4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on mutant-line409
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "mutant-line409"  Help Download transcriptome of top 30
Score Experiment Correlation from
mutant-line409		 Correlation to
mutant-line409		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 mutant-line409 1.00 >More info 1.00 >More info WT-control whole plant Original data GEO bulk
2 mutant-line348 0.80 >More info 0.80 >More info WT-control whole plant Original data GEO bulk
3 root - 08% oxygen - 2h 0.36 >More info 0.81 >More info root - 21% oxygen - 2h Original data GEO bulk
4 Inflorescences Trp1 -0.52 >More info -0.53 >More info Inflorescences ler inflorescences Original data GEO bulk
5 AsAKiin11 T1 -0.36 >More info -0.69 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
6 6h volatiles Sp. HRO-C48 0.40 >More info 0.64 >More info 6h untreated whole seedling Original data GEO bulk
7 tt4 -0.39 >More info -0.64 >More info WT aerial region Original data GEO bulk
8 aox1a(line) untreated 0.56 >More info 0.45 >More info WT(Col0) untreated (control aox1a) leaf Original data
9 Full C2 T3 0.30 >More info 0.69 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
10 A. thaliana-A. lyrata hybrid 0.61 >More info 0.37 >More info A. thaliana mature leaves before flowering Original data GEO bulk
11 toc1-1-69hr -0.51 >More info -0.47 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
12 Apex mir-3TCP 14DAS -0.61 >More info -0.37 >More info Apex Col 14DAS Original data GEO bulk
13 35SPaWRKY1 -0.47 >More info -0.50 >More info Vector Seedlings including shoot and root Original data GEO bulk
14 WT Root Hypoxia 0.29 >More info 0.67 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
15 EBE-XVE +estradiol -0.44 >More info -0.51 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
16 miR 0h -0.52 >More info -0.41 >More info Col 0h Leaf Original data GEO bulk
17 3m.KNO3 0.50 >More info 0.43 >More info To. KNO3 14 day old Roots Original data GEO bulk
18 root - 01% oxygen - 2h 0.24 >More info 0.67 >More info root - 21% oxygen - 2h Original data GEO bulk
19 upf3 -0.54 >More info -0.36 >More info WT whole plant Original data GEO bulk
20 IAA7mII over-expressor IAA Treated 0.21 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
21 Split KNO3 roots - 8hours 0.57 >More info 0.32 >More info Split KCl roots - 8hours 5mM KNO3 on ONE side for 8 hours roots Original data GEO bulk
22 Rose Bengal 0.5 uM -0.52 >More info -0.35 >More info Control RB and PER Rose Bengal Original data
23 toc1-1-89hr -0.36 >More info -0.50 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
24 Atss3 Dark4 -0.53 >More info -0.32 >More info Atss3 Dark0.5 Original data GEO bulk
25 6m.KNO3 0.50 >More info 0.35 >More info To. KNO3 14 day old Roots Original data GEO bulk
26 arp6-10 12 ºC -0.55 >More info -0.29 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
27 A. lyrata 0.52 >More info 0.32 >More info A. thaliana mature leaves before flowering Original data GEO bulk
28 bri1-116 0.11 >More info 0.73 >More info Col seedling Original data GEO bulk
29 upf1 -0.53 >More info -0.30 >More info WT whole plant Original data GEO bulk
30 6m.KCl 0.51 >More info 0.32 >More info To. KCl 14 day old Roots Original data GEO bulk
31 Hydrogen Peroxide 500 uM -0.60 >More info -0.22 >More info Control RB and PER Hydrogen Peroxide Original data
32 root - 04% oxygen - 48h 0.15 >More info 0.66 >More info root - 21% oxygen - 48h Original data GEO bulk
33 mkk1 24h BTH rep 0.29 >More info 0.51 >More info Col-0 24h BTH rep Original data GEO bulk
34 WT Atum 1h -0.54 >More info -0.25 >More info WT 0h Leaf tissue Original data GEO bulk
35 sfr3 cold 0.50 >More info 0.29 >More info WT-cold aerial tissues Original data GEO bulk
36 Mutant sav3-2 (SH) -0.28 >More info -0.51 >More info Col-0 (SH) Original data GEO bulk
37 sav3-2 shade -0.28 >More info -0.51 >More info Col-0 shade seedlings Original data GEO bulk
38 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy		 0.58 >More info 0.20 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy		 2 h hypoxia +2' reoxy seedling Original data
39 Rsch 8h 0.51 >More info 0.27 >More info Rsch CA Leaves Original data
40 35S::ERF104 H2O 4h -0.53 >More info -0.24 >More info Col-0 H2O 4h Original data GEO bulk
41 toc1-1-85hr -0.24 >More info -0.53 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
42 35S:PCO1 hypoxia -0.24 >More info -0.53 >More info WT hypoxia whole rosette Original data
43 high-R:FR bud uppermost 0.53 >More info 0.23 >More info low-R:FR bud uppermost high R rosette axillary bud n Original data GEO bulk
44 rpoTmp(line) MLD stressed -0.55 >More info -0.20 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
45 Triazolopyrimidine EC50 -0.54 >More info -0.21 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
46 KCl germinant 0.53 >More info 0.21 >More info Millipore Water germinant KCl seedling Original data
47 12m.KCl 0.56 >More info 0.17 >More info To. KCl 14 day old Roots Original data GEO bulk
48 root cells epidermis 140mM NaCl 32 hours -0.59 >More info -0.14 >More info root cells epidermis standard 1 hour root cells epidermis Original data
49 GRX-overexpression seedlings IAA 0.13 >More info 0.60 >More info WT seedlings IAA Seedlings Original data GEO bulk
50 root cells epidermis 140mM NaCl 3 hours -0.55 >More info -0.17 >More info root cells epidermis standard 1 hour root cells epidermis Original data
51 triplod male excess -0.53 >More info -0.19 >More info tetraploid Original data GEO bulk
52 Rsch 1d 0.51 >More info 0.20 >More info Rsch CA Leaves Original data
53 A. thaliana-A. halleri hybrid 0.53 >More info 0.18 >More info A. thaliana mature leaves before flowering Original data GEO bulk
54 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark 0.50 >More info 0.20 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hMockDark 2 h mock dark seedling Original data
55 Laer pretreat GA Flg22 1h -0.01 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
56 cngc4 -0.53 >More info -0.16 >More info Ws-2 Seedlings Original data GEO bulk
57 Leafminer damaged seedlings 0.13 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
58 35SAvr -0.18 >More info -0.51 >More info Ecotype Col Original data GEO bulk
59 Apex mir-319b 17DAS -0.55 >More info -0.13 >More info Apex Col 14DAS Original data GEO bulk
60 root cells epidermis 140mM NaCl 48 hours -0.58 >More info -0.10 >More info root cells epidermis standard 1 hour root cells epidermis Original data
61 root - 08% oxygen - 30min -0.02 >More info 0.69 >More info root - 21% oxygen - 30min Original data GEO bulk
62 Col0-PsmES4326-24hpi 0.06 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
63 WT Shoot Hypoxia -0.00 >More info 0.66 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
64 Primisulfuron EC50 -0.50 >More info -0.15 >More info Carrier (primisulfuron) Original data GEO bulk
65 nd-1 mock 48 hpi -0.52 >More info -0.13 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
66 shoot hypoxia total 0.09 >More info 0.54 >More info shoot control total Original data GEO bulk
67 root - 04% oxygen - 2h -0.20 >More info 0.81 >More info root - 21% oxygen - 2h Original data GEO bulk
68 Col-0 24hpi A. brassicicola -0.62 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
69 root cells epidermis 140mM NaCl 8 hours -0.52 >More info -0.07 >More info root cells epidermis standard 1 hour root cells epidermis Original data
70 E2Fa-Dpa -0.53 >More info -0.06 >More info WT Original data GEO bulk
71 2h KNO3 Whole root -0.50 >More info -0.08 >More info 2h KCl control Whole root Whole root Original data GEO bulk
72 gai MeJA 1h -0.51 >More info -0.06 >More info Laer MeJA 1h leaf discs Original data GEO bulk
73 Aerobic e1 ate2 -0.06 >More info 0.63 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
74 P35S:rGRF3 0.53 >More info 0.02 >More info WS Original data GEO bulk
75 scrm-D:mute -0.57 >More info 0.02 >More info Col-0 WT whole seedling Original data GEO bulk
76 root - 08% oxygen - 48h -0.10 >More info 0.64 >More info root - 21% oxygen - 48h Original data GEO bulk
77 ARF10 0.51 >More info 0.02 >More info Col-0 Original data GEO bulk
78 GA4 3 h (ga1 seed) -0.59 >More info 0.06 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
79 WT (Col-0) inflorescence moderate drought day 3 -0.50 >More info -0.02 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
80 Heat shock optimum -0.13 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
81 cca1-lhy 30m light -0.02 >More info 0.51 >More info 30m light whole seedlings Original data GEO bulk
82 root - 01% oxygen - 30min -0.08 >More info 0.55 >More info root - 21% oxygen - 30min Original data GEO bulk
83 roots IAA -0.50 >More info 0.05 >More info roots mock Original data GEO bulk
84 Shoot apex inflorescence (after bolting) -0.20 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
85 seed germinating in countinuous light 24h SL -0.23 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
86 Blue Light 45 min 0.13 >More info -0.56 >More info White Light 45min Original data Light treatments
87 Col BTH -0.24 >More info 0.67 >More info Col rosettes Original data GEO bulk
88 IAA Treated -0.14 >More info 0.53 >More info Negative Control Original data GEO bulk
89 Aerobic prt6 -0.19 >More info 0.58 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
90 root - 04% oxygen - 30min -0.23 >More info 0.56 >More info root - 21% oxygen - 30min Original data GEO bulk
91 WT NAA 2h -0.30 >More info 0.58 >More info WT 0h Leaf tissue Original data GEO bulk
92 siliques AtHb1 control -0.27 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
93 -Sulfate 24 h 0.51 >More info -0.30 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
94 CCA1-ox 6am non-polysomal -0.31 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data