4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on pnp1-1 3h -P
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "pnp1-1 3h -P"  Help Download transcriptome of top 30
Score Experiment Correlation from
pnp1-1 3h -P		 Correlation to
pnp1-1 3h -P		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 pnp1-1 3h -P 1.00 >More info 1.00 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
2 pnp1-1 3h +P 0.92 >More info 0.91 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
3 pnp1-1 1wk +P 0.78 >More info 0.75 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
4 ASL9-ox -0.75 >More info -0.69 >More info WT aerial parts of seedlings Original data GEO bulk
5 pnp1-1 1wk -P 0.75 >More info 0.67 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
6 shoots bhlh100/101 0uM Fe 0.71 >More info 0.63 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
7 mkk1/mkk2 24h BTH rep 0.65 >More info 0.66 >More info Col-0 24h BTH rep Original data GEO bulk
8 24h light (+Lincomycin) 0.60 >More info 0.68 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
9 HopZ1a treated ulp1c ulp1d 0.59 >More info 0.69 >More info col Original data GEO bulk
10 Col-0 norflurazon 0.64 >More info 0.61 >More info Col-0 control Original data GEO bulk
11 Pto inoculated 0.57 >More info 0.65 >More info col Original data GEO bulk
12 sta1 0.53 >More info 0.68 >More info WT Original data GEO bulk
13 Norflurazon 0.51 >More info 0.68 >More info Col-0 Original data GEO bulk
14 NahG 0.52 >More info 0.67 >More info Col-0 Leaves Original data GEO bulk
15 Norflurazon 0.51 >More info 0.68 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
16 ceh1 mutant 0.67 >More info 0.51 >More info Parent line Original data
17 Botrytis cinerea 48h 0.60 >More info 0.58 >More info control 48h Original data GEO bulk
18 ice1 6H Cold 0.53 >More info 0.62 >More info WT 6H Cold Original data GEO bulk
19 ADD3 -0.59 >More info -0.55 >More info WT aerial part Original data GEO bulk
20 35S-MIF1 light grown 0.61 >More info 0.53 >More info Light-grown WT control Original data GEO bulk
21 HopZ1a treated 0.52 >More info 0.61 >More info col Original data GEO bulk
22 treated group 0.51 >More info 0.61 >More info Control group Original data
23 IMI 4mM 0.56 >More info 0.55 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
24 PBZ 0.54 >More info 0.57 >More info none PBZ Rosette Original data GEO bulk
25 ice1 24H Cold 0.53 >More info 0.57 >More info WT 24H Cold Original data GEO bulk
26 ARR22-ox 0.62 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
27 SPT4-R3 seedlings0 DAS 0.57 >More info 0.53 >More info Col-0 seedlings0 DAS seedlings Original data
28 ABA JA 24h 0.32 >More info 0.77 >More info EtOH 24h 24hr Original data GEO bulk
29 sicy-192 cotyledons 0.43 >More info 0.66 >More info WT cotyledons cotyledons Original data
30 DC3000 2 h (leaf) 0.46 >More info 0.62 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
31 albino Ds13-2198-1 -0.55 >More info -0.52 >More info control Original data GEO bulk
32 Leaf GLU1-KO 0.54 >More info 0.53 >More info Leaf Col(0) rosette leaves Original data GEO bulk
33 noa1-2 0.55 >More info 0.52 >More info Col-0 whole seedlings Original data GEO bulk
34 dor drought 0.30 >More info 0.77 >More info WT drought Original data GEO bulk
35 rpl24 total 0.57 >More info 0.50 >More info WT total seedling shoot/aerial seedling Original data
36 shoots WT 0uM Fe 0.58 >More info 0.49 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
37 gh3.5-1D 48 hpi 0.50 >More info 0.57 >More info Col-0 uninoculated Original data GEO bulk
38 nia1nia2noa1-2 0.58 >More info 0.49 >More info Col-0 whole seedlings Original data GEO bulk
39 ice1 3H Cold 0.56 >More info 0.50 >More info WT 3H Cold Original data GEO bulk
40 mkk1/mkk2 control rep 0.54 >More info 0.52 >More info Col-0 Time 0 rep Original data GEO bulk
41 Col-0 drought 0.54 >More info 0.52 >More info Col-0 control Original data GEO bulk
42 Col0-PsmES4326-24hpi 0.45 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
43 SLWF infested 0.49 >More info 0.57 >More info SLWF uninfested rosette tissue Original data GEO bulk
44 aox1a(line) MLD stressed 0.52 >More info 0.53 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
45 msh1 albino 0.57 >More info 0.47 >More info WT aerial part Original data GEO bulk
46 gun5 norflurazon 0.57 >More info 0.47 >More info gun5 control Original data GEO bulk
47 ARR21C-ox 0.64 >More info 0.40 >More info Col-0 Original data ARR21C overexpression
48 B.cinerea 18 h infection 0.50 >More info 0.54 >More info Mock 18 h Original data Botrytis cinerea infection
49 Botrytis cinerea 18h 0.50 >More info 0.54 >More info control 18h Original data GEO bulk
50 JA 3h 0.31 >More info 0.73 >More info EtOH 3h 3hr Original data GEO bulk
51 ERF96OE 0.41 >More info 0.63 >More info WT leaf Original data
52 ice1 control 0.52 >More info 0.51 >More info WT control Original data GEO bulk
53 clf-28 swn-7 0.57 >More info 0.46 >More info Col whole plant Original data GEO bulk
54 low water potential 0.63 >More info 0.40 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
55 Aerobic prt6 0.47 >More info 0.56 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
56 Elevated CO2 LIMITING N DAY -0.44 >More info -0.59 >More info Elevated CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
57 Col-0 C2H4 24h 0.46 >More info 0.56 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
58 cngc1-3 0.35 >More info 0.67 >More info Col-0 root Original data GEO bulk
59 Stem tissue 5 days NAA 0.40 >More info 0.62 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
60 DC3000 24h 0.43 >More info 0.59 >More info Mock 24h DC3000 Original data GEO bulk
61 nia1nia2 0.51 >More info 0.50 >More info Col-0 whole seedlings Original data GEO bulk
62 Leafminer damaged seedlings 0.45 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
63 aerial organ callus inducing medium 96 h 0.45 >More info 0.55 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
64 DC3000 7h 0.52 >More info 0.47 >More info Mock 7h DC3000 Original data GEO bulk
65 essp4/sdg8-5 mutant 0.57 >More info 0.42 >More info wild type leaf Original data GEO bulk
66 phr1 phl1 Root-Pi 0.52 >More info 0.47 >More info WT Shoot+Pi roots Original data GEO bulk
67 rosette leaves bdg 0.40 >More info 0.59 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
68 ulp1c ulp1d +Pto 0.47 >More info 0.52 >More info ulp1c ulp1d mock Original data GEO bulk
69 Stem tissue 2 days NAA 0.38 >More info 0.61 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
70 hrpA 7h 0.43 >More info 0.56 >More info Mock 7h hrpA Original data GEO bulk
71 Sulfometuron EC50 0.42 >More info 0.57 >More info Carrier Original data GEO bulk
72 RPL18 TuMV inoculated total RNA 0.52 >More info 0.46 >More info mock inoculated total RNA PO Original data GEO bulk
73 JMJ24 knockout 0.58 >More info 0.40 >More info WT Original data GEO bulk
74 wt systemic wounding 0.46 >More info 0.52 >More info wt control leaves Original data GEO bulk
75 aphid saliva treated 0.47 >More info 0.51 >More info control aphid saliva treated leaves Original data GEO bulk
76 Myzus persicae saliva 0.47 >More info 0.51 >More info Control Original data GEO bulk
77 Nicotinamide-93hr 0.54 >More info 0.43 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
78 spch 0.58 >More info 0.39 >More info Col-0 WT whole seedling Original data GEO bulk
79 rpl24 polysome 0.51 >More info 0.46 >More info WT polysome seedling shoot/aerial seedling Original data
80 Laer MeJA 1h -0.50 >More info -0.47 >More info Laer Control leaf discs Original data GEO bulk
81 rosettes drought 0.46 >More info 0.51 >More info rosettes watered Original data GEO bulk
82 Col-0-avrB-6h 0.36 >More info 0.61 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
83 8h-DC3000 avrRpm1 0.39 >More info 0.58 >More info 8h-DC3000 leaves Original data GEO bulk
84 apum23 0.38 >More info 0.59 >More info WT (Col-3) aerial parts Original data GEO bulk
85 Mature callus 0.47 >More info 0.50 >More info Young callus hypocotyls Original data GEO bulk
86 mil4 BTH 0.47 >More info 0.50 >More info Col BTH rosettes Original data GEO bulk
87 Nicotinamide-53hr 0.40 >More info 0.56 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
88 RPL18 TuMV inoculated polysomal RNA 0.54 >More info 0.42 >More info mock inoculated polysomal RNA PO Original data GEO bulk
89 Leafminer locally damaged thaliana seedlings 0.45 >More info 0.51 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
90 msh1 recA3 heat shock 0.30 >More info 0.65 >More info WT heat shock above-ground parts Original data GEO bulk
91 Homozygous-AtcesA6 0.44 >More info 0.51 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
92 Shoot submergence 24h 0.43 >More info 0.52 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
93 Differentiation 12h 0.50 >More info 0.44 >More info Differentiation 0h leaves Original data
94 hrcC 0.42 >More info 0.52 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
95 Shoot -Cs 0.42 >More info 0.52 >More info Control-shoot Original data GEO bulk
96 Col-0 under 4 days salt 0.44 >More info 0.50 >More info Col-0 under control 4 days salt treatment rosette Original data
97 Mutant gh3.5-1D (AvrRpt2) 0.37 >More info 0.56 >More info Col-0 (AvrRpt2) Original data GEO bulk
98 Nicotinamide-73hr 0.40 >More info 0.53 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
99 cat2-hCO2 -0.39 >More info -0.54 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
100 myb3 myb3r4d 0.38 >More info 0.55 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
101 gpa1-4/agb1-2 ozone 2d -0.39 >More info -0.54 >More info Col ozone 2d ozone Original data GEO bulk
102 Col-0 +lincomycin 0.26 >More info 0.66 >More info Col-0 -lincomycin Original data GEO bulk
103 Col BTH 0.25 >More info 0.67 >More info Col rosettes Original data GEO bulk
104 csn3-1 light 0.50 >More info 0.42 >More info WT light Original data GEO bulk
105 msh1 recA3 untreated 0.35 >More info 0.57 >More info WT untreated above-ground parts Original data GEO bulk
106 penta Alternaria 3dpi 0.51 >More info 0.40 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
107 rosette leaves fdh 0.29 >More info 0.62 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
108 IRP1-OE-Fe--shoot 0.33 >More info 0.56 >More info COL-0-Fe--shoot shoot Original data
109 pXVE:HA-EDM2-a untreated 0.29 >More info 0.60 >More info Col-0 untreated seedlings Original data GEO bulk
110 gun1-9 norflurazon 0.56 >More info 0.31 >More info gun1-9 control Original data GEO bulk
111 sdg8-2 mutant 0.52 >More info 0.35 >More info wild type leaf Original data GEO bulk
112 CLO 4mM 0.36 >More info 0.51 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
113 des1.1 0.29 >More info 0.58 >More info Leaves-WT leaf Original data GEO bulk
114 FOX line K19624 0.33 >More info 0.53 >More info empty vector control (T3) FOX lines Original data GEO bulk
115 Laer pretreat GA Flg22 1h 0.15 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
116 Shoot dark control 24h 0.36 >More info 0.50 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
117 hsfa1 quadruple mutant 0.54 >More info 0.31 >More info WT (Col-0) whole seedling Original data GEO bulk
118 wnk8-1 untreated 0.34 >More info 0.51 >More info Col-0 untreated seedlings Original data GEO bulk
119 nar1-4/- 0.32 >More info 0.53 >More info WT whole seedling Original data GEO bulk
120 Blue Light 4 h 0.28 >More info 0.57 >More info White Light 4 h Original data Light treatments
121 FAMA induced 4h -0.16 >More info -0.69 >More info control 4h Whole seedling Original data GEO bulk
122 FarRed Light 4 h 0.34 >More info 0.50 >More info White Light 4 h Original data Light treatments
123 ABA SA 24h 0.31 >More info 0.53 >More info EtOH 24h 24hr Original data GEO bulk
124 PstDC3000 48h -0.24 >More info -0.60 >More info WT untreated 48hr leaf Original data GEO bulk
125 rosettes myoox drought 0.29 >More info 0.54 >More info rosettes myoox watered Original data GEO bulk
126 Laer Alternaria 3dpi -0.31 >More info -0.52 >More info Laer Control leaf discs Original data GEO bulk
127 sfr2 control -0.58 >More info -0.25 >More info WT control All aerial tissue Original data GEO bulk
128 scrm-D 0.50 >More info 0.31 >More info Col-0 WT whole seedling Original data GEO bulk
129 Cambium 5 days NAA 0.29 >More info 0.52 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
130 Heat shock optimum 0.16 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
131 sid2-2 9 hpi A. brassicicola 0.31 >More info 0.50 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
132 Starch sheath 5 days MS incubation 0.27 >More info 0.53 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
133 tt4 0.27 >More info 0.53 >More info Col-0 aerial part Original data
134 JA 24h 0.28 >More info 0.51 >More info EtOH 24h 24hr Original data GEO bulk
135 seed germinating in countinuous light 24h SL 0.12 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
136 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.51 >More info -0.25 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
137 rosette Dark Wounded 0.22 >More info 0.54 >More info rosette Dark Control Original data GEO bulk
138 siliques AtHb1 control 0.24 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
139 Col-0 DCA 6d 0.23 >More info 0.52 >More info Col-0 MOCK 6d Original data GEO bulk
140 RGA-GR-DEX 0.22 >More info 0.51 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
141 seedling 3h after Gamma WT 0.16 >More info 0.55 >More info seedling day 1 unirradiated WT 3h Original data
142 Uniconazole 12 h 0.15 >More info 0.55 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
143 Paclobutrazol 3 h 0.12 >More info 0.58 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
144 cop1 Seedling BL+ABA 0.20 >More info 0.50 >More info WT Seedling BL+ABA Original data GEO bulk
145 Col leaf scrape 5 dpi 0.54 >More info 0.15 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
146 Mock pft1 leaf 0.12 >More info 0.56 >More info Mock Col-0 leaf water leaf Original data GEO bulk
147 sex1-3 0.10 >More info 0.55 >More info Col-WT leaves Original data GEO bulk
148 Propiconazole 3 h 0.06 >More info 0.56 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
149 bio4-1 mutant leaves 0.10 >More info 0.51 >More info WT leaves leaves Original data GEO bulk
150 Full C2 T3 -0.00 >More info -0.61 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
151 IAA7mII over-expressor IAA Treated -0.09 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
152 Cd 24h root -0.06 >More info -0.53 >More info WT-Untreated Shoot Original data GEO bulk
153 2xX4x interploidy cross 0.06 >More info 0.53 >More info 2xX2x cross Original data GEO bulk
154 bri1-116 -0.15 >More info 0.73 >More info Col seedling Original data GEO bulk
155 pvip1 pvip2 seedling 0.59 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
156 Shoot apex inflorescence (after bolting) -0.09 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
157 root - 04% oxygen - 2h 0.04 >More info 0.52 >More info root - 21% oxygen - 2h Original data GEO bulk
158 upb1-1 meristematic zone -0.04 >More info -0.51 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
159 2hr transitory KNO3 ECR cell -0.00 >More info 0.55 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
160 root - 08% oxygen - 2h -0.00 >More info 0.53 >More info root - 21% oxygen - 2h Original data GEO bulk
161 desiccated mature pollen grains -0.07 >More info 0.59 >More info hydrated pollen grains Original data GEO bulk
162 CCA1-ox 6am non-polysomal 0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
163 root - 08% oxygen - 30min -0.07 >More info 0.56 >More info root - 21% oxygen - 30min Original data GEO bulk
164 Dark 2day ivd 0.50 >More info -0.01 >More info 0h ivd Original data
165 2hr continuous KNO3 ECR cell -0.14 >More info 0.51 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
166 P. infestans 6 h (leaf) 0.51 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments