intact root control

4.0:Analysis result - correlation network

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Module-based correlation network(MCN) centered on intact root control

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List of experiments correlated with "intact root control"

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Score	Experiment	Correlation from intact root control	Correlation to intact root control	Control Experiment	Treatment	Tissue	Link to original data	Experimental Category
1	intact root control	1.00 >More info	1.00 >More info	Control for tissue data	mock	whole root	Original data	GEO bulk
2	epidermis control	0.89 >More info	0.90 >More info	Control for tissue data	mock	epidermis	Original data	GEO bulk
3	pericycle control	0.89 >More info	0.89 >More info	Control for tissue data	mock	pericycle	Original data	GEO bulk
4	QC	0.88 >More info	0.89 >More info	Control for tissue data		FACS-sorted protoplasts from roots	Original data
5	Mature roots	0.87 >More info	0.86 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
6	Callus	0.86 >More info	0.86 >More info	Control for tissue data		callus	Original data	GEO bulk
7	seed coat heart stage	0.86 >More info	0.86 >More info	Control for tissue data		seed coat captured by LCM	Original data	GEO bulk
8	Section Root from70 mm to 340 mm harvested immediately	0.85 >More info	0.87 >More info	Control for tissue data			Original data	GEO bulk
9	chalazal seed coat	0.87 >More info	0.85 >More info	Control for tissue data			Original data	GEO bulk
10	peripheral endosperm mature green	0.86 >More info	0.85 >More info	Control for tissue data		peripherial endosperm captured by LCM	Original data	GEO bulk
11	embryo proper mature green	0.86 >More info	0.85 >More info	Control for tissue data		embryo proper captured by LCM	Original data	GEO bulk
12	chalazal endosperm	0.86 >More info	0.85 >More info	Control for tissue data			Original data	GEO bulk
13	whole seeds	0.86 >More info	0.85 >More info	Control for tissue data			Original data	GEO bulk
14	Hypocotyl	0.86 >More info	0.85 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
15	whole seeds heart stage	0.85 >More info	0.86 >More info	Control for tissue data		whole seeds captured by LCM	Original data	GEO bulk
16	micropylar endosperm mature green	0.86 >More info	0.85 >More info	Control for tissue data		micropylar endosperm captured by LCM	Original data	GEO bulk
17	embryo proper	0.86 >More info	0.85 >More info	Control for tissue data			Original data	GEO bulk
18	Regenerating Stump Root Tip Cut 130 mm andn Recut 13 hrs Taking 70 mm of Stump (4dpg)	0.85 >More info	0.85 >More info	Control for tissue data			Original data	GEO bulk
19	root hair	0.85 >More info	0.85 >More info	Control for tissue data		root hairs	Original data	GEO bulk
20	chalazal endosperm mature green	0.86 >More info	0.84 >More info	Control for tissue data		chalazal endosperm captured by LCM	Original data	GEO bulk
21	cortex	0.84 >More info	0.86 >More info	Control for tissue data		cortex	Original data	GEO bulk
22	peripheral endosperm heart stage	0.85 >More info	0.85 >More info	Control for tissue data		peripheral endosperm captured by LCM	Original data	GEO bulk
23	seed germinating in countinuous light 48 h SL	0.85 >More info	0.85 >More info	Control for tissue data		seed	Original data	GEO bulk
24	chalazal seed coat mature green	0.87 >More info	0.83 >More info	Control for tissue data		chalazal seed coat captured by LCM	Original data	GEO bulk
25	peripherial endosperm	0.85 >More info	0.85 >More info	Control for tissue data			Original data	GEO bulk
26	Regenerating Stump Root Tip Cut 130 mm andn Recut 22 hrs Taking 70 mm of Stump (4dpg)	0.85 >More info	0.85 >More info	Control for tissue data			Original data	GEO bulk
27	whole seeds mature green	0.86 >More info	0.84 >More info	Control for tissue data		whole seeds captured by LCM	Original data	GEO bulk
28	embryo proper heart stage	0.85 >More info	0.85 >More info	Control for tissue data		embryo proper captured by LCM	Original data	GEO bulk
29	seed coat mature green	0.87 >More info	0.83 >More info	Control for tissue data		seed coat captured by LCM	Original data	GEO bulk
30	Regenerating Stump Root Tip Cut 130 mm andn Recut 5 hrs Taking 70 mm of Stump (4dpg)	0.85 >More info	0.85 >More info	Control for tissue data			Original data	GEO bulk
31	seed coat	0.86 >More info	0.84 >More info	Control for tissue data			Original data	GEO bulk
32	Stem 1st node	0.85 >More info	0.84 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
33	Petiol (leaf7)	0.85 >More info	0.84 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
34	micropylar endosperm heart stage	0.84 >More info	0.85 >More info	Control for tissue data		micropylar endosperm captured by LCM	Original data	GEO bulk
35	Stem 2ndinternode	0.85 >More info	0.84 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
36	Regenerating Stump Root Tip Cut 130 mm andn Recut 0 hrs Taking 70 mm of Stump (8 dpg)	0.84 >More info	0.85 >More info	Control for tissue data			Original data	GEO bulk
37	Regenerating Stump Root Tip Cut 130 mm andn Recut 0 hrs Taking 70 mm of Stump (4dpg)	0.84 >More info	0.85 >More info	Control for tissue data			Original data	GEO bulk
38	chalazal endosperm heart stage	0.85 >More info	0.84 >More info	Control for tissue data		chalazal endosperm captured by LCM	Original data	GEO bulk
39	Root from tip to 130 mm proximal to tip (cut 4dpg)	0.84 >More info	0.85 >More info	Control for tissue data			Original data	GEO bulk
40	lec1-1 Mature Green Seed	0.84 >More info	0.85 >More info	Control for tissue data			Original data	GEO bulk
41	mature endodermis glcal	0.83 >More info	0.85 >More info	Control for tissue data		endodermis	Original data	GEO bulk
42	seed germinating in countinuous light 6 h SL	0.84 >More info	0.84 >More info	Control for tissue data		seed	Original data	GEO bulk
43	differentiating xylem	0.84 >More info	0.84 >More info	Control for tissue data		xylem	Original data	GEO bulk
44	Shoot apex vegetative &Young leaves	0.84 >More info	0.84 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
45	median nectary stage 14-15	0.83 >More info	0.85 >More info	Control for tissue data		median nectaries	Original data	GEO bulk
46	Distal half (leaf7)	0.85 >More info	0.83 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
47	Proximalhalf (leaf7)	0.85 >More info	0.83 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
48	lec1-1 Post-Mature Green Seed	0.84 >More info	0.84 >More info	Control for tissue data			Original data	GEO bulk
49	phloem sieve cells and companion cells	0.84 >More info	0.84 >More info	Control for tissue data		phloem	Original data	GEO bulk
50	seedling	0.84 >More info	0.84 >More info	Control for tissue data		seedling	Original data	GEO bulk
51	Cells whole embryo	0.83 >More info	0.85 >More info	Control for tissue data		whole embryo	Original data
52	Atape2 low light	0.84 >More info	0.84 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
53	Root from tip to 130 mm proximal to tip (cut 8dpg)	0.84 >More info	0.84 >More info	Control for tissue data			Original data	GEO bulk
54	Shoot apex vegetative	0.84 >More info	0.84 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
55	Shoot apex transition (before bolting)	0.84 >More info	0.84 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
56	seed germinating in countinuous light 12 h SL	0.84 >More info	0.84 >More info	Control for tissue data		seed	Original data	GEO bulk
57	Ambient CO2 fully expanded leaf	0.85 >More info	0.83 >More info	Control for tissue data		fully expanded leaf	Original data
58	Ambient CO2 expanding leaf	0.85 >More info	0.83 >More info	Control for tissue data		expanding leaf	Original data
59	Ambient CO2 leaf primordia	0.84 >More info	0.83 >More info	Control for tissue data		leaf primordia	Original data
60	Cotyledons	0.84 >More info	0.83 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
61	Leaf	0.85 >More info	0.82 >More info	Control for tissue data		leaf	Original data	GEO bulk
62	Petals stage15	0.83 >More info	0.84 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
63	lateral nectary stage 11-12	0.83 >More info	0.84 >More info	Control for tissue data		lateral nectaries	Original data	GEO bulk
64	lec1-1 Globular Stage Seed	0.83 >More info	0.84 >More info	Control for tissue data			Original data	GEO bulk
65	Pedicels stage15	0.84 >More info	0.83 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
66	Rosette leaf No12	0.84 >More info	0.83 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
67	lec1-1 Cotyledon Stage Seed	0.83 >More info	0.84 >More info	Control for tissue data			Original data	GEO bulk
68	Nuclei proembryo	0.82 >More info	0.85 >More info	Control for tissue data		proembryo	Original data
69	Sepals stage15	0.84 >More info	0.83 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
70	lateral nectary stage 14-15	0.83 >More info	0.84 >More info	Control for tissue data		lateral nectaries	Original data	GEO bulk
71	Senescing leaf	0.84 >More info	0.83 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
72	HMG	0.84 >More info	0.83 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
73	S17	0.84 >More info	0.83 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
74	Cauline leaves	0.84 >More info	0.83 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
75	torpedo-basal	0.83 >More info	0.84 >More info	Control for tissue data		torpedo embryo basal tissue	Original data	GEO bulk
76	Apex 5DAS	0.83 >More info	0.83 >More info	Control for tissue data			Original data	GEO bulk
77	Seeds stage8 w/o siliques	0.83 >More info	0.83 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
78	lec1-1 24h post-fertilization Seed	0.83 >More info	0.83 >More info	Control for tissue data			Original data	GEO bulk
79	seed germinating in countinuous light 1 h SL	0.84 >More info	0.82 >More info	Control for tissue data		seed	Original data	GEO bulk
80	Bud	0.83 >More info	0.83 >More info	Control for tissue data		pollen grains and tubes	Original data
81	Inflorescences ler	0.83 >More info	0.83 >More info	Control for tissue data		inflorescences	Original data	GEO bulk
82	Nuclei suspensor	0.82 >More info	0.84 >More info	Control for tissue data		suspensor	Original data
83	KAN1	0.83 >More info	0.83 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
84	LAS	0.83 >More info	0.83 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
85	ovule	0.83 >More info	0.83 >More info	Control for tissue data		ovule	Original data	GEO bulk
86	seed during stratification 48 h S	0.84 >More info	0.82 >More info	Control for tissue data		seed	Original data	GEO bulk
87	EL (leaves 1-2) 14DAS	0.83 >More info	0.83 >More info	Control for tissue data			Original data	GEO bulk
88	B5 +AA	-0.83 >More info	-0.83 >More info	B5 -AA	B5 media and treated with AA		Original data
89	Seeds stage3 with siliques	0.83 >More info	0.83 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
90	Expanding leaf	0.83 >More info	0.83 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
91	silique	0.82 >More info	0.84 >More info	Control for tissue data		silique	Original data	GEO bulk
92	WT cotyledons	0.84 >More info	0.82 >More info	Control for tissue data		cotyledons	Original data
93	seed during stratification 12 h S	0.84 >More info	0.82 >More info	Control for tissue data		seed	Original data	GEO bulk
94	Flower (stage12)	0.83 >More info	0.83 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
95	Rosette leaf No2	0.84 >More info	0.82 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
96	Apex 14DAS	0.83 >More info	0.83 >More info	Control for tissue data			Original data	GEO bulk
97	unpollinated pistil	0.83 >More info	0.83 >More info	Control for tissue data		pistil	Original data	GEO bulk
98	NAA +AA	-0.84 >More info	-0.82 >More info	NAA -AA	B5 media supplemented with 4.5 µM NAA and treated with AA		Original data
99	HDG4	0.83 >More info	0.83 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
100	AtHB8	0.83 >More info	0.83 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
101	Carpels stage15	0.83 >More info	0.82 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
102	Flowers stage15	0.83 >More info	0.82 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
103	in vivo pollen tube	0.82 >More info	0.83 >More info	Control for tissue data		pollen tube	Original data	GEO bulk
104	leaf	0.83 >More info	0.82 >More info	Control for tissue data		leaf	Original data	GEO bulk
105	Col dryseed	0.83 >More info	0.82 >More info	Control for tissue data		dry seeds	Original data
106	heart-stage-root	0.81 >More info	0.84 >More info	Control for tissue data			Original data	GEO bulk
107	dry seed 0 h	0.83 >More info	0.82 >More info	Control for tissue data		seed	Original data	GEO bulk
108	seed freshly harvested H	0.83 >More info	0.82 >More info	Control for tissue data		seed	Original data	GEO bulk
109	Anther	0.82 >More info	0.83 >More info	Control for tissue data		anther	Original data
110	siliques	0.83 >More info	0.82 >More info	Control for tissue data			Original data	GEO bulk
111	flowers	0.82 >More info	0.83 >More info	Control for tissue data			Original data	GEO bulk
112	torpedo-meristem	0.81 >More info	0.83 >More info	Control for tissue data		torpedo embryo meristem tissue	Original data	GEO bulk
113	ML (Mature leaves) 35DAS	0.83 >More info	0.81 >More info	Control for tissue data			Original data	GEO bulk
114	globular-apical	0.81 >More info	0.83 >More info	Control for tissue data		globular embryo apical tissue	Original data	GEO bulk
115	globular-basal	0.81 >More info	0.83 >More info	Control for tissue data		globular embryo basal tissue	Original data	GEO bulk
116	heart-stage-cotyledon	0.81 >More info	0.83 >More info	Control for tissue data			Original data	GEO bulk
117	flower-buds	0.82 >More info	0.82 >More info	Control for tissue data			Original data	GEO bulk
118	Stamen stage15	0.82 >More info	0.82 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
119	flower	0.82 >More info	0.82 >More info	Control for tissue data		flower	Original data	GEO bulk
120	seed during stratification 1 h S	0.82 >More info	0.82 >More info	Control for tissue data		seed	Original data	GEO bulk
121	torpedo-root	0.81 >More info	0.82 >More info	Control for tissue data			Original data	GEO bulk
122	Emwa1 inoculated psk 3 dpi	0.82 >More info	0.80 >More info	Emwa1 inoculated WT 3 dpi		Cotyledons	Original data	GEO bulk
123	pskr1-5	0.82 >More info	0.79 >More info	wild type		Cotyledons	Original data	GEO bulk
124	pollen	0.79 >More info	0.80 >More info	Control for tissue data		pollen grain	Original data	GEO bulk
125	Mature pollen	0.79 >More info	0.80 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
126	in vitro pollen tube	0.80 >More info	0.79 >More info	Control for tissue data		pollen tube	Original data
127	L17 phyA line	-0.82 >More info	-0.72 >More info	WT		seedling	Original data	GEO bulk
128	seed germinating in countinuous light 24h SL	0.85 >More info	0.67 >More info	Control for tissue data		seed	Original data	GEO bulk
129	Shoot apex inflorescence (after bolting)	0.84 >More info	0.65 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
130	Salicylic Acid 3 h	-0.82 >More info	-0.51 >More info	Mock 3 h			Original data	Effect of other inhibitors on seedlings
131	chalazal seed coat heart stage	0.86 >More info	0.35 >More info	Control for tissue data		chalazal seed coat captured by LCM	Original data	GEO bulk
132	2h KNO3 Whole root	0.69 >More info	0.42 >More info	2h KCl control Whole root		Whole root	Original data	GEO bulk
133	6m.KCl	-0.64 >More info	-0.45 >More info	To.	KCl	14 day old Roots	Original data	GEO bulk
134	Col BTH	0.38 >More info	0.67 >More info	Col		rosettes	Original data	GEO bulk
135	cngc19	0.67 >More info	0.32 >More info	Col-0		root	Original data	GEO bulk
136	6m.KNO3	-0.61 >More info	-0.38 >More info	To.	KNO3	14 day old Roots	Original data	GEO bulk
137	QC pSCR 3h BL	0.54 >More info	0.44 >More info	QC pSCR 0h BL	brassinosteroid	root	Original data
138	3m.KCl	-0.60 >More info	-0.37 >More info	To.	KCl	14 day old Roots	Original data	GEO bulk
139	Heat shock optimum	0.31 >More info	0.65 >More info	Heat shock baseline	Photosynthesis at optimum temperature	leaf first fully expanded	Original data	GEO bulk
140	3m.KNO3	-0.59 >More info	-0.35 >More info	To.	KNO3	14 day old Roots	Original data	GEO bulk
141	columella control	0.89 >More info	0.04 >More info	Control for tissue data	mock	columella	Original data	GEO bulk
142	torpedo-apical	0.82 >More info	0.11 >More info	Control for tissue data		torpedo embryo apical tissue	Original data	GEO bulk
143	Nuclei whole embryo	0.82 >More info	0.10 >More info	Control for tissue data		whole embryo	Original data
144	Starch sheath 2 days NAA	0.56 >More info	0.35 >More info	Starch sheath T0	Stem starch sheath under NAA in vitro treatment before cell divission	laser capture microdissection	Original data	GEO bulk
145	cngc1-3	0.66 >More info	0.22 >More info	Col-0		root	Original data	GEO bulk
146	root cells columella root cap -Fe	-0.31 >More info	-0.57 >More info	whole roots standard			Original data	GEO bulk
147	Norflurazon	0.51 >More info	0.29 >More info	Col-0			Original data	GEO bulk
148	Norflurazon	0.51 >More info	0.29 >More info	WT-Contrl	a herbicide (Norflurazon)	seedling	Original data	GEO bulk
149	Leafminer damaged seedlings	0.22 >More info	0.56 >More info	Healthy seedlings		leaves	Original data	GEO bulk
150	mpk6-ko H2O 4h	0.58 >More info	0.19 >More info	Col-0 H2O 4h			Original data	GEO bulk
151	sfr3 cold	-0.56 >More info	-0.20 >More info	WT-cold		aerial tissues	Original data	GEO bulk
152	Col0-PsmES4326-24hpi	0.15 >More info	0.61 >More info	Col0-mock-24hpi		leaf	Original data	GEO bulk
153	2hr continuous KCl and MSX control PeR cell	-0.23 >More info	-0.51 >More info	2hr KCl control PeR cell		Pericycle root cells	Original data	GEO bulk
154	QC pSCR 8h BL	0.58 >More info	0.15 >More info	QC pSCR 0h BL	brassinosteroid	root	Original data
155	Laer pretreat GA Flg22 1h	0.02 >More info	0.71 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
156	torpedo-cotyledon	0.81 >More info	-0.09 >More info	Control for tissue data			Original data	GEO bulk
157	35S::ERF104 H2O 4h	0.55 >More info	0.15 >More info	Col-0 H2O 4h			Original data	GEO bulk
158	tcp13/+ tcp14/+	0.16 >More info	0.54 >More info	WT		inflorescences	Original data	GEO bulk
159	siliques AtHb1 control	0.17 >More info	0.52 >More info	siliques WT control	control	silique	Original data	GEO bulk
160	24h light (+Lincomycin)	0.57 >More info	0.12 >More info	24h light (-Lincomycin)		seedlings	Original data	GEO bulk
161	opr3 OPDA 8 h	0.14 >More info	0.54 >More info	opr3 0 h			Original data	GEO bulk
162	Ovary	-0.11 >More info	-0.54 >More info	Seedling			Original data	GEO bulk
163	Col-0 norflurazon	0.50 >More info	0.14 >More info	Col-0 control			Original data	GEO bulk
164	root - 08% oxygen - 30min	0.11 >More info	0.52 >More info	root - 21% oxygen - 30min			Original data	GEO bulk
165	Chemically	-0.06 >More info	-0.56 >More info	Solvent	treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid	whole seedlings	Original data
166	rdr6-15	0.03 >More info	0.59 >More info	Col-0		plant inflorescence	Original data
167	toc1-1-81hr	-0.11 >More info	-0.50 >More info	WT-untreated-81hr	none	seedlings aerial tissue	Original data	GEO bulk
168	Aerobic e1 ate2	0.09 >More info	0.52 >More info	Aerobic Col-0	aerobic (normal) conditions	seedlings	Original data	GEO bulk
169	xyl-grown cell culture- 1h 1mM Suc	-0.07 >More info	-0.53 >More info	xyl-grown cell culture- 1h 1mM Xyl		cell culture	Original data
170	erf104-ko Flg22 4h	-0.51 >More info	-0.05 >More info	erf104-ko H2O 4h			Original data	GEO bulk
171	elevated CO2 high Mg shoot	0.50 >More info	0.06 >More info	atmospheric CO2 high Mg shoot		Shoot	Original data
172	Hypoxic e1 ate	0.05 >More info	0.50 >More info	Hypoxic Col-0	hypoxic conditions	seedlings	Original data	GEO bulk
173	MPK6 ox Shoot Hypoxia	0.03 >More info	0.52 >More info	WT Shoot Normoxia (mock)	Hypoxia	Shoot	Original data	GEO bulk
174	Elevated CO2 LIMITING N DAY	-0.03 >More info	-0.51 >More info	Elevated CO2 AMPLE N DAY		Youngest Most Fully Expanded Leaf	Original data
175	erf104-ko H2O 4h	0.51 >More info	0.02 >More info	Col-0 H2O 4h			Original data	GEO bulk
176	tcp13	0.01 >More info	0.50 >More info	WT		inflorescences	Original data	GEO bulk
177	CCA1-ox 6am non-polysomal	-0.02 >More info	0.51 >More info	WT 6am non-polysomal		aerial part	Original data
178	Polysomal RNA 35S:AtCSP1-FH1	-0.04 >More info	0.51 >More info	Polysomal RNA csp1	12h non-stress	rosettes	Original data	GEO bulk
179	bri1-116	-0.32 >More info	0.73 >More info	Col		seedling	Original data	GEO bulk
180	estradiole-induced ANAC059	0.18 >More info	-0.54 >More info	transgenic (empty vector inducible system)			Original data	GEO bulk
181	IAA7mII over-expressor IAA Treated	-0.40 >More info	0.69 >More info	empty vector IAA Treated			Original data	GEO bulk
182	root - 08% oxygen - 48h	-0.24 >More info	0.50 >More info	root - 21% oxygen - 48h			Original data	GEO bulk