4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on WT cold 12 h
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List of experiments correlated with "WT cold 12 h"  Help Download transcriptome of top 30
Score Experiment Correlation from
WT cold 12 h		 Correlation to
WT cold 12 h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 WT cold 12 h 1.00 >More info 1.00 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
2 WT cold 24h 0.87 >More info 0.90 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
3 WT 24H Cold 0.84 >More info 0.85 >More info WT control Original data GEO bulk
4 Cold Stress 24 h (shoot) 0.84 >More info 0.84 >More info Stress mock 24 h (shoot) Original data Stress treatments
5 4C 24h 0.81 >More info 0.84 >More info 4C 0h Original data GEO bulk
6 4C 24h(SOIL) 0.78 >More info 0.85 >More info 4C 0h(SOIL) Original data GEO bulk
7 col 24h4c set4 0.82 >More info 0.81 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
8 WT 6H Cold 0.79 >More info 0.81 >More info WT control Original data GEO bulk
9 short 10-degree- 0.77 >More info 0.82 >More info control short Original data GEO bulk
10 short 8-degree- 0.76 >More info 0.82 >More info control short Original data GEO bulk
11 WT cold 0.77 >More info 0.80 >More info WT control All aerial tissue Original data GEO bulk
12 4C 7d(SOIL) 0.74 >More info 0.81 >More info 4C 0h(SOIL) Original data GEO bulk
13 WT 24h cold 0.76 >More info 0.79 >More info WT warm 24h cold entire aerial part Original data GEO bulk
14 Cold Stress 24 h (root) 0.76 >More info 0.79 >More info Stress mock 24 h (root) Original data Stress treatments
15 short 12-degree- 0.75 >More info 0.77 >More info control short Original data GEO bulk
16 camta1/2 warm -0.73 >More info -0.77 >More info WT 24h cold entire aerial part Original data GEO bulk
17 ws 24h4c q8ws 0.76 >More info 0.70 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
18 Laer Flg22(Agrobacterium) 2h 0.66 >More info 0.77 >More info Laer Control leaf discs Original data GEO bulk
19 short 17-degree- 0.63 >More info 0.80 >More info control short Original data GEO bulk
20 4C 7d 0.72 >More info 0.71 >More info 4C 0h Original data GEO bulk
21 08h Col-0 0.69 >More info 0.70 >More info 00h Col-0 Original data GEO bulk
22 seedling 12h after Gamma atm-1 0.70 >More info 0.66 >More info seedling day 1 unirradiated atm-1 12h Original data
23 seedling 6h after HZE atm-1 0.67 >More info 0.67 >More info seedling day 1 unirradiated atm-1 6h Original data
24 20h Col-0 0.63 >More info 0.71 >More info 00h Col-0 Original data GEO bulk
25 spx1 spx2 complete 0.75 >More info 0.58 >More info WT complete seedlings Original data
26 CBF3 100mM NaCl 0.74 >More info 0.59 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
27 short 14-degree- 0.67 >More info 0.66 >More info control short Original data GEO bulk
28 seedling 12h after Gamma WT 0.68 >More info 0.64 >More info seedling day 1 unirradiated WT 12h Original data
29 16h Col-0 0.65 >More info 0.67 >More info 00h Col-0 Original data GEO bulk
30 toc1-1-77hr 0.58 >More info 0.74 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
31 WT resupplied Pi 4h 0.72 >More info 0.60 >More info WT complete seedlings Original data
32 long 8-degree- 0.61 >More info 0.70 >More info control long Original data GEO bulk
33 Col-O low light -0.66 >More info -0.65 >More info Col-O bule light Original data GEO bulk
34 35S::CBF2 0.56 >More info 0.74 >More info Ws2 Original data GEO bulk
35 npr1-3 MOCK 48h -0.48 >More info -0.80 >More info Col-0 MOCK 48h Original data GEO bulk
36 WT cold 0.67 >More info 0.59 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
37 Col leaves 48h LT 0.64 >More info 0.60 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
38 12h Col-0 0.66 >More info 0.58 >More info 00h Col-0 Original data GEO bulk
39 Col-0 WT HL 3h 0.63 >More info 0.60 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
40 Mutant cry1 (High Light) -0.63 >More info -0.60 >More info Col-0 (High Light) Original data GEO bulk
41 seedling 12h after HZE atm-1 0.62 >More info 0.61 >More info seedling day 1 unirradiated atm-1 12h Original data
42 cry1 high light -0.63 >More info -0.60 >More info Col-O high light Original data GEO bulk
43 seedling 6h after HZE WT 0.66 >More info 0.56 >More info seedling day 1 unirradiated WT 6h Original data
44 Total RNA csp1 cold 0.61 >More info 0.61 >More info Total RNA csp1 12h cold (4C) rosettes Original data GEO bulk
45 Glyphosate EC50 0.63 >More info 0.58 >More info Carrier (Glyphosate) Original data GEO bulk
46 oas-a1.1 Cd 24h 0.56 >More info 0.64 >More info Cd 24h root Shoot Original data GEO bulk
47 WT +Pep2 10h 0.70 >More info 0.50 >More info WT untreated Pep2 Original data GEO bulk
48 Col 1d 0.62 >More info 0.58 >More info Col CA Leaves Original data
49 ein2-1 24hpi A. brassicicola -0.58 >More info -0.62 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
50 dde2-2 24hpi A. brassicicola -0.59 >More info -0.59 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
51 seedling 6h after Gamma atm-1 0.56 >More info 0.60 >More info seedling day 1 unirradiated atm-1 6h Original data
52 seedling 12h after HZE WT 0.61 >More info 0.55 >More info seedling day 1 unirradiated WT 12h Original data
53 CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1 cold 0.55 >More info 0.61 >More info CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1 12h cold (4C) rosettes Original data GEO bulk
54 WT 3H Cold 0.50 >More info 0.65 >More info WT control Original data GEO bulk
55 long 10-degree- 0.54 >More info 0.61 >More info control long Original data GEO bulk
56 toc1-1-53hr 0.60 >More info 0.55 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
57 WT +elf18 10h 0.68 >More info 0.46 >More info WT untreated elf18 Original data GEO bulk
58 PRR5-VP 6h light on 0.67 >More info 0.47 >More info WT 6h light on whole plant Original data GEO bulk
59 Transgenic LEC2GR Seedling 1h Dex 0.51 >More info 0.62 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
60 Leafminer damaged seedlings 0.57 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
61 Col 8h 0.53 >More info 0.58 >More info Col CA Leaves Original data
62 CBF3 0mM NaCl 0.64 >More info 0.46 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
63 Leafminer locally damaged thaliana seedlings 0.57 >More info 0.53 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
64 Leaf GLU1-KO 0.66 >More info 0.44 >More info Leaf Col(0) rosette leaves Original data GEO bulk
65 4C 0h 0.55 >More info 0.54 >More info 22C 0h Original data GEO bulk
66 Laer pretreat GA Flg22 1h 0.38 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
67 Atss3 Dark8 -0.59 >More info -0.49 >More info Atss3 Dark0.5 Original data GEO bulk
68 4C 1h 0.35 >More info 0.73 >More info 4C 0h Original data GEO bulk
69 Col 3d 0.59 >More info 0.48 >More info Col CA Leaves Original data
70 Imidazolinone EC50 0.59 >More info 0.47 >More info Carrier (Imidazolinone) Original data GEO bulk
71 pip3 At2g19270 RNAi 24 -0.55 >More info -0.51 >More info Nd-1 whole plant Original data GEO bulk
72 toc1-1-57hr 0.51 >More info 0.55 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
73 long 17-degree- 0.28 >More info 0.77 >More info control long Original data GEO bulk
74 sfr6 cold 0.43 >More info 0.62 >More info WT cold All aerial tissue Original data GEO bulk
75 Nicotinamide-49hr 0.53 >More info 0.51 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
76 35S::PI ap3-3 35S::AP-GR +DEX 0.53 >More info 0.50 >More info 0hr DEX Original data GEO bulk
77 WT no Pi 0.61 >More info 0.42 >More info WT complete seedlings Original data
78 Salt Stress 24 h (shoot) 0.58 >More info 0.44 >More info Stress mock 24 h (shoot) Original data Stress treatments
79 OsRLCK253 expressing -0.57 >More info -0.45 >More info WT seedlings Original data GEO bulk
80 CSP1 immonoprecipitated RNA 35S:HF-RPL18 cold 0.53 >More info 0.48 >More info CSP1 immonoprecipitated RNA 35S:HF-RPL18 12h cold (4C) rosettes Original data GEO bulk
81 sicy-192 gun1-101 cotyledons 0.50 >More info 0.51 >More info WT cotyledons cotyledons Original data
82 wt systemic wounding 0.44 >More info 0.57 >More info wt control leaves Original data GEO bulk
83 Col-0-3h IAA 0.60 >More info 0.40 >More info Col-0-0h IAA whole plant Original data GEO bulk
84 root endodermis and quiescent center 40 mM NaCl 0.47 >More info 0.53 >More info root endodermis and quiescent center Original data GEO bulk
85 Osmotic Stress 24 h (shoot) 0.54 >More info 0.45 >More info Stress mock 24 h (shoot) Original data Stress treatments
86 Bur-0-3h IAA 0.57 >More info 0.42 >More info Bur-0h IAA whole plant Original data GEO bulk
87 apum23 0.54 >More info 0.44 >More info WT (Col-3) aerial parts Original data GEO bulk
88 Heat shock optimum 0.33 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
89 WT Na2S -0.46 >More info -0.52 >More info WT water Na2S leaf Original data GEO bulk
90 pip3 At2g19270 RNAi 32 -0.53 >More info -0.44 >More info Nd-1 whole plant Original data GEO bulk
91 gun5 control -0.56 >More info -0.41 >More info Col-0 control Original data GEO bulk
92 ced1 -0.53 >More info -0.44 >More info WT PEG 6hr seedlings Original data GEO bulk
93 Col0-PsmES4326-24hpi 0.36 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
94 Col leaves 120h LT 0.46 >More info 0.51 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
95 WT (Col-0) inflorescence moderate drought day 3 0.56 >More info 0.40 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
96 ms1 unpollinated -0.58 >More info -0.38 >More info WT 8h-pollinated pistil Original data GEO bulk
97 sid2-2 24hpi A. brassicicola -0.55 >More info -0.41 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
98 Sulfometuron EC50 0.55 >More info 0.41 >More info Carrier Original data GEO bulk
99 long 12-degree- 0.45 >More info 0.51 >More info control long Original data GEO bulk
100 cca1-lhy 60m light 0.42 >More info 0.54 >More info 60m light whole seedlings Original data GEO bulk
101 Atss3 Light1 -0.53 >More info -0.42 >More info Atss3 Dark0.5 Original data GEO bulk
102 BI-1-3h IAA 0.58 >More info 0.37 >More info BI-1-0h IAA whole plant Original data GEO bulk
103 rosettes WT drought 0.53 >More info 0.42 >More info rosettes WT watered Original data GEO bulk
104 35S:VND7-VP16-GR+CHX 0.41 >More info 0.54 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
105 rosettes drought 0.54 >More info 0.40 >More info rosettes watered Original data GEO bulk
106 myb61 xylem 0.43 >More info 0.51 >More info wt xylem xylem Original data GEO bulk
107 aerial organ callus inducing medium 12 h 0.56 >More info 0.37 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
108 SOS1 0mM NaCl 0.55 >More info 0.38 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
109 9 hr Hypoxia 1 hr recovery IP RNA 0.53 >More info 0.39 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
110 downy mildew cotyledons late stage -0.38 >More info -0.54 >More info mock inoculated Cotyledons Original data GEO bulk
111 SPT4-R3 seedlings0 DAS 0.58 >More info 0.33 >More info Col-0 seedlings0 DAS seedlings Original data
112 WT (Col-0) inflorescence moderate drought day 4 0.50 >More info 0.40 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
113 gun1-9 control -0.39 >More info -0.51 >More info Col-0 control Original data GEO bulk
114 gh3.5-1D 48 hpi 0.55 >More info 0.34 >More info Col-0 uninoculated Original data GEO bulk
115 Primisulfuron EC50 0.50 >More info 0.39 >More info Carrier (primisulfuron) Original data GEO bulk
116 T8 leaf-drought 0.53 >More info 0.36 >More info T8 leaf-well watered Original data GEO bulk
117 estradiole-induced ANAC059 0.39 >More info 0.50 >More info transgenic (empty vector inducible system) Original data GEO bulk
118 root - 08% oxygen - 2h -0.29 >More info -0.59 >More info root - 21% oxygen - 2h Original data GEO bulk
119 9 hr Hypoxia 1 hr recovery Total RNA 0.51 >More info 0.36 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
120 Cor hrpS 10h 0.35 >More info 0.52 >More info Mock 10h Cor hrpS Original data GEO bulk
121 dor drought 0.54 >More info 0.32 >More info WT drought Original data GEO bulk
122 WT leaf-drought 0.50 >More info 0.36 >More info WT leaf-well watered Original data GEO bulk
123 Dark 6h ivd 0.53 >More info 0.32 >More info 0h ivd Original data
124 Cd 18h root -0.30 >More info -0.55 >More info WT-Untreated Root Original data GEO bulk
125 Blue Light 4 h 0.28 >More info 0.57 >More info White Light 4 h Original data Light treatments
126 rosette Dark Wounded 0.28 >More info 0.57 >More info rosette Dark Control Original data GEO bulk
127 npr1 sni1 ssn2 SA 0.50 >More info 0.33 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
128 sdg2 0.55 >More info 0.28 >More info wt seedling Original data GEO bulk
129 Dark 6h wt 0.52 >More info 0.31 >More info 0h wt Original data
130 Cor 10h 0.33 >More info 0.50 >More info Mock 10h Cor Original data GEO bulk
131 root - 04% oxygen - 2h -0.14 >More info -0.69 >More info root - 21% oxygen - 2h Original data GEO bulk
132 Compost 0.50 >More info 0.32 >More info Perlite Compost Original data GEO bulk
133 proline 0.51 >More info 0.31 >More info noneHS Original data GEO bulk
134 SOS1 100mM NaCl 0.58 >More info 0.23 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
135 FarRed Light 4 h 0.23 >More info 0.58 >More info White Light 4 h Original data Light treatments
136 camta1 leaf drought -0.50 >More info -0.30 >More info Col-0 leaf drought leaf Original data GEO bulk
137 Dark 6h hml 0.52 >More info 0.28 >More info 0h hml Original data
138 Col-0-avrB-6h 0.28 >More info 0.52 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
139 AZC 0.58 >More info 0.22 >More info noneHS Original data GEO bulk
140 T6 leaf-drought 0.51 >More info 0.28 >More info T6 leaf-well watered Original data GEO bulk
141 hyl1 0.57 >More info 0.22 >More info Col-0 Original data GEO bulk
142 arp6-10 24h at 27 ºC 0.59 >More info 0.19 >More info Col-0 24h at 27 ºC whole seedlings Original data GEO bulk
143 nas4x leaves - Fe -0.53 >More info -0.25 >More info WT leaves - Fe Leaves Original data GEO bulk
144 Laer pretreat JA Flg22 0h 0.24 >More info 0.54 >More info Laer pretreat water control leaf discs Original data GEO bulk
145 NaCl Col 0.28 >More info 0.50 >More info Col Original data GEO bulk
146 AgNO3 3 h 0.23 >More info 0.54 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
147 bri1-116 0.04 >More info 0.73 >More info Col seedling Original data GEO bulk
148 D2O 0.51 >More info 0.25 >More info H2O seedling Original data GEO bulk
149 Laer MeJA 1h 0.53 >More info 0.23 >More info Laer Control leaf discs Original data GEO bulk
150 Laer pretreat GA Flg22 2h 0.50 >More info 0.24 >More info Laer pretreat water control leaf discs Original data GEO bulk
151 hst5 0.58 >More info 0.15 >More info Col-0 Original data GEO bulk
152 wrky72-2-NOCO2 INFECTED 0.50 >More info 0.23 >More info WT-NOCO2 INFECTED Original data GEO bulk
153 Red/FR Light 4 h -0.21 >More info -0.51 >More info FarRed Light 4 h Original data Light treatments
154 eif3h 0.51 >More info 0.20 >More info WT Original data GEO bulk
155 Red/FR Light45min 0.04 >More info -0.70 >More info FarRed Light 45min Original data Light treatments
156 dor control -0.54 >More info -0.11 >More info WT control Original data GEO bulk
157 hsfa2 KO 0.57 >More info 0.08 >More info WT (Col-0) whole seedling Original data GEO bulk
158 pad4-est1b-1-doublemutant 0.58 >More info 0.07 >More info pad4-mutant developed rosette leaves Original data GEO bulk
159 WT leaves - Fe -0.53 >More info -0.11 >More info WT leaves + Fe Leaves Original data GEO bulk
160 Red Light 45min -0.06 >More info -0.55 >More info White Light 45min Original data Light treatments
161 Col BTH -0.06 >More info 0.67 >More info Col rosettes Original data GEO bulk
162 RGA-GR-DEX 0.01 >More info 0.60 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
163 del1-1 5dpi 0.10 >More info 0.51 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
164 nas4x leaves + Fe -0.50 >More info -0.09 >More info WT leaves + Fe Leaves Original data GEO bulk
165 tt4 UV 0.11 >More info -0.69 >More info UV aerial region Original data GEO bulk
166 hsfa2 KO heat shock 0.50 >More info 0.07 >More info WT (Col-0) heat shock whole seedling Original data GEO bulk
167 CCA1-ox 6am non-polysomal 0.05 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
168 IAA7mII over-expressor IAA Treated -0.13 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
169 siliques AtHb1 control -0.00 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
170 Shoot apex inflorescence (after bolting) -0.19 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
171 seed germinating in countinuous light 24h SL -0.23 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
172 myb3 myb3r4d -0.12 >More info 0.54 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
173 TNT-seedlings -0.14 >More info 0.53 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
174 Aerobic e1 ate2 0.20 >More info -0.50 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk