4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on hira-protoplast
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List of experiments correlated with "hira-protoplast"  Help Download transcriptome of top 30
Score Experiment Correlation from
hira-protoplast		 Correlation to
hira-protoplast		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 hira-protoplast 1.00 >More info 1.00 >More info WT-protoplast protoplast Original data
2 root epidermis and lateral root cap -S 0.52 >More info 0.67 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
3 root stele -S 0.58 >More info 0.60 >More info root stele pH5.7 Original data GEO bulk
4 Chemically 0.45 >More info 0.69 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
5 upb1-1 elongation zone -0.49 >More info -0.58 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
6 M6PR transgenic leaf 100mM NaCl -0.43 >More info -0.62 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
7 tga1 tga4 2h KCl -0.49 >More info -0.56 >More info Col 0 2h KCl 5 mM KCl root Original data GEO bulk
8 Heat shock optimum 0.38 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
9 red illumination +lincomycin 0.45 >More info 0.58 >More info red illumination -lincomycin Original data GEO bulk
10 21h-DC3000 hrpA 0.50 >More info 0.49 >More info 21h-DC3000 leaves Original data GEO bulk
11 low CO2 + light -0.51 >More info -0.47 >More info normal CO2 + light Original data GEO bulk
12 bri1-116 0.23 >More info 0.73 >More info Col seedling Original data GEO bulk
13 35S::RSL4 -0.53 >More info -0.42 >More info Col-0 Control root Original data GEO bulk
14 erf5 erf6 -0.41 >More info -0.54 >More info WT+water water seedlings Original data GEO bulk
15 WT (Col) glucose 0.45 >More info 0.50 >More info WT (Col) glucose seedlings Original data GEO bulk
16 hsfa2 KO 0.50 >More info 0.44 >More info WT (Col-0) whole seedling Original data GEO bulk
17 root cells epidermis 140mM NaCl 32 hours 0.54 >More info 0.39 >More info root cells epidermis standard 1 hour root cells epidermis Original data
18 2hr continuous KCl and MSX control PeR cell -0.39 >More info -0.53 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
19 Shoot apex inflorescence (after bolting) 0.26 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
20 21h-DC3000 avrRpm1 0.38 >More info 0.53 >More info 21h-DC3000 leaves Original data GEO bulk
21 abi1 hypocotyl 0.40 >More info 0.50 >More info Ler hypocotyl hypocotyl Original data GEO bulk
22 seed germinating in countinuous light 24h SL 0.22 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
23 SHR-GR Time 1H Dex -0.59 >More info -0.30 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
24 ahg2-1sid2-2 0.36 >More info 0.50 >More info WT (Col) control Original data GEO bulk
25 root cells epidermis 140mM NaCl 8 hours 0.53 >More info 0.32 >More info root cells epidermis standard 1 hour root cells epidermis Original data
26 Col-0 6h NAA 0.51 >More info 0.34 >More info Col-0 6h MOCK Original data GEO bulk
27 Inflorescences Trp1 0.35 >More info 0.50 >More info Inflorescences ler inflorescences Original data GEO bulk
28 estradiole-induced ANAC059 0.32 >More info 0.52 >More info transgenic (empty vector inducible system) Original data GEO bulk
29 root cells epidermis 140mM NaCl 48 hours 0.51 >More info 0.32 >More info root cells epidermis standard 1 hour root cells epidermis Original data
30 root - 08% oxygen - 2h -0.22 >More info -0.61 >More info root - 21% oxygen - 2h Original data GEO bulk
31 Mutant axr3-1 (IAA) 0.24 >More info 0.58 >More info Col (IAA) Original data GEO bulk
32 P35S:rGRF1 0.50 >More info 0.31 >More info Col-0 Original data GEO bulk
33 camta3-1 0.50 >More info 0.30 >More info WT Original data GEO bulk
34 NAA 6h 0.56 >More info 0.23 >More info before treatment NAA root Original data GEO bulk
35 root cells cortex 140mM NaCl 32 hours 0.53 >More info 0.26 >More info root cells cortex standard 1 hour root cells cortex Original data
36 line J2731-5 days control + 2 days salt s 0.24 >More info 0.55 >More info line J2731-7 days-control Original data
37 root - 04% oxygen - 2h -0.10 >More info -0.69 >More info root - 21% oxygen - 2h Original data GEO bulk
38 axr2 0.50 >More info 0.27 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
39 IAA 4h 0.51 >More info 0.26 >More info control 4h root Original data GEO bulk
40 Aerobic e1 ate2 -0.21 >More info -0.56 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
41 35S:ATR1 like miR 0.19 >More info 0.58 >More info WT for miR Original data GEO bulk
42 FLIGHT TAGESB plate6 ROOTS 0.14 >More info 0.63 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
43 WT Shoot Hypoxia -0.14 >More info -0.62 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
44 root hypoxia pGL2 0.22 >More info 0.53 >More info root hypoxia total hypoxia root Original data GEO bulk
45 shoot hypoxia total -0.18 >More info -0.55 >More info shoot control total Original data GEO bulk
46 siliques AtHb1 control 0.20 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
47 root cells endodermis 140mM NaCl 48 hours 0.50 >More info 0.21 >More info root cells endodermis standard 1 hour root cells endodermis Original data
48 root callus inducing medium 96 h 0.55 >More info 0.15 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
49 TNT-seedlings 0.04 >More info 0.65 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
50 Ovary 0.53 >More info 0.13 >More info Seedling Original data GEO bulk
51 UV Stress 24 h (root) -0.51 >More info -0.15 >More info Stress mock 24 h (root) Original data Stress treatments
52 Col BTH -0.01 >More info 0.67 >More info Col rosettes Original data GEO bulk
53 root callus inducing medium 48 h 0.54 >More info 0.11 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
54 0.2µM SMX 0.12 >More info 0.52 >More info control Whole seedling Original data GEO bulk
55 Indigo Carmine 0.5 uM -0.12 >More info -0.50 >More info Control MV and IC Indigo Carmine Original data
56 root cells endodermis 140mM NaCl 20 hours 0.51 >More info 0.10 >More info root cells endodermis standard 1 hour root cells endodermis Original data
57 IAA7mII over-expressor IAA Treated -0.08 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
58 Laer pretreat GA Flg22 1h -0.10 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
59 agb1 -ABA LF -0.09 >More info -0.51 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
60 Cs shoot -0.09 >More info -0.51 >More info control shoot Original data GEO bulk
61 sfr6 cold 0.03 >More info 0.55 >More info WT cold All aerial tissue Original data GEO bulk
62 xyl-grown cell culture- 1h 1mM Glc -0.05 >More info -0.51 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
63 phr1 Root-Pi -0.51 >More info -0.02 >More info WT Root+Pi roots Original data GEO bulk
64 CCA1-ox 6am non-polysomal 0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
65 root - 04% oxygen - 30min 0.06 >More info -0.56 >More info root - 21% oxygen - 30min Original data GEO bulk
66 35S:VND7-VP16-GR+CHX 0.13 >More info -0.62 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
67 root - 01% oxygen - 30min 0.18 >More info -0.59 >More info root - 21% oxygen - 30min Original data GEO bulk
68 t-zeatin 1 h 0.11 >More info -0.51 >More info Mock 1 h Original data Basic hormone treatment of seedlings
69 Leafminer damaged seedlings -0.19 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
70 Col0-PsmES4326-24hpi -0.31 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
71 seedling -S Exp -0.33 >More info 0.56 >More info seedling FN Exp seedling Original data