4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on seed freshly harvested H
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List of experiments correlated with "seed freshly harvested H"  Help Download transcriptome of top 30
Score Experiment Correlation from
seed freshly harvested H
Correlation to
seed freshly harvested H
Control Experiment Genotype Treatment Tissue Link to
original data
Experimental
Category
Data set
Details
1 seed freshly harvested H 1.00 >More info 1.00 >More info Control for tissue data seed Original data GEO bulk
2 dry seed 0 h 0.98 >More info 0.98 >More info Control for tissue data seed Original data GEO bulk
3 seed during stratification 1 h S 0.97 >More info 0.97 >More info Control for tissue data seed Original data GEO bulk
4 seed during stratification 12 h S 0.96 >More info 0.95 >More info Control for tissue data seed Original data GEO bulk
5 Col dryseed 0.94 >More info 0.93 >More info Control for tissue data dry seeds Original data
6 Seeds stage8 w/o siliques 0.92 >More info 0.91 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
7 seed germinating in countinuous light 6 h SL 0.89 >More info 0.91 >More info Control for tissue data seed Original data GEO bulk
8 seed germinating in countinuous light 1 h SL 0.90 >More info 0.90 >More info Control for tissue data seed Original data GEO bulk
9 seed during stratification 48 h S 0.90 >More info 0.90 >More info Control for tissue data seed Original data GEO bulk
10 lec1-1 Post-Mature Green Seed 0.90 >More info 0.89 >More info Control for tissue data Original data GEO bulk
11 seed germinating in countinuous light 12 h SL 0.88 >More info 0.90 >More info Control for tissue data seed Original data GEO bulk
12 lec1-1 Mature Green Seed 0.88 >More info 0.89 >More info Control for tissue data Original data GEO bulk
13 Leaf 0.87 >More info 0.87 >More info Control for tissue data leaf Original data GEO bulk
14 Petals stage15 0.87 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
15 Regenerating Stump Root Tip Cut 130 mm andn Recut
13 hrs Taking 70 mm of Stump (4dpg)
0.85 >More info 0.88 >More info Control for tissue data Original data GEO bulk
16 Callus 0.85 >More info 0.88 >More info Control for tissue data callus Original data GEO bulk
17 median nectary stage 14-15 0.86 >More info 0.87 >More info Control for tissue data median nectaries Original data GEO bulk
18 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (8 dpg)
0.85 >More info 0.88 >More info Control for tissue data Original data GEO bulk
19 Root from tip to 130 mm proximal to tip (cut
4dpg)
0.85 >More info 0.88 >More info Control for tissue data Original data GEO bulk
20 seed germinating in countinuous light 48 h SL 0.85 >More info 0.88 >More info Control for tissue data seed Original data GEO bulk
21 lateral nectary stage 14-15 0.86 >More info 0.87 >More info Control for tissue data lateral nectaries Original data GEO bulk
22 Apex 5DAS 0.86 >More info 0.86 >More info Control for tissue data Original data GEO bulk
23 lec1-1 24h post-fertilization Seed 0.86 >More info 0.86 >More info Control for tissue data Original data GEO bulk
24 Inflorescences ler 0.85 >More info 0.87 >More info Control for tissue data inflorescences Original data GEO bulk
25 Carpels stage15 0.85 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
26 lateral nectary stage 11-12 0.86 >More info 0.86 >More info Control for tissue data lateral nectaries Original data GEO bulk
27 Flowers stage15 0.85 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
28 in vivo pollen tube 0.85 >More info 0.87 >More info Control for tissue data pollen tube Original data GEO bulk
29 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (4dpg)
0.85 >More info 0.87 >More info Control for tissue data Original data GEO bulk
30 Sepals stage15 0.86 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
31 Regenerating Stump Root Tip Cut 130 mm andn Recut
22 hrs Taking 70 mm of Stump (4dpg)
0.85 >More info 0.87 >More info Control for tissue data Original data GEO bulk
32 Atape2 low light 0.85 >More info 0.87 >More info Control for tissue data shoot apical meristem Original data GEO bulk
33 Root from tip to 130 mm proximal to tip (cut
8dpg)
0.84 >More info 0.88 >More info Control for tissue data Original data GEO bulk
34 Senescing leaf 0.86 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
35 Section Root from70 mm to 340 mm harvested
immediately
0.85 >More info 0.87 >More info Control for tissue data Original data GEO bulk
36 Shoot apex vegetative 0.85 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
37 S17 0.85 >More info 0.87 >More info Control for tissue data shoot apical meristem Original data GEO bulk
38 Stem 1st node 0.85 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
39 Cotyledons 0.86 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
40 Bud 0.85 >More info 0.86 >More info Control for tissue data pollen grains and tubes Original data
41 KAN1 0.85 >More info 0.86 >More info Control for tissue data shoot apical meristem Original data GEO bulk
42 Shoot apex vegetative &Young leaves 0.85 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
43 Mature roots 0.84 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
44 ovule 0.85 >More info 0.86 >More info Control for tissue data ovule Original data GEO bulk
45 Rosette leaf No12 0.85 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
46 Proximalhalf (leaf7) 0.86 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
47 lec1-1 Cotyledon Stage Seed 0.85 >More info 0.86 >More info Control for tissue data Original data GEO bulk
48 flower 0.85 >More info 0.86 >More info Control for tissue data flower Original data GEO bulk
49 Seeds stage3 with siliques 0.85 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
50 Expanding leaf 0.86 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
51 WT cotyledons 0.85 >More info 0.86 >More info Control for tissue data cotyledons Original data
52 Flower (stage12) 0.85 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
53 Rosette leaf No2 0.86 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
54 seedling 0.85 >More info 0.86 >More info Control for tissue data seedling Original data GEO bulk
55 unpollinated pistil 0.85 >More info 0.86 >More info Control for tissue data pistil Original data GEO bulk
56 HDG4 0.84 >More info 0.87 >More info Control for tissue data shoot apical meristem Original data GEO bulk
57 Shoot apex transition (before bolting) 0.84 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
58 siliques 0.85 >More info 0.86 >More info Control for tissue data Original data GEO bulk
59 Ambient CO2 fully expanded leaf 0.85 >More info 0.86 >More info Control for tissue data fully expanded leaf Original data
60 flowers 0.85 >More info 0.86 >More info Control for tissue data Original data GEO bulk
61 Cauline leaves 0.86 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
62 Regenerating Stump Root Tip Cut 130 mm andn Recut
5 hrs Taking 70 mm of Stump (4dpg)
0.84 >More info 0.87 >More info Control for tissue data Original data GEO bulk
63 torpedo-basal 0.84 >More info 0.87 >More info Control for tissue data torpedo embryo basal tissue Original data GEO bulk
64 Ambient CO2 leaf primordia 0.84 >More info 0.86 >More info Control for tissue data leaf primordia Original data
65 root hair 0.85 >More info 0.85 >More info Control for tissue data root hairs Original data GEO bulk
66 peripheral endosperm mature green 0.85 >More info 0.85 >More info Control for tissue data peripherial endosperm captured by LCM Original data GEO bulk
67 Petiol (leaf7) 0.85 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
68 embryo proper mature green 0.86 >More info 0.84 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
69 flower-buds 0.85 >More info 0.85 >More info Control for tissue data Original data GEO bulk
70 lec1-1 Globular Stage Seed 0.84 >More info 0.86 >More info Control for tissue data Original data GEO bulk
71 LAS 0.84 >More info 0.86 >More info Control for tissue data shoot apical meristem Original data GEO bulk
72 Distal half (leaf7) 0.86 >More info 0.84 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
73 Pedicels stage15 0.85 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
74 Hypocotyl 0.85 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
75 Stem 2ndinternode 0.85 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
76 ML (Mature leaves) 35DAS 0.86 >More info 0.84 >More info Control for tissue data Original data GEO bulk
77 Stamen stage15 0.85 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
78 silique 0.85 >More info 0.85 >More info Control for tissue data silique Original data GEO bulk
79 Nuclei proembryo 0.84 >More info 0.86 >More info Control for tissue data proembryo Original data
80 Cells whole embryo 0.84 >More info 0.86 >More info Control for tissue data whole embryo Original data
81 AtHB8 0.84 >More info 0.86 >More info Control for tissue data shoot apical meristem Original data GEO bulk
82 micropylar endosperm mature green 0.85 >More info 0.85 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
83 Anther 0.84 >More info 0.86 >More info Control for tissue data anther Original data
84 HMG 0.84 >More info 0.86 >More info Control for tissue data shoot apical meristem Original data GEO bulk
85 whole seeds mature green 0.85 >More info 0.85 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
86 Ambient CO2 expanding leaf 0.85 >More info 0.85 >More info Control for tissue data expanding leaf Original data
87 Nuclei suspensor 0.84 >More info 0.85 >More info Control for tissue data suspensor Original data
88 chalazal endosperm mature green 0.85 >More info 0.84 >More info Control for tissue data chalazal endosperm captured by LCM Original data GEO bulk
89 EL (leaves 1-2) 14DAS 0.85 >More info 0.84 >More info Control for tissue data Original data GEO bulk
90 leaf 0.85 >More info 0.84 >More info Control for tissue data leaf Original data GEO bulk
91 phloem sieve cells and companion cells 0.84 >More info 0.85 >More info Control for tissue data phloem Original data GEO bulk
92 chalazal seed coat mature green 0.85 >More info 0.84 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
93 heart-stage-root 0.83 >More info 0.86 >More info Control for tissue data Original data GEO bulk
94 mature endodermis glcal 0.84 >More info 0.84 >More info Control for tissue data endodermis Original data GEO bulk
95 differentiating xylem 0.84 >More info 0.84 >More info Control for tissue data xylem Original data GEO bulk
96 torpedo-meristem 0.84 >More info 0.84 >More info Control for tissue data torpedo embryo meristem tissue Original data GEO bulk
97 cortex 0.83 >More info 0.85 >More info Control for tissue data cortex Original data GEO bulk
98 whole seeds 0.84 >More info 0.84 >More info Control for tissue data Original data GEO bulk
99 Apex 14DAS 0.85 >More info 0.83 >More info Control for tissue data Original data GEO bulk
100 globular-apical 0.83 >More info 0.85 >More info Control for tissue data globular embryo apical tissue Original data GEO bulk
101 globular-basal 0.83 >More info 0.85 >More info Control for tissue data globular embryo basal tissue Original data GEO bulk
102 heart-stage-cotyledon 0.83 >More info 0.85 >More info Control for tissue data Original data GEO bulk
103 embryo proper 0.83 >More info 0.85 >More info Control for tissue data Original data GEO bulk
104 micropylar endosperm heart stage 0.82 >More info 0.85 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
105 pollen 0.83 >More info 0.84 >More info Control for tissue data pollen grain Original data GEO bulk
106 peripheral endosperm heart stage 0.83 >More info 0.84 >More info Control for tissue data peripheral endosperm captured by LCM Original data GEO bulk
107 peripherial endosperm 0.83 >More info 0.84 >More info Control for tissue data Original data GEO bulk
108 chalazal seed coat 0.83 >More info 0.84 >More info Control for tissue data Original data GEO bulk
109 embryo proper heart stage 0.82 >More info 0.85 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
110 seed coat mature green 0.84 >More info 0.83 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
111 torpedo-root 0.83 >More info 0.83 >More info Control for tissue data Original data GEO bulk
112 chalazal endosperm 0.82 >More info 0.84 >More info Control for tissue data Original data GEO bulk
113 B5 +AA -0.83 >More info -0.83 >More info B5 -AA B5 media and treated with AA Original data
114 QC 0.82 >More info 0.84 >More info Control for tissue data FACS-sorted protoplasts from roots Original data
115 Mature pollen 0.83 >More info 0.83 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
116 NAA +AA -0.83 >More info -0.83 >More info NAA -AA B5 media supplemented with 4.5 µM NAA and treated with AA Original data
117 seed coat 0.83 >More info 0.83 >More info Control for tissue data Original data GEO bulk
118 pericycle control 0.81 >More info 0.84 >More info Control for tissue data mock pericycle Original data GEO bulk
119 whole seeds heart stage 0.82 >More info 0.83 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
120 seed coat heart stage 0.82 >More info 0.83 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
121 intact root control 0.82 >More info 0.83 >More info Control for tissue data mock whole root Original data GEO bulk
122 in vitro pollen tube 0.83 >More info 0.82 >More info Control for tissue data pollen tube Original data
123 chalazal endosperm heart stage 0.81 >More info 0.82 >More info Control for tissue data chalazal endosperm captured by LCM Original data GEO bulk
124 epidermis control 0.80 >More info 0.83 >More info Control for tissue data mock epidermis Original data GEO bulk
125 Emwa1 inoculated psk 3 dpi 0.83 >More info 0.80 >More info Emwa1 inoculated WT 3 dpi Cotyledons Original data GEO bulk
126 pskr1-5 0.83 >More info 0.79 >More info wild type Cotyledons Original data GEO bulk
127 L17 phyA line -0.82 >More info -0.76 >More info WT seedling Original data GEO bulk
128 seed germinating in countinuous light 24h SL 0.86 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
129 Shoot apex inflorescence (after bolting) 0.85 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
130 Salicylic Acid 3 h -0.82 >More info -0.66 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
131 chalazal seed coat heart stage 0.83 >More info 0.35 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
132 embryo ABA 0.44 >More info 0.67 >More info embryo-control ABA embryo Original data GEO bulk
133 ahg1-1 0.43 >More info 0.66 >More info ABA control Original data GEO bulk
134 ABA control 0.31 >More info 0.78 >More info No ABA control Original data GEO bulk
135 embryo paclobutrazol 0.44 >More info 0.62 >More info embryo-control paclobutrazol embryo Original data GEO bulk
136 clf-28 swn-7 0.45 >More info 0.58 >More info Col whole plant Original data GEO bulk
137 24h SL WT -0.30 >More info -0.69 >More info 0 h WT seed Original data
138 phyABCDE Dark 0.28 >More info 0.70 >More info WT Dark Dark whole seedling Original data GEO bulk
139 Imbibed 24 h ABA 30uM (seed) 0.35 >More info 0.62 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
140 fri-flc 0.30 >More info 0.66 >More info WT Original data GEO bulk
141 torpedo-apical 0.84 >More info 0.11 >More info Control for tissue data torpedo embryo apical tissue Original data GEO bulk
142 Nuclei whole embryo 0.84 >More info 0.10 >More info Control for tissue data whole embryo Original data
143 GA4 3 h (ga1 seed) 0.38 >More info 0.54 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
144 24h SL Attim 17-1 1 -0.26 >More info -0.66 >More info 0 h Attim 17-1 1 seed Original data
145 ACN1-2 -0.35 >More info -0.57 >More info col-7 Original data GEO bulk
146 Col BTH 0.24 >More info 0.67 >More info Col rosettes Original data GEO bulk
147 erf104-ko Flg22 4h -0.59 >More info -0.32 >More info erf104-ko H2O 4h Original data GEO bulk
148 gul2-1 bri1-5 mutant 0.35 >More info 0.55 >More info WT 7 day-old whole seedlings Original data
149 gul2-1 mutant 0.32 >More info 0.58 >More info WT 7 day-old whole seedlings Original data
150 piffq 2d WL 0.21 >More info 0.65 >More info WT 2d WL whole seedling Original data GEO bulk
151 columella control 0.81 >More info 0.04 >More info Control for tissue data mock columella Original data GEO bulk
152 6 h SL WT -0.27 >More info -0.57 >More info 0 h WT seed Original data
153 rosettes WT drought 0.29 >More info 0.54 >More info rosettes WT watered Original data GEO bulk
154 rosettes myoox drought 0.28 >More info 0.54 >More info rosettes myoox watered Original data GEO bulk
155 phyABDE Dark 0.20 >More info 0.62 >More info WT Dark Dark whole seedling Original data GEO bulk
156 red illumination +lincomycin 0.28 >More info 0.54 >More info red illumination -lincomycin Original data GEO bulk
157 Heat shock optimum 0.16 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
158 ACN1-2 Sucrose -0.23 >More info -0.58 >More info Col-7 Sucrose Original data GEO bulk
159 abi3-6 16 DAF Seed -0.21 >More info -0.60 >More info WT (Col-0) 16 DAF Seed developing seeds dissected from sliques Original data
160 Light 3day hml 0.25 >More info 0.55 >More info 0h hml Original data
161 Cs root -0.28 >More info -0.52 >More info control root Original data GEO bulk
162 6 h SL Attim 17-1 1 -0.25 >More info -0.54 >More info 0 h Attim 17-1 1 seed Original data
163 ged1 seedlings -0.22 >More info -0.57 >More info Ws seedlings Original data GEO bulk
164 Ws seedlings 0.22 >More info 0.57 >More info ged1 seedlings Original data GEO bulk
165 hai1-2 low water potential 0.26 >More info 0.50 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
166 Starch sheath 2 days NAA 0.53 >More info 0.22 >More info Starch sheath T0 Stem starch sheath under NAA in vitro treatment before cell divission laser capture microdissection Original data GEO bulk
167 siliques AtHb1 control 0.23 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
168 torpedo-cotyledon 0.83 >More info -0.09 >More info Control for tissue data Original data GEO bulk
169 etiolated atbzip16 0.22 >More info 0.51 >More info etiolated Ler etiolated aerial part of seedlings Original data GEO bulk
170 FarRed Light 45min -0.10 >More info -0.62 >More info White Light 45min Original data Light treatments
171 Cocultivation 8 hrs leaf 0.55 >More info 0.16 >More info Mock cocultivation 8 hrs leaf Leaf Original data
172 whole roots 140 mM NaCl 4 hour 0.14 >More info 0.56 >More info whole roots standard Original data GEO bulk
173 Leafminer damaged seedlings 0.14 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
174 3 hour 5929745 -0.50 >More info -0.20 >More info 3 hour control (no chemical ) Original data GEO bulk
175 bri1-116 -0.03 >More info 0.73 >More info Col seedling Original data GEO bulk
176 met1-3 fourth-selfed generation -0.18 >More info -0.52 >More info Col WT leaf Original data GEO bulk
177 4xX2x interploidy cross 0.16 >More info 0.53 >More info 2xX2x cross Original data GEO bulk
178 ANAC102 knock-out low oxygen -0.13 >More info -0.55 >More info Col-0 low oxygen Original data GEO bulk
179 MPK6 ox Shoot Hypoxia -0.18 >More info -0.50 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
180 dsr1 -0.07 >More info -0.58 >More info WT mock Whole seedling Original data GEO bulk
181 Col0-PsmES4326-24hpi 0.03 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
182 sng1 0.14 >More info 0.50 >More info WT aerial region Original data GEO bulk
183 Stem tissue 2 days NAA 0.53 >More info 0.10 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
184 Laer pretreat GA Flg22 1h -0.13 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
185 NJ15 -0.01 >More info 0.59 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
186 Ibuprofen 3 h 0.05 >More info 0.50 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
187 pab polysome -0.01 >More info 0.56 >More info WT polysome seedling shoot/aerial seedling Original data
188 ABI3GR +DEX +CHX -0.02 >More info 0.54 >More info ABI3GR -DEX +CHX DEX CHX root/protoplasts Original data GEO bulk
189 opr3 OPDA 2 h 0.00 >More info 0.50 >More info opr3 0 h Original data GEO bulk
190 CCA1-ox 6am non-polysomal -0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
191 GA 120min -0.07 >More info 0.50 >More info CON120 GA 120 min. root tips Original data GEO bulk
192 IAA7mII over-expressor IAA Treated -0.30 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk