4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on CHS-silenced type
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List of experiments correlated with "CHS-silenced type"  Help Download transcriptome of top 30
Score Experiment Correlation from
CHS-silenced type		 Correlation to
CHS-silenced type		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 CHS-silenced type 1.00 >More info 1.00 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
2 ddm1 mutant seedlings -0.51 >More info -0.82 >More info control seedlings 10-day old whole seedling Original data GEO bulk
3 ddm1 F6 inflorescence -0.59 >More info -0.66 >More info wt Col inflorescence unopened flower buds Original data
4 B.cinerea 18 h infection -0.44 >More info -0.81 >More info Mock 18 h Original data Botrytis cinerea infection
5 Botrytis cinerea 18h -0.44 >More info -0.81 >More info control 18h Original data GEO bulk
6 LTN008-2 aza-dc -0.65 >More info -0.56 >More info LTN012-2 Mock Original data
7 ddm1-2 -0.50 >More info -0.68 >More info Col-0 plant inflorescence Original data
8 Shoot -Cs -0.26 >More info -0.84 >More info Control-shoot Original data GEO bulk
9 WT powdery mildew -0.44 >More info -0.61 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
10 Got7 UV -0.60 >More info -0.42 >More info Got7 mock UV seedling Original data
11 IMI 4mM -0.38 >More info -0.64 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
12 R. solani AG2-1 -0.41 >More info -0.60 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
13 Botrytis cinerea 48h -0.41 >More info -0.59 >More info control 48h Original data GEO bulk
14 CLO 4mM -0.25 >More info -0.74 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
15 edr1 18 h powdery mildew -0.40 >More info -0.59 >More info Col-0 18 h powdery mildew Original data GEO bulk
16 K starvation (shoot) -0.43 >More info -0.55 >More info Ws (shoot) Original data GEO bulk
17 Shoot -K -0.43 >More info -0.55 >More info Control-shoot Original data GEO bulk
18 AsAKiin11 T2 -0.44 >More info -0.54 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
19 sdg2 -0.41 >More info -0.56 >More info wt seedling Original data GEO bulk
20 sid2-1 cold 0.32 >More info 0.65 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
21 eds16 whole leaf 7d UI 0.36 >More info 0.60 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
22 apk1 apk2 -0.36 >More info -0.60 >More info Col0-control whole rosette Original data GEO bulk
23 pmr4-1 control -0.36 >More info -0.59 >More info WT control uninoculated Original data GEO bulk
24 pmr5 pmr6 -0.33 >More info -0.62 >More info Col-0 Original data GEO bulk
25 pmr5 -0.23 >More info -0.72 >More info Col-0 Original data GEO bulk
26 edr1 0 h powdery mildew -0.39 >More info -0.55 >More info Col-0 0 h powdery mildew Original data GEO bulk
27 rcf1-1 cold 12h -0.37 >More info -0.57 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
28 S15-118 -0.31 >More info -0.63 >More info wt Original data GEO bulk
29 hog1-7 -0.56 >More info -0.37 >More info wt whole seedling Original data GEO bulk
30 mutant-line774 -0.56 >More info -0.37 >More info WT-control whole plant Original data GEO bulk
31 Mutant siz1-3 -0.40 >More info -0.53 >More info Col-0 Original data GEO bulk
32 Col whole leaf 7dpi -0.40 >More info -0.53 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
33 seed germinating in countinuous light 24h SL 0.26 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
34 Cor 24h -0.26 >More info -0.67 >More info Mock 24h Cor Original data GEO bulk
35 siz1-3 control -0.40 >More info -0.53 >More info Col-0 control Original data GEO bulk
36 downy mildew cotyledons late stage -0.29 >More info -0.64 >More info mock inoculated Cotyledons Original data GEO bulk
37 ddm1-2 rdr6-15 -0.43 >More info -0.50 >More info Col-0 plant inflorescence Original data
38 Prohexadione 12 h -0.36 >More info -0.56 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
39 CMV-A2b mutant -0.29 >More info -0.63 >More info Mock-At Aerial tissues Original data GEO bulk
40 Cor 10h -0.39 >More info -0.52 >More info Mock 10h Cor Original data GEO bulk
41 cat2-hCO2 0.32 >More info 0.59 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
42 Methyl Jasmonate 1 h -0.37 >More info -0.53 >More info Mock 1 h Original data Basic hormone treatment of seedlings
43 phyB mutant 22C 10hrs 0.25 >More info 0.65 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
44 Mutant sav3-2 (WL) -0.21 >More info -0.69 >More info Col-0 (WL) Original data GEO bulk
45 sav3-2 light -0.21 >More info -0.69 >More info Col-0 light seedlings Original data GEO bulk
46 Mature callus -0.33 >More info -0.56 >More info Young callus hypocotyls Original data GEO bulk
47 seedlings +5AC -0.51 >More info -0.38 >More info control seedlings 10-day old whole seedling Original data GEO bulk
48 mutant-line1135 -0.54 >More info -0.35 >More info WT-control whole plant Original data GEO bulk
49 ddm1-12 -0.54 >More info -0.35 >More info wt whole seedling Original data GEO bulk
50 DC3000 24h -0.20 >More info -0.69 >More info Mock 24h DC3000 Original data GEO bulk
51 upf1 -0.33 >More info -0.55 >More info WT whole plant Original data GEO bulk
52 Col-0 INA 48h -0.23 >More info -0.65 >More info Col-0 MOCK 48h Original data GEO bulk
53 PBZ -0.27 >More info -0.61 >More info none PBZ Rosette Original data GEO bulk
54 smg7b-1 -0.28 >More info -0.60 >More info WT whole plant Original data GEO bulk
55 Octopus overexpressor 35SDYG25 -0.31 >More info -0.56 >More info WS Original data GEO bulk
56 del1-1 mutant 5d uninfected -0.31 >More info -0.56 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
57 seedlings by volatiles from leafminer damaged
Lima bean 48h		 -0.30 >More info -0.57 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
58 Glyphosate EC50 -0.33 >More info -0.53 >More info Carrier (Glyphosate) Original data GEO bulk
59 seedling 24h after Gamma WT -0.30 >More info -0.56 >More info seedling day 2 unirradiated WT 24h Original data
60 lht1 untreated -0.24 >More info -0.62 >More info WT untreated untreated leaf Original data GEO bulk
61 ice1 6H Cold -0.36 >More info -0.50 >More info WT 6H Cold Original data GEO bulk
62 WT 2-4h Xanthomonas -0.36 >More info -0.50 >More info WT T0 Original data GEO bulk
63 cpr5npr1svi1 -0.19 >More info -0.66 >More info WT(COL) Original data GEO bulk
64 Col-0 9 hpi A. brassicicola -0.31 >More info -0.54 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
65 Col leaves 48h LT -0.32 >More info -0.53 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
66 FarRed Light 45min 0.09 >More info 0.76 >More info White Light 45min Original data Light treatments
67 elf3-7-16ºC -0.26 >More info -0.59 >More info WT-16ºC Original data GEO bulk
68 Elevated CO2 AMPLE N NIGHT -0.23 >More info -0.62 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
69 Col whole leaf amplified 5 dpi -0.29 >More info -0.55 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
70 Pto inoculated -0.30 >More info -0.54 >More info col Original data GEO bulk
71 HopZ1a treated -0.31 >More info -0.53 >More info col Original data GEO bulk
72 Col ozone 2d -0.28 >More info -0.56 >More info Col clean-air 2d ozone Original data GEO bulk
73 Mutant tga2_5_6 -0.31 >More info -0.52 >More info Col-0 Original data GEO bulk
74 plant (tga2-5-6) 4h control -0.31 >More info -0.52 >More info plant (Col-0) 4h control Original data GEO bulk
75 PAHs stress -0.20 >More info -0.63 >More info exp control phenanthrene whole plants Original data GEO bulk
76 CMV-WT -0.33 >More info -0.50 >More info Mock-At Aerial tissues Original data GEO bulk
77 S58-2 -0.30 >More info -0.53 >More info wt Original data GEO bulk
78 control leaf (cmt 5d) -0.24 >More info -0.59 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
79 seedling 24h after Gamma atm-1 -0.25 >More info -0.58 >More info seedling day 2 unirradiated atm-1 24h Original data
80 ceh1 mutant -0.20 >More info -0.62 >More info Parent line Original data
81 Shoot apex inflorescence (after bolting) 0.16 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
82 UV Stress 24 h (shoot) -0.25 >More info -0.56 >More info Stress mock 24 h (shoot) Original data Stress treatments
83 tmm1-inflorescence-tips -0.17 >More info -0.64 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
84 green tissue gl3 egl3 0.24 >More info 0.57 >More info green tissue WT L. er Original data GEO bulk
85 Pst-DC3000(avrRpm1)-4hpi -0.22 >More info -0.59 >More info Pst-DC3000-4hpi Original data GEO bulk
86 AtHDA6(rts1-1) rts1-5 0.29 >More info 0.51 >More info null-mutant whole plant Original data GEO bulk
87 COL-0-Fe--shoot -0.23 >More info -0.57 >More info COL-0-Ctrl--shoot shoot Original data
88 Wounding Stress3 h (shoot) -0.27 >More info -0.52 >More info Stress mock 3 h (shoot) Original data Stress treatments
89 Col whole leaf 5dpi -0.23 >More info -0.56 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
90 cpr5 -0.25 >More info -0.54 >More info WT seedling Original data GEO bulk
91 Elevated CO2 AMPLE N DAY -0.19 >More info -0.60 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
92 Mutant sav3-2 (SH) -0.10 >More info -0.69 >More info Col-0 (SH) Original data GEO bulk
93 SA 3h -0.09 >More info -0.70 >More info EtOH 3h 3hr Original data GEO bulk
94 sav3-2 shade -0.10 >More info -0.69 >More info Col-0 shade seedlings Original data GEO bulk
95 long 12-degree- -0.18 >More info -0.60 >More info control long Original data GEO bulk
96 cpr5 -0.15 >More info -0.63 >More info WT(COL) Original data GEO bulk
97 camta3-2 -0.09 >More info -0.69 >More info WT Original data GEO bulk
98 DC3000 2 h (leaf) -0.18 >More info -0.58 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
99 HopZ1a treated ulp1c ulp1d -0.24 >More info -0.52 >More info col Original data GEO bulk
100 Stem tissue 5 days NAA -0.19 >More info -0.57 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
101 12h volatiles Sm. R3089 0.26 >More info 0.50 >More info 12h untreated whole seedling Original data GEO bulk
102 amiR-tor induced 6d -0.08 >More info -0.68 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
103 rcf1-1 cold 24h -0.22 >More info -0.54 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
104 aba3-1 -0.26 >More info -0.50 >More info wt Original data GEO bulk
105 cop1 Seedling BL -0.13 >More info -0.62 >More info WT Seedling BL Original data GEO bulk
106 seedlings-week-old RECA1-overexpressing
transgenic		 -0.22 >More info -0.52 >More info seedlings-week-old Col-0 seedlings Original data
107 rsa3-1 Na 24h -0.05 >More info -0.68 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
108 Oxidative Stress 3 h (root) 0.19 >More info 0.54 >More info Stress mock 3 h (root) Original data Stress treatments
109 Mutant iaa17-6 -0.14 >More info -0.59 >More info Col Original data GEO bulk
110 long 17-degree- -0.13 >More info -0.60 >More info control long Original data GEO bulk
111 Mock pft1 leaf -0.06 >More info -0.67 >More info Mock Col-0 leaf water leaf Original data GEO bulk
112 lht1 PstDC3000 48h -0.18 >More info -0.55 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
113 bri1-116 -0.00 >More info 0.73 >More info Col seedling Original data GEO bulk
114 G3P -0.20 >More info -0.53 >More info Mock distal leaves Original data GEO bulk
115 shl-2 Pool 0.20 >More info 0.53 >More info Ler Pool seedling Original data GEO bulk
116 Col-0 DCA 48h -0.16 >More info -0.56 >More info Col-0 MOCK 48h Original data GEO bulk
117 cpr5scv1 -0.16 >More info -0.56 >More info WT(COL) Original data GEO bulk
118 OPDA 4 h -0.21 >More info -0.51 >More info Col-0 Original data GEO bulk
119 plant (Col-0) 4h OPDA -0.21 >More info -0.51 >More info plant (Col-0) 4h control Original data GEO bulk
120 det2 light-dark 0.16 >More info 0.55 >More info det2 light light-dark Original data GEO bulk
121 35S::HRE2 Aerobic 0.17 >More info 0.54 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
122 Mutant coi1(leaf) 0.19 >More info 0.52 >More info Col-0 (leaf) Original data GEO bulk
123 Heat shock optimum 0.06 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
124 gpa1-4/agb1-2 ozone 2d 0.10 >More info 0.61 >More info Col ozone 2d ozone Original data GEO bulk
125 P.syringae AvrRpt2 4 h (leaf) -0.14 >More info -0.56 >More info Mock 4 h (leaf) Original data Elicitor treatments
126 gun5 control -0.17 >More info -0.53 >More info Col-0 control Original data GEO bulk
127 pvip1 pvip2 -0.17 >More info -0.53 >More info Col-0 whole rosettes Original data GEO bulk
128 sni1 -0.15 >More info -0.55 >More info WT Original data GEO bulk
129 long 14-degree- -0.13 >More info -0.56 >More info control long Original data GEO bulk
130 Col whole leaf 6hpi -0.19 >More info -0.50 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
131 agb1 -ABA LF -0.18 >More info -0.51 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
132 35S::PI ap3-3 35S::AP-GR +DEX -0.10 >More info -0.58 >More info 0hr DEX Original data GEO bulk
133 WT-Dry -0.18 >More info -0.50 >More info WT-CK dehydration treatment 1h Original data
134 seedling 1.5h after Gamma atm-1 -0.11 >More info -0.57 >More info seedling day 1 unirradiated atm-1 1.5h Original data
135 Col-0-avrB-6h -0.16 >More info -0.51 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
136 camta1/3 warm -0.15 >More info -0.52 >More info WT warm entire aerial part Original data GEO bulk
137 albino Ds13-2198-1 0.17 >More info 0.50 >More info control Original data GEO bulk
138 ERF96OE -0.12 >More info -0.55 >More info WT leaf Original data
139 expressing C2 MeJA 0.12 >More info 0.54 >More info LUC2T Original data GEO bulk
140 JA 3h -0.04 >More info -0.61 >More info EtOH 3h 3hr Original data GEO bulk
141 dense canopy -0.14 >More info -0.51 >More info single (control) petiole Original data GEO bulk
142 root - 08% oxygen - 2h -0.12 >More info -0.52 >More info root - 21% oxygen - 2h Original data GEO bulk
143 Blue Light 4 h -0.10 >More info -0.53 >More info White Light 4 h Original data Light treatments
144 Whole root - low pH 48H -0.04 >More info -0.59 >More info Whole root - Std pH 48H pH 4.6 for 48 hr Original data GEO bulk
145 Cambium 5 days NAA -0.07 >More info -0.55 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
146 Col-0 mbs1-1 HL 3h 0.06 >More info 0.55 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
147 Laer Flg22(Agrobacterium) 2h 0.02 >More info 0.59 >More info Laer Control leaf discs Original data GEO bulk
148 IRP1-OE-Fe--shoot -0.04 >More info -0.56 >More info COL-0-Fe--shoot shoot Original data
149 Methyl Jasmonate 3 h -0.06 >More info -0.53 >More info Mock 3 h Original data Basic hormone treatment of seedlings
150 vte2-1 3d vernalization -0.05 >More info -0.53 >More info WT 3d vernalization Original data GEO bulk
151 wavy 0.01 >More info -0.59 >More info WT Original data GEO bulk
152 6h volatiles Sm. R3089 0.04 >More info 0.53 >More info 6h untreated whole seedling Original data GEO bulk
153 seedling -S Exp -0.05 >More info -0.51 >More info seedling FN Exp seedling Original data
154 Propiconazole 3 h -0.01 >More info -0.53 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
155 root - 04% oxygen - 2h 0.07 >More info -0.61 >More info root - 21% oxygen - 2h Original data GEO bulk
156 CCA1-ox 6am non-polysomal 0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
157 IAA7mII over-expressor IAA Treated -0.15 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
158 siliques AtHb1 control 0.00 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
159 Col BTH -0.15 >More info 0.67 >More info Col rosettes Original data GEO bulk
160 Red/FR Light45min 0.27 >More info -0.72 >More info FarRed Light 45min Original data Light treatments
161 Starch sheath 5 days MS incubation 0.09 >More info -0.53 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
162 rgs1+no sugars -0.07 >More info 0.51 >More info WT+no sugars rosette leaves Original data GEO bulk
163 shoot-10 μM DEX- 24hr 0.07 >More info -0.51 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
164 Leafminer damaged seedlings -0.14 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
165 Laer pretreat GA Flg22 1h -0.30 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
166 Ba1 UV 0.32 >More info -0.65 >More info Ba1 mock UV seedling Original data
167 Col0-PsmES4326-24hpi -0.28 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
168 Col-0 shade -0.19 >More info 0.51 >More info Col-0 light seedlings Original data GEO bulk
169 Light 3day hml 0.20 >More info -0.50 >More info 0h hml Original data