4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on phyABCDE Rc50
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "phyABCDE Rc50"  Help Download transcriptome of top 30
Score Experiment Correlation from
phyABCDE Rc50		 Correlation to
phyABCDE Rc50		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 phyABCDE Rc50 1.00 >More info 1.00 >More info phyABCDE Dark red light whole seedling Original data GEO bulk
2 phyABCDE 4-day dark- 2 hours Rc50 0.76 >More info 0.84 >More info phyABCDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
3 phyABDE Rc50 0.75 >More info 0.76 >More info phyABDE Dark red light whole seedling Original data GEO bulk
4 phyABCDE Dark -0.67 >More info -0.71 >More info WT Dark Dark whole seedling Original data GEO bulk
5 etiolated atbzip16 -0.53 >More info -0.74 >More info etiolated Ler etiolated aerial part of seedlings Original data GEO bulk
6 embryo paclobutrazol -0.61 >More info -0.50 >More info embryo-control paclobutrazol embryo Original data GEO bulk
7 embryo ABA -0.56 >More info -0.54 >More info embryo-control ABA embryo Original data GEO bulk
8 clf-28 swn-7 -0.49 >More info -0.58 >More info Col whole plant Original data GEO bulk
9 ABA control -0.37 >More info -0.70 >More info No ABA control Original data GEO bulk
10 abi3-6 16 DAF Seed 0.48 >More info 0.59 >More info WT (Col-0) 16 DAF Seed developing seeds dissected from sliques Original data
11 pil5 dark 0.60 >More info 0.46 >More info Col-0 dark Original data GEO bulk
12 ahg1-1 -0.38 >More info -0.68 >More info ABA control Original data GEO bulk
13 Shoot apex inflorescence (after bolting) 0.38 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
14 GA4 3 h (ga1 seed) -0.55 >More info -0.47 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
15 Shoot submergence 24h -0.58 >More info -0.44 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
16 Imbibed 24 h ABA 30uM (seed) -0.32 >More info -0.69 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
17 Ws seedlings -0.51 >More info -0.48 >More info ged1 seedlings Original data GEO bulk
18 ged1 seedlings 0.51 >More info 0.48 >More info Ws seedlings Original data GEO bulk
19 phyABDE Dark -0.39 >More info -0.60 >More info WT Dark Dark whole seedling Original data GEO bulk
20 gul2-1 bri1-5 mutant -0.57 >More info -0.41 >More info WT 7 day-old whole seedlings Original data
21 WT Red light 18h 0.46 >More info 0.52 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
22 Col-0 red light 0.54 >More info 0.42 >More info Col-0 dark Original data GEO bulk
23 piffq 2d WL -0.36 >More info -0.59 >More info WT 2d WL whole seedling Original data GEO bulk
24 Dark 4 h pls RedLight 1min 0.26 >More info 0.67 >More info Dark 4 h Original data Light treatments
25 Col-Luc WT 3h antimycin A -0.53 >More info -0.39 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
26 Col-0 low oxygen -0.57 >More info -0.35 >More info Col-0 Original data GEO bulk
27 Estradiol4 days -0.34 >More info -0.58 >More info Col Original data GEO bulk
28 estradiol induced LEC1 -0.34 >More info -0.58 >More info control Original data GEO bulk
29 Day Time Treatment 0.56 >More info 0.34 >More info Day Time Control 1hr white light pulse aerial rosette Original data
30 pif3 Dark 0h 0.36 >More info 0.52 >More info WT Dark 0h etiolated seedling Original data GEO bulk
31 ACN1-2 Sucrose 0.35 >More info 0.52 >More info Col-7 Sucrose Original data GEO bulk
32 abi3-6 12 DAF Seed 0.35 >More info 0.52 >More info WT (Col-0) 12 DAF Seed-3 developing seeds dissected from sliques Original data
33 WT polysome 0.60 >More info 0.26 >More info WT non-polysome Original data GEO bulk
34 mkk1/mkk2 control rep -0.60 >More info -0.26 >More info Col-0 Time 0 rep Original data GEO bulk
35 IAA7mII over-expressor IAA Treated 0.16 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
36 fri-flc -0.30 >More info -0.54 >More info WT Original data GEO bulk
37 pad4-PsmES4326-24hpi 0.56 >More info 0.25 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
38 pskr1-5 0.60 >More info 0.20 >More info wild type Cotyledons Original data GEO bulk
39 short 17-degree- 0.64 >More info 0.16 >More info control short Original data GEO bulk
40 dsr1 0.24 >More info 0.56 >More info WT mock Whole seedling Original data GEO bulk
41 bri1-116 0.07 >More info 0.73 >More info Col seedling Original data GEO bulk
42 EL (leaves 1-2) 14DAS 0.58 >More info 0.20 >More info Control for tissue data Original data GEO bulk
43 WT cotyledons 0.56 >More info 0.22 >More info Control for tissue data cotyledons Original data
44 Propiconazole 3 h 0.56 >More info 0.22 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
45 Night Time Treatment 0.50 >More info 0.26 >More info Night Time Control 1hr white light pulse aerial rosette Original data
46 erf104-ko H2O 4h 0.53 >More info 0.23 >More info Col-0 H2O 4h Original data GEO bulk
47 Emwa1 inoculated psk 3 dpi 0.58 >More info 0.18 >More info Emwa1 inoculated WT 3 dpi Cotyledons Original data GEO bulk
48 seed germinating in countinuous light 24h SL 0.09 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
49 Leafminer damaged seedlings 0.19 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
50 Transgenic LEC2GR Seedling 1h Dex 0.52 >More info 0.22 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
51 20d after anthesis -0.55 >More info -0.19 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
52 WT NAA/flg 2h -0.50 >More info -0.23 >More info WT 0h Leaf tissue Original data GEO bulk
53 sid2 -0.55 >More info -0.17 >More info Col rosettes Original data GEO bulk
54 Bud 0.54 >More info 0.18 >More info Control for tissue data pollen grains and tubes Original data
55 Rosette leaf No12 0.54 >More info 0.18 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
56 ML (Mature leaves) 35DAS 0.54 >More info 0.18 >More info Control for tissue data Original data GEO bulk
57 leaf 0.54 >More info 0.18 >More info Control for tissue data leaf Original data GEO bulk
58 Ambient CO2 expanding leaf 0.50 >More info 0.22 >More info Control for tissue data expanding leaf Original data
59 Dark 4 h pls UV-A 5 min 0.20 >More info 0.52 >More info Dark 4 h Original data Light treatments
60 mil4 BTH -0.54 >More info -0.17 >More info Col BTH rosettes Original data GEO bulk
61 35S::ERF104 H2O 4h 0.54 >More info 0.17 >More info Col-0 H2O 4h Original data GEO bulk
62 mil4 sid2 -0.53 >More info -0.18 >More info Col rosettes Original data GEO bulk
63 Inflorescences ler 0.51 >More info 0.20 >More info Control for tissue data inflorescences Original data GEO bulk
64 Apex 5DAS 0.56 >More info 0.14 >More info Control for tissue data Original data GEO bulk
65 WT seedlings NaCl 0.54 >More info 0.16 >More info WT seedlings control Seedlings Original data GEO bulk
66 Flower (stage12) 0.53 >More info 0.17 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
67 Seeds stage3 with siliques 0.50 >More info 0.20 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
68 camta1/2/3 warm -0.50 >More info -0.20 >More info WT warm entire aerial part Original data GEO bulk
69 T101D 10mM NH4NO3 -0.19 >More info -0.51 >More info col 10mM NH4NO3 Root Original data
70 flower-buds 0.52 >More info 0.17 >More info Control for tissue data Original data GEO bulk
71 Apex 14DAS 0.51 >More info 0.18 >More info Control for tissue data Original data GEO bulk
72 Expanding leaf 0.53 >More info 0.15 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
73 Heat shock optimum 0.03 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
74 tbf1-elf18 0.61 >More info 0.07 >More info WT-elf18 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
75 Pedicels stage15 0.52 >More info 0.15 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
76 chalazal endosperm pre-globular -0.51 >More info -0.16 >More info whole seed sections pre-globular Original data GEO bulk
77 Cocultivation 8 hrs root -0.53 >More info -0.14 >More info Mock cocultivation 8 hrs root Root Original data
78 micropylar endosperm pre-globular -0.50 >More info -0.15 >More info whole seed sections pre-globular Original data GEO bulk
79 Col-O low light -0.51 >More info -0.14 >More info Col-O bule light Original data GEO bulk
80 ABA 1 h 0.15 >More info 0.50 >More info Mock 1 h Original data Basic hormone treatment of seedlings
81 Flowers stage15 0.50 >More info 0.14 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
82 embryo proper pre-globular -0.62 >More info -0.02 >More info whole seed sections pre-globular Original data GEO bulk
83 Cotyledons 0.50 >More info 0.13 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
84 Laer Flg22+GA 1h -0.58 >More info -0.05 >More info Laer Control leaf discs Original data GEO bulk
85 CCA1-ox 6am non-polysomal 0.11 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
86 short 12-degree- 0.50 >More info 0.11 >More info control short Original data GEO bulk
87 Distal half (leaf7) 0.50 >More info 0.10 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
88 Shoot submergence 7h -0.51 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
89 Laer pretreat GA Flg22 1h -0.21 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
90 peripheral endosperm pre-globular -0.58 >More info 0.08 >More info whole seed sections pre-globular Original data GEO bulk
91 pistil 0.5HAP 0.50 >More info -0.02 >More info unpollinated pistil pistil Original data GEO bulk
92 Seedling KUA1-IOX est 0.04 >More info -0.50 >More info Seedling KUA1-IOX mock Original data
93 Col BTH -0.22 >More info 0.67 >More info Col rosettes Original data GEO bulk
94 Mh0 UV 0.53 >More info -0.08 >More info Mh0 mock UV seedling Original data
95 Col0-PsmES4326-24hpi -0.17 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
96 sex1-3 0.17 >More info -0.53 >More info Col-WT leaves Original data GEO bulk
97 short 14-degree- 0.57 >More info -0.27 >More info control short Original data GEO bulk
98 Cs shoot -0.49 >More info 0.54 >More info control shoot Original data GEO bulk
99 siliques AtHb1 control -0.50 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk