4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on seedling 1.5h after Gamma WT
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List of experiments correlated with "seedling 1.5h after Gamma WT"  Help Download transcriptome of top 30
Score Experiment Correlation from
seedling 1.5h after Gamma WT		 Correlation to
seedling 1.5h after Gamma WT		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 seedling 1.5h after Gamma WT 1.00 >More info 1.00 >More info seedling day 1 unirradiated WT 1.5h Original data
2 seedling 3h after Gamma WT 0.91 >More info 0.91 >More info seedling day 1 unirradiated WT 3h Original data
3 seedling 24h after Gamma WT 0.75 >More info 0.82 >More info seedling day 2 unirradiated WT 24h Original data
4 seedling 24h after Gamma atm-1 0.74 >More info 0.82 >More info seedling day 2 unirradiated atm-1 24h Original data
5 seedling 6h after Gamma WT 0.83 >More info 0.72 >More info seedling day 1 unirradiated WT 6h Original data
6 atm3 -0.69 >More info -0.83 >More info Col0 whole plant Original data GEO bulk
7 seedling 1.5h after Gamma atm-1 0.74 >More info 0.77 >More info seedling day 1 unirradiated atm-1 1.5h Original data
8 seedling 24h after HZE WT 0.71 >More info 0.79 >More info seedling day 2 unirradiated WT 24h Original data
9 Genotoxic Stress 3 h (shoot) 0.64 >More info 0.83 >More info Stress mock 3 h (shoot) Original data Stress treatments
10 seedling 6h after HZE WT 0.79 >More info 0.59 >More info seedling day 1 unirradiated WT 6h Original data
11 irradiated leaf (cmt 1d) 0.70 >More info 0.60 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
12 seedling 12h after HZE WT 0.76 >More info 0.52 >More info seedling day 1 unirradiated WT 12h Original data
13 irradiated leaf (WT 1d) 0.65 >More info 0.61 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
14 Genotoxic Stress 3 h (root) 0.68 >More info 0.56 >More info Stress mock 3 h (root) Original data Stress treatments
15 csn3-1 dark 0.67 >More info 0.55 >More info WT dark Original data GEO bulk
16 Imidazolinone EC50 0.63 >More info 0.57 >More info Carrier (Imidazolinone) Original data GEO bulk
17 csn3-1 light 0.71 >More info 0.48 >More info WT light Original data GEO bulk
18 Primisulfuron EC50 0.62 >More info 0.56 >More info Carrier (primisulfuron) Original data GEO bulk
19 Triazolopyrimidine EC50 0.64 >More info 0.54 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
20 csn5 (csn5a-2 csn5b) light 0.72 >More info 0.46 >More info WT light Original data GEO bulk
21 seedling 24h after HZE atm-1 0.63 >More info 0.53 >More info seedling day 2 unirradiated atm-1 24h Original data
22 csn5 (csn5a-2 csn5b) dark 0.60 >More info 0.53 >More info WT dark Original data GEO bulk
23 seedling 12h after Gamma WT 0.77 >More info 0.36 >More info seedling day 1 unirradiated WT 12h Original data
24 5-Triiodobenzoic acid3 h 0.44 >More info 0.68 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
25 csn4-1 mutant 0.61 >More info 0.50 >More info WT dark Original data GEO bulk
26 BLM+INA 0.61 >More info 0.50 >More info CK BLM and INA seedling Original data
27 pil5 red light 0.57 >More info 0.52 >More info Col-0 red light Original data GEO bulk
28 Transgenic LEC2GR Seedling 1h Dex 0.47 >More info 0.62 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
29 ahg2-1sid2-2 0.52 >More info 0.56 >More info WT (Col) control Original data GEO bulk
30 inhibitor B Treated 0.44 >More info 0.64 >More info Negative Control Original data GEO bulk
31 UV 0.56 >More info 0.51 >More info WT aerial region Original data GEO bulk
32 seedlings +5AC 0.59 >More info 0.47 >More info control seedlings 10-day old whole seedling Original data GEO bulk
33 apum23 0.57 >More info 0.49 >More info WT (Col-3) aerial parts Original data GEO bulk
34 BLM 0.60 >More info 0.44 >More info CK BLM seedling Original data
35 csn4-1 dark 0.63 >More info 0.41 >More info WT light Original data GEO bulk
36 60m light 0.35 >More info 0.69 >More info before light whole seedlings Original data GEO bulk
37 24h volatiles Sm. R3089 -0.40 >More info -0.64 >More info 24h untreated whole seedling Original data GEO bulk
38 9 hr Hypoxia 1 hr recovery Total RNA 0.41 >More info 0.63 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
39 E2Fa-Dpa 0.65 >More info 0.38 >More info WT Original data GEO bulk
40 12h volatiles Sm. R3089 -0.42 >More info -0.61 >More info 12h untreated whole seedling Original data GEO bulk
41 Sulfometuron EC50 0.56 >More info 0.46 >More info Carrier Original data GEO bulk
42 sicy-192 cotyledons 0.61 >More info 0.40 >More info WT cotyledons cotyledons Original data
43 seedling 1.5h after HZE WT 0.67 >More info 0.34 >More info seedling day 1 unirradiated WT 1.5h Original data
44 MG132 3 h 0.39 >More info 0.62 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
45 plant (tga2-5-6) 4h phytoprostane A1 0.46 >More info 0.55 >More info plant (tga2-5-6) 4h control Original data GEO bulk
46 L2.4 mutant 0.48 >More info 0.53 >More info Wt Original data GEO bulk
47 cdpk6-yfp 0.45 >More info 0.56 >More info Kan seedlings Original data GEO bulk
48 WT cold 0.44 >More info 0.57 >More info WT control All aerial tissue Original data GEO bulk
49 35S::PI ap3-3 35S::AP-GR +DEX 0.44 >More info 0.57 >More info 0hr DEX Original data GEO bulk
50 WT seedlings MV 0.56 >More info 0.44 >More info WT seedlings control Seedlings Original data GEO bulk
51 Col-0 WT HL 3h 0.50 >More info 0.50 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
52 AgNO3 3 h 0.35 >More info 0.65 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
53 WT chitooctaose 0.47 >More info 0.52 >More info WT water Original data GEO bulk
54 AtLysM RLK1 mutant water 0.55 >More info 0.43 >More info WT water Original data GEO bulk
55 Leaf GLU1-KO 0.53 >More info 0.45 >More info Leaf Col(0) rosette leaves Original data GEO bulk
56 Mutant cry1 (High Light) -0.45 >More info -0.53 >More info Col-0 (High Light) Original data GEO bulk
57 toc1-1-85hr 0.32 >More info 0.66 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
58 cry1 high light -0.45 >More info -0.53 >More info Col-O high light Original data GEO bulk
59 shl-2 Pool -0.39 >More info -0.59 >More info Ler Pool seedling Original data GEO bulk
60 Tsu -Fe 24h Roots 0.52 >More info 0.45 >More info Tsu +Fe 24h Roots Original data GEO bulk
61 Tsu-1 -Fe 24h 0.52 >More info 0.45 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
62 (Col-0)+200 uM As 0.46 >More info 0.51 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
63 sta1 0.52 >More info 0.44 >More info WT Original data GEO bulk
64 seedling 6h after Gamma atm-1 0.62 >More info 0.34 >More info seedling day 1 unirradiated atm-1 6h Original data
65 TNT-seedlings 0.36 >More info 0.59 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
66 Phytoprostane A1 4 h 0.37 >More info 0.57 >More info Col-0 Original data GEO bulk
67 Col0-PsmES4326-24hpi 0.33 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
68 SA 0.37 >More info 0.57 >More info WT mock Whole seedling Original data GEO bulk
69 9 hr Hypoxia 1 hr recovery IP RNA 0.43 >More info 0.51 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
70 Cocultivation 8 hrs root 0.41 >More info 0.53 >More info Mock cocultivation 8 hrs root Root Original data
71 Norflurazon 0.51 >More info 0.42 >More info Col-0 Original data GEO bulk
72 Norflurazon 0.51 >More info 0.42 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
73 Whole root - S 3H 0.36 >More info 0.57 >More info Whole root - S 0H Original data GEO bulk
74 Total RNA 35S:HF-RPL18 0.42 >More info 0.51 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
75 Night Time Treatment 0.36 >More info 0.57 >More info Night Time Control 1hr white light pulse aerial rosette Original data
76 Heat no recovery 0.55 >More info 0.37 >More info Mock no recovery seedling Original data GEO bulk
77 30m light 0.34 >More info 0.58 >More info before light whole seedlings Original data GEO bulk
78 seedling 12h after Gamma atm-1 0.69 >More info 0.22 >More info seedling day 1 unirradiated atm-1 12h Original data
79 WT mitomycin C 0.61 >More info 0.30 >More info WT mock shoot apical meristem Original data
80 Col-0 DEX Shade -0.41 >More info -0.50 >More info Col-0 DEX WL seedlings Original data
81 toc1-1-57hr 0.41 >More info 0.50 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
82 short 12-degree- 0.26 >More info 0.64 >More info control short Original data GEO bulk
83 penta mutant (higher order mutant) -0.35 >More info -0.55 >More info col control (higher order mutant) Original data GEO bulk
84 Laer pretreat GA Flg22 1h 0.19 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
85 WT 3h -P 0.32 >More info 0.58 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
86 FarRed Light 4 h 0.25 >More info 0.64 >More info White Light 4 h Original data Light treatments
87 Red/FR Light 4 h -0.29 >More info -0.60 >More info FarRed Light 4 h Original data Light treatments
88 root - 01% oxygen - 48h 0.34 >More info 0.54 >More info root - 21% oxygen - 48h Original data GEO bulk
89 Rose Bengal 0.5 uM 0.32 >More info 0.55 >More info Control RB and PER Rose Bengal Original data
90 LTN008-2 aza-dc 0.54 >More info 0.32 >More info LTN012-2 Mock Original data
91 Col-0 wt Hypoxic 0.34 >More info 0.52 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
92 Selenate (root) 0.34 >More info 0.51 >More info Ws (root) Original data GEO bulk
93 R. solani AG8 0.32 >More info 0.53 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
94 Root Selenate 0.34 >More info 0.51 >More info Root control 40 micromolar selenate Root Original data GEO bulk
95 Day Time Treatment 0.30 >More info 0.54 >More info Day Time Control 1hr white light pulse aerial rosette Original data
96 sid2 -0.52 >More info -0.31 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
97 TaFLS overexpression line (OE2) -0.33 >More info -0.50 >More info Col-0 Rosette leaves Original data
98 Blue Light 4 h 0.21 >More info 0.62 >More info White Light 4 h Original data Light treatments
99 inhibitor A Treated 0.23 >More info 0.60 >More info Negative Control Original data GEO bulk
100 Kas -Fe 48h Shoots 0.50 >More info 0.32 >More info Kas +Fe 24h Shoots Original data GEO bulk
101 seedling 6h after HZE atm-1 0.53 >More info 0.29 >More info seedling day 1 unirradiated atm-1 6h Original data
102 Whole root - S 24H 0.30 >More info 0.52 >More info Whole root - S 0H Original data GEO bulk
103 6h volatiles Sm. R3089 -0.21 >More info -0.61 >More info 6h untreated whole seedling Original data GEO bulk
104 ANOXIA -0.28 >More info -0.53 >More info ANOXIA+SUCROSE Original data GEO bulk
105 NJ15 0.26 >More info 0.55 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
106 toc1-1-53hr 0.24 >More info 0.56 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
107 G3P 0.28 >More info 0.52 >More info Mock distal leaves Original data GEO bulk
108 COL-0-Fe--shoot 0.57 >More info 0.23 >More info COL-0-Ctrl--shoot shoot Original data
109 FarRed Light 45min -0.11 >More info -0.69 >More info White Light 45min Original data Light treatments
110 pil5 dark 0.59 >More info 0.20 >More info Col-0 dark Original data GEO bulk
111 0.125 mM gold 24 h 0.25 >More info 0.54 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
112 root Dosed gold 0.25 >More info 0.54 >More info root No gold .125 mM gold 24 h roots Original data
113 anac017-2 water 3h 0.22 >More info 0.57 >More info WT water 3h 3h_water Original data GEO bulk
114 Whole root - S 12H 0.27 >More info 0.51 >More info Whole root - S 0H Original data GEO bulk
115 cat2-2; 8h switch to ambient CO2 concentrations; 0.25 >More info 0.51 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
116 bbx24 in Simulated Shade -0.26 >More info -0.50 >More info WT in simulated shade shade seedling Original data
117 plant (Col-0) 4h phytoprostane A1 0.23 >More info 0.52 >More info plant (tga2-5-6) 4h control Original data GEO bulk
118 Red Light 4 h -0.21 >More info -0.53 >More info White Light 4 h Original data Light treatments
119 CsUBC13-OE -Fe -0.09 >More info -0.65 >More info Col -Fe root Original data GEO bulk
120 oas-a1.1 Cd 24h 0.20 >More info 0.54 >More info Cd 24h root Shoot Original data GEO bulk
121 seed germinating in countinuous light 24h SL 0.07 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
122 IAA/inhibitor B Treated 0.11 >More info 0.62 >More info IAA Treated Original data GEO bulk
123 bri1-116 -0.01 >More info 0.73 >More info Col seedling Original data GEO bulk
124 short 17-degree- 0.20 >More info 0.50 >More info control short Original data GEO bulk
125 seedling 3h after HZE WT 0.67 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
126 oligomycin 1 h 0.13 >More info 0.56 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
127 35S:RPS4 eds1-2 2h -0.17 >More info -0.52 >More info 35S:RPS4 2h leaves Original data
128 Shoot apex inflorescence (after bolting) 0.02 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
129 long 17-degree- 0.10 >More info 0.56 >More info control long Original data GEO bulk
130 Col BTH -0.02 >More info 0.67 >More info Col rosettes Original data GEO bulk
131 ice1 3H Cold 0.50 >More info 0.14 >More info WT 3H Cold Original data GEO bulk
132 seedling 12h after HZE atm-1 0.58 >More info 0.05 >More info seedling day 1 unirradiated atm-1 12h Original data
133 amiR-tor induced 6d 0.52 >More info 0.10 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
134 Leafminer damaged seedlings 0.05 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
135 Tsu -Fe 24h Shoots 0.50 >More info 0.11 >More info Tsu +Fe 24h Shoots Original data GEO bulk
136 Heat shock optimum -0.04 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
137 ice1 6H Cold 0.50 >More info 0.07 >More info WT 6H Cold Original data GEO bulk
138 Mutant clv3-7(shoot apex) 0.51 >More info 0.06 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
139 siliques AtHb1 control 0.05 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
140 IAA7mII over-expressor IAA Treated -0.12 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
141 -Sulfate 24 h 0.04 >More info 0.50 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
142 rgs1+no sugars -0.03 >More info -0.50 >More info WT+no sugars rosette leaves Original data GEO bulk
143 Red/FR Light45min -0.00 >More info 0.52 >More info FarRed Light 45min Original data Light treatments
144 CCA1-ox 6am non-polysomal -0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
145 Blue Light 45 min 0.07 >More info -0.50 >More info White Light 45min Original data Light treatments
146 E.orontii Infection 6 h -0.18 >More info 0.55 >More info Uninfection 6 h Original data Elicitor treatments