4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Col-O low light
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List of experiments correlated with "Col-O low light"  Help Download transcriptome of top 30
Score Experiment Correlation from
Col-O low light		 Correlation to
Col-O low light		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Col-O low light 1.00 >More info 1.00 >More info Col-O bule light Original data GEO bulk
2 col 24h4c set4 -0.76 >More info -0.81 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
3 WT cold -0.73 >More info -0.84 >More info WT control All aerial tissue Original data GEO bulk
4 short 12-degree- -0.75 >More info -0.81 >More info control short Original data GEO bulk
5 4C 24h -0.75 >More info -0.81 >More info 4C 0h Original data GEO bulk
6 short 17-degree- -0.68 >More info -0.86 >More info control short Original data GEO bulk
7 short 10-degree- -0.72 >More info -0.76 >More info control short Original data GEO bulk
8 short 14-degree- -0.74 >More info -0.73 >More info control short Original data GEO bulk
9 ws 24h4c q8ws -0.75 >More info -0.71 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
10 long 10-degree- -0.69 >More info -0.77 >More info control long Original data GEO bulk
11 long 8-degree- -0.70 >More info -0.75 >More info control long Original data GEO bulk
12 4C 24h(SOIL) -0.65 >More info -0.77 >More info 4C 0h(SOIL) Original data GEO bulk
13 WT cold 24h -0.67 >More info -0.75 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
14 camta1/2 warm 0.69 >More info 0.71 >More info WT 24h cold entire aerial part Original data GEO bulk
15 short 8-degree- -0.70 >More info -0.67 >More info control short Original data GEO bulk
16 WT 24h cold -0.67 >More info -0.69 >More info WT warm 24h cold entire aerial part Original data GEO bulk
17 WT cold 12 h -0.65 >More info -0.66 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
18 Col-0 WT HL 3h -0.63 >More info -0.65 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
19 long 12-degree- -0.63 >More info -0.62 >More info control long Original data GEO bulk
20 60m light -0.60 >More info -0.65 >More info before light whole seedlings Original data GEO bulk
21 seedling 24h after Gamma atm-1 -0.57 >More info -0.66 >More info seedling day 2 unirradiated atm-1 24h Original data
22 Cold Stress 24 h (shoot) -0.58 >More info -0.65 >More info Stress mock 24 h (shoot) Original data Stress treatments
23 WT 6H Cold -0.53 >More info -0.70 >More info WT control Original data GEO bulk
24 Col-0 low R/FR -0.56 >More info -0.66 >More info Col-0 high R/FR low R/FR seedlings Original data GEO bulk
25 long 14-degree- -0.57 >More info -0.65 >More info control long Original data GEO bulk
26 Col-0-1h IAA -0.59 >More info -0.62 >More info Col-0-0h IAA whole plant Original data GEO bulk
27 seedling 24h after Gamma WT -0.56 >More info -0.63 >More info seedling day 2 unirradiated WT 24h Original data
28 Transgenic LEC2GR Seedling 1h Dex -0.53 >More info -0.63 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
29 ape2 high light 0.54 >More info 0.61 >More info Ws-2 high light Original data GEO bulk
30 4C 7d -0.54 >More info -0.60 >More info 4C 0h Original data GEO bulk
31 4C 7d(SOIL) -0.50 >More info -0.63 >More info 4C 0h(SOIL) Original data GEO bulk
32 Cold Stress 24 h (root) -0.50 >More info -0.63 >More info Stress mock 24 h (root) Original data Stress treatments
33 35S::CBF2 -0.38 >More info -0.75 >More info Ws2 Original data GEO bulk
34 Wounding Stress3 h (shoot) -0.57 >More info -0.55 >More info Stress mock 3 h (shoot) Original data Stress treatments
35 30m light -0.47 >More info -0.65 >More info before light whole seedlings Original data GEO bulk
36 BI-1-1h IAA -0.55 >More info -0.54 >More info BI-1-0h IAA whole plant Original data GEO bulk
37 WT resupplied Pi 4h -0.57 >More info -0.52 >More info WT complete seedlings Original data
38 Col-O high light 0.58 >More info 0.50 >More info Col-O bule light Original data GEO bulk
39 WT 24H Cold -0.49 >More info -0.59 >More info WT control Original data GEO bulk
40 penta mutant (higher order mutant) 0.51 >More info 0.56 >More info col control (higher order mutant) Original data GEO bulk
41 low R/FR mock spray -0.42 >More info -0.65 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
42 Night Time Treatment -0.58 >More info -0.49 >More info Night Time Control 1hr white light pulse aerial rosette Original data
43 IAA Treated -0.41 >More info -0.65 >More info Negative Control Original data GEO bulk
44 Bur-0-1h IAA -0.50 >More info -0.55 >More info Bur-0h IAA whole plant Original data GEO bulk
45 GV3101 3hpi 0.47 >More info 0.57 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
46 ABA 1 h -0.34 >More info -0.69 >More info Mock 1 h Original data Basic hormone treatment of seedlings
47 FarRed Light 4 h -0.47 >More info -0.56 >More info White Light 4 h Original data Light treatments
48 estradiole-induced ANAC059 -0.38 >More info -0.65 >More info transgenic (empty vector inducible system) Original data GEO bulk
49 Fei-0-30min IAA -0.39 >More info -0.64 >More info Fei-0-0h IAA whole plant Original data GEO bulk
50 Fei-0-1h IAA -0.43 >More info -0.60 >More info Fei-0-0h IAA whole plant Original data GEO bulk
51 tcp14 0.33 >More info 0.70 >More info WT inflorescences Original data GEO bulk
52 Differentiation 12h -0.53 >More info -0.49 >More info Differentiation 0h leaves Original data
53 Whole root - S 3H -0.52 >More info -0.50 >More info Whole root - S 0H Original data GEO bulk
54 PNO8 12 h 0.31 >More info 0.70 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
55 Col BTH 0.34 >More info 0.67 >More info Col rosettes Original data GEO bulk
56 Red Light 4 h 0.27 >More info 0.73 >More info White Light 4 h Original data Light treatments
57 Blue Light 4 h -0.48 >More info -0.52 >More info White Light 4 h Original data Light treatments
58 Red/FR Light 4 h 0.44 >More info 0.55 >More info FarRed Light 4 h Original data Light treatments
59 Col-0-30min IAA -0.48 >More info -0.50 >More info Col-0-0h IAA whole plant Original data GEO bulk
60 root - 04% oxygen - 2h 0.23 >More info 0.74 >More info root - 21% oxygen - 2h Original data GEO bulk
61 sfr2 cold 0.55 >More info 0.41 >More info WT cold All aerial tissue Original data GEO bulk
62 Mutant sav3-2 (SH) 0.22 >More info 0.74 >More info Col-0 (SH) Original data GEO bulk
63 sav3-2 shade 0.22 >More info 0.74 >More info Col-0 shade seedlings Original data GEO bulk
64 Chemically -0.32 >More info -0.64 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
65 Heat no recovery -0.51 >More info -0.44 >More info Mock no recovery seedling Original data GEO bulk
66 Red/FR Light45min 0.25 >More info 0.70 >More info FarRed Light 45min Original data Light treatments
67 Heat shock optimum 0.30 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
68 whole roots 140 mM NaCl 4 hour -0.36 >More info -0.59 >More info whole roots standard Original data GEO bulk
69 IAA 3 h -0.33 >More info -0.61 >More info Mock 3 h Original data Basic hormone treatment of seedlings
70 L2.4 mutant -0.37 >More info -0.57 >More info Wt Original data GEO bulk
71 Total RNA csp1 cold -0.43 >More info -0.51 >More info Total RNA csp1 12h cold (4C) rosettes Original data GEO bulk
72 Col-0 +ABA GC -0.42 >More info -0.51 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
73 ape2 low light 0.50 >More info 0.42 >More info Ws-2 low light Original data GEO bulk
74 BI-1-3h IAA -0.51 >More info -0.40 >More info BI-1-0h IAA whole plant Original data GEO bulk
75 Leaf systemic -0.37 >More info -0.54 >More info Leaf control vegetative leaf Original data GEO bulk
76 CDB1-Knockout 0.38 >More info 0.53 >More info WT Original data GEO bulk
77 IAA 1 h -0.31 >More info -0.60 >More info Mock 1 h Original data Basic hormone treatment of seedlings
78 16C 4hs -0.33 >More info -0.58 >More info L22-4hrs whole plant excluding roots Original data GEO bulk
79 Mutant nph4-1 (IAA) 0.37 >More info 0.53 >More info Col (IAA) Original data GEO bulk
80 MYB51 OE 0.39 >More info 0.50 >More info WT for ATR1/MYB51 Original data GEO bulk
81 Col 1d -0.38 >More info -0.51 >More info Col CA Leaves Original data
82 WT (Col-0) inflorescence drought day 3 -0.50 >More info -0.38 >More info WT (Col-0) inflorescence well-watered day 3 Unopen flower buds Original data GEO bulk
83 Glyphosate EC50 -0.29 >More info -0.59 >More info Carrier (Glyphosate) Original data GEO bulk
84 ABA 3h -0.50 >More info -0.37 >More info EtOH 3h 3hr Original data GEO bulk
85 ANOXIA 0.34 >More info 0.52 >More info ANOXIA+SUCROSE Original data GEO bulk
86 gai Flg22 2h 0.50 >More info 0.36 >More info Laer Flg22 2h leaf discs Original data GEO bulk
87 Mutant cry1 (High Light) 0.53 >More info 0.32 >More info Col-0 (High Light) Original data GEO bulk
88 cry1 high light 0.53 >More info 0.32 >More info Col-O high light Original data GEO bulk
89 rosettes myoox drought -0.33 >More info -0.52 >More info rosettes myoox watered Original data GEO bulk
90 WT-Dry -0.35 >More info -0.50 >More info WT-CK dehydration treatment 1h Original data
91 naxillin 3h -0.53 >More info -0.31 >More info before treatment naxillin root Original data GEO bulk
92 Sha-1h IAA -0.34 >More info -0.50 >More info Sha-0h IAA whole plant Original data GEO bulk
93 C24-1h IAA -0.32 >More info -0.52 >More info C24-0h IAA whole plant Original data GEO bulk
94 IAA7mII over-expressor IAA Treated 0.12 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
95 empty vector IAA Treated -0.25 >More info -0.55 >More info empty vector mock Original data GEO bulk
96 xyl-grown cell culture- 1h 1mM Fru -0.30 >More info -0.50 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
97 low R/FR JA spray -0.27 >More info -0.52 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
98 polysome mRNA eif3k 0.07 >More info 0.71 >More info polysome mRNA WT aerial part Original data GEO bulk
99 root cortex pH4.6 -0.27 >More info -0.51 >More info root cortex pH5.7 Original data GEO bulk
100 elevated CO2 high Mg shoot 0.50 >More info 0.27 >More info atmospheric CO2 high Mg shoot Shoot Original data
101 IAA 0.5 h -0.16 >More info -0.61 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
102 GR-bdl DEX IAA 0.22 >More info 0.54 >More info GR-bdl IAA Original data GEO bulk
103 ptpks2 -0.13 >More info -0.63 >More info Col-WT leaves Original data GEO bulk
104 WT Shoot Hypoxia 0.21 >More info 0.55 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
105 Laer pretreat JA Flg22 0h -0.22 >More info -0.53 >More info Laer pretreat water control leaf discs Original data GEO bulk
106 Shoot apex inflorescence (after bolting) 0.09 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
107 35S:PCO1 hypoxia -0.18 >More info -0.56 >More info WT hypoxia whole rosette Original data
108 siliques AtHb1 control 0.21 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
109 bri1-116 -0.00 >More info 0.73 >More info Col seedling Original data GEO bulk
110 MPK6 ox Shoot Hypoxia 0.20 >More info 0.53 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
111 Col in Pi deficiency medium -0.16 >More info -0.56 >More info Col in control medium root Original data GEO bulk
112 6xX2x interploidy cross 0.21 >More info 0.51 >More info 2xX2x cross Original data GEO bulk
113 NaCl Col -0.12 >More info -0.59 >More info Col Original data GEO bulk
114 root - 08% oxygen - 2h 0.01 >More info 0.69 >More info root - 21% oxygen - 2h Original data GEO bulk
115 myb61 xylem -0.20 >More info -0.50 >More info wt xylem xylem Original data GEO bulk
116 seed germinating in countinuous light 24h SL 0.02 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
117 Laer pretreat GA Flg22 1h -0.04 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
118 ACN1-2 0.08 >More info 0.58 >More info col-7 Original data GEO bulk
119 WT Root Hypoxia 0.13 >More info 0.52 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
120 phyABCDE Rc50 -0.14 >More info -0.51 >More info phyABCDE Dark red light whole seedling Original data GEO bulk
121 NahG -0.14 >More info -0.51 >More info Col-0 Leaves Original data GEO bulk
122 Mutant sav3-2 (WL) 0.11 >More info 0.53 >More info Col-0 (WL) Original data GEO bulk
123 sav3-2 light 0.11 >More info 0.53 >More info Col-0 light seedlings Original data GEO bulk
124 Bay-0-1h IAA -0.12 >More info -0.51 >More info Bay-0-0h IAA whole plant Original data GEO bulk
125 MPK6 ox Root Hypoxia 0.11 >More info 0.52 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
126 gpa1 -ABA LF -0.06 >More info -0.54 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
127 Col-0 shade -0.08 >More info -0.52 >More info Col-0 light seedlings Original data GEO bulk
128 WT NAA 2h 0.09 >More info -0.67 >More info WT 0h Leaf tissue Original data GEO bulk
129 Mutant cry1 0.02 >More info -0.60 >More info Col-0 Original data GEO bulk
130 cry1 low light 0.02 >More info -0.60 >More info Col-O low light Original data GEO bulk
131 FarRed Light 45min 0.12 >More info -0.67 >More info White Light 45min Original data Light treatments
132 root - 08% oxygen - 30min -0.00 >More info 0.53 >More info root - 21% oxygen - 30min Original data GEO bulk
133 tt4 UV 0.02 >More info 0.51 >More info UV aerial region Original data GEO bulk
134 G3P 0.06 >More info -0.56 >More info Mock distal leaves Original data GEO bulk
135 root - 04% oxygen - 48h -0.07 >More info 0.56 >More info root - 21% oxygen - 48h Original data GEO bulk
136 Leafminer damaged seedlings -0.08 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
137 Col0-PsmES4326-24hpi -0.15 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
138 TNT-seedlings 0.11 >More info -0.57 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
139 CCA1-ox 6am non-polysomal -0.08 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
140 20m.KCl 0.11 >More info -0.52 >More info To. KCl 14 day old Roots Original data GEO bulk
141 rosette leaves bdg 0.11 >More info -0.51 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
142 toc1-1-73hr 0.50 >More info -0.13 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
143 Aerobic e1 ate2 -0.24 >More info 0.53 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk