments
89 SHR-GR Time 6H Dex 0.20 >More info -0.54 >More info SHR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk