WT cold 24h

4.0:Analysis result - correlation network

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Module-based correlation network(MCN) centered on WT cold 24h

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List of experiments correlated with "WT cold 24h"

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Score	Experiment	Correlation from WT cold 24h	Correlation to WT cold 24h	Control Experiment	Treatment	Tissue	Link to original data	Experimental Category
1	WT cold 24h	1.00 >More info	1.00 >More info	WT cold 0h	cold at 4°C	seedlings	Original data	GEO bulk
2	WT cold 12 h	0.90 >More info	0.87 >More info	WT cold 0h	GSM955987	seedlings	Original data	GEO bulk
3	4C 24h	0.83 >More info	0.83 >More info	4C 0h			Original data	GEO bulk
4	col 24h4c set4	0.82 >More info	0.78 >More info	col 0h4c	cold-treated moved to a 4C chamber for 24h	whole seedlings	Original data
5	4C 24h(SOIL)	0.79 >More info	0.79 >More info	4C 0h(SOIL)			Original data	GEO bulk
6	4C 7d(SOIL)	0.77 >More info	0.79 >More info	4C 0h(SOIL)			Original data	GEO bulk
7	Cold Stress 24 h (shoot)	0.81 >More info	0.75 >More info	Stress mock 24 h (shoot)			Original data	Stress treatments
8	WT 24H Cold	0.80 >More info	0.75 >More info	WT control			Original data	GEO bulk
9	WT 24h cold	0.80 >More info	0.74 >More info	WT warm	24h cold	entire aerial part	Original data	GEO bulk
10	short 12-degree-	0.75 >More info	0.78 >More info	control short			Original data	GEO bulk
11	WT cold	0.81 >More info	0.72 >More info	WT control		All aerial tissue	Original data	GEO bulk
12	4C 7d	0.77 >More info	0.73 >More info	4C 0h			Original data	GEO bulk
13	short 8-degree-	0.71 >More info	0.79 >More info	control short			Original data	GEO bulk
14	Cold Stress 24 h (root)	0.76 >More info	0.72 >More info	Stress mock 24 h (root)			Original data	Stress treatments
15	short 10-degree-	0.71 >More info	0.76 >More info	control short			Original data	GEO bulk
16	camta1/2 warm	-0.78 >More info	-0.69 >More info	WT 24h cold		entire aerial part	Original data	GEO bulk
17	WT 6H Cold	0.77 >More info	0.70 >More info	WT control			Original data	GEO bulk
18	ws 24h4c q8ws	0.79 >More info	0.67 >More info	col 0h4c	cold-treated moved to a 4C chamber for 24h	whole seedlings	Original data
19	WT cold	0.74 >More info	0.70 >More info	WT warm	3 week cold	entire aerial part	Original data	GEO bulk
20	short 17-degree-	0.60 >More info	0.84 >More info	control short			Original data	GEO bulk
21	Col-O low light	-0.75 >More info	-0.67 >More info	Col-O bule light			Original data	GEO bulk
22	Col leaves 48h LT	0.71 >More info	0.68 >More info	Col leaves 0h LT	48h	9-11th adult leaves	Original data
23	long 8-degree-	0.65 >More info	0.72 >More info	control long			Original data	GEO bulk
24	Laer Flg22(Agrobacterium) 2h	0.69 >More info	0.66 >More info	Laer Control		leaf discs	Original data	GEO bulk
25	Col leaves 120h LT	0.68 >More info	0.63 >More info	Col leaves 0h LT	12h	9-11th adult leaves	Original data
26	short 14-degree-	0.64 >More info	0.66 >More info	control short			Original data	GEO bulk
27	WT resupplied Pi 4h	0.78 >More info	0.51 >More info	WT complete		seedlings	Original data
28	PRR5-VP 6h light on	0.74 >More info	0.53 >More info	WT 6h light on		whole plant	Original data	GEO bulk
29	seedling 12h after Gamma WT	0.71 >More info	0.55 >More info	seedling day 1 unirradiated WT	12h		Original data
30	Col-0 WT HL 3h	0.69 >More info	0.55 >More info	Col-0 WT HL 0h	HL stress (1 µE m−2 s−1)	whole seedlings without root	Original data
31	spx1 spx2 complete	0.74 >More info	0.49 >More info	WT complete		seedlings	Original data
32	long 10-degree-	0.56 >More info	0.66 >More info	control long			Original data	GEO bulk
33	npr1-3 MOCK 48h	-0.53 >More info	-0.69 >More info	Col-0 MOCK 48h			Original data	GEO bulk
34	toc1-1-57hr	0.60 >More info	0.61 >More info	WT-untreated-57hr	none	seedlings aerial tissue	Original data	GEO bulk
35	Transgenic LEC2GR Seedling 1h Dex	0.53 >More info	0.66 >More info	Transgenic LEC2GR Seedling 0h Dex			Original data	GEO bulk
36	toc1-1-53hr	0.55 >More info	0.64 >More info	WT-untreated-53hr	none	seedlings aerial tissue	Original data	GEO bulk
37	seedling 12h after Gamma atm-1	0.70 >More info	0.48 >More info	seedling day 1 unirradiated atm-1	12h		Original data
38	WT +Pep2 10h	0.70 >More info	0.48 >More info	WT untreated	Pep2		Original data	GEO bulk
39	4C 0h	0.67 >More info	0.50 >More info	22C 0h			Original data	GEO bulk
40	toc1-1-77hr	0.49 >More info	0.68 >More info	WT-untreated-77hr	none	seedlings aerial tissue	Original data	GEO bulk
41	Imidazolinone EC50	0.62 >More info	0.54 >More info	Carrier (Imidazolinone)			Original data	GEO bulk
42	Glyphosate EC50	0.66 >More info	0.50 >More info	Carrier (Glyphosate)			Original data	GEO bulk
43	Total RNA csp1 cold	0.56 >More info	0.59 >More info	Total RNA csp1	12h cold (4C)	rosettes	Original data	GEO bulk
44	20h Col-0	0.61 >More info	0.54 >More info	00h Col-0			Original data	GEO bulk
45	Bur-0-3h IAA	0.70 >More info	0.45 >More info	Bur-0h IAA		whole plant	Original data	GEO bulk
46	Mutant cry1 (High Light)	-0.61 >More info	-0.52 >More info	Col-0 (High Light)			Original data	GEO bulk
47	CSP1 immonoprecipitated RNA 35S:HF-RPL18 cold	0.54 >More info	0.59 >More info	CSP1 immonoprecipitated RNA 35S:HF-RPL18	12h cold (4C)	rosettes	Original data	GEO bulk
48	16h Col-0	0.63 >More info	0.50 >More info	00h Col-0			Original data	GEO bulk
49	cry1 high light	-0.61 >More info	-0.52 >More info	Col-O high light			Original data	GEO bulk
50	Laer pretreat GA Flg22 1h	0.40 >More info	0.71 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
51	long 17-degree-	0.33 >More info	0.77 >More info	control long			Original data	GEO bulk
52	ein2-1 24hpi A. brassicicola	-0.56 >More info	-0.53 >More info	Col-0 9 hpi A. brassicicola		3rd-5th true leaves	Original data
53	CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1 cold	0.54 >More info	0.55 >More info	CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1	12h cold (4C)	rosettes	Original data	GEO bulk
54	root - 08% oxygen - 2h	-0.41 >More info	-0.68 >More info	root - 21% oxygen - 2h			Original data	GEO bulk
55	oas-a1.1 Cd 24h	0.57 >More info	0.52 >More info	Cd 24h root		Shoot	Original data	GEO bulk
56	seedling 6h after HZE atm-1	0.61 >More info	0.48 >More info	seedling day 1 unirradiated atm-1	6h		Original data
57	Col 1d	0.57 >More info	0.51 >More info	Col CA		Leaves	Original data
58	WT +elf18 10h	0.65 >More info	0.42 >More info	WT untreated	elf18		Original data	GEO bulk
59	sicy-192 gun1-101 cotyledons	0.55 >More info	0.52 >More info	WT cotyledons		cotyledons	Original data
60	Nicotinamide-49hr	0.49 >More info	0.58 >More info	WT-untreated-49hr	nicotinamide	aerial tissue	Original data	GEO bulk
61	12h Col-0	0.61 >More info	0.45 >More info	00h Col-0			Original data	GEO bulk
62	08h Col-0	0.61 >More info	0.45 >More info	00h Col-0			Original data	GEO bulk
63	4C 6h	0.62 >More info	0.43 >More info	22C 3h			Original data	GEO bulk
64	35S::CBF2	0.49 >More info	0.56 >More info	Ws2			Original data	GEO bulk
65	seedling 6h after HZE WT	0.64 >More info	0.40 >More info	seedling day 1 unirradiated WT	6h		Original data
66	Leaf GLU1-KO	0.62 >More info	0.42 >More info	Leaf Col(0)		rosette leaves	Original data	GEO bulk
67	Blue Light 4 h	0.46 >More info	0.58 >More info	White Light 4 h			Original data	Light treatments
68	long 12-degree-	0.48 >More info	0.56 >More info	control long			Original data	GEO bulk
69	estradiole-induced ANAC059	0.44 >More info	0.60 >More info	transgenic (empty vector inducible system)			Original data	GEO bulk
70	csn4-1 dark	0.59 >More info	0.44 >More info	WT light			Original data	GEO bulk
71	AZC	0.65 >More info	0.37 >More info	noneHS			Original data	GEO bulk
72	Col 3d	0.57 >More info	0.45 >More info	Col CA		Leaves	Original data
73	seedling 12h after HZE atm-1	0.59 >More info	0.43 >More info	seedling day 1 unirradiated atm-1	12h		Original data
74	proline	0.64 >More info	0.38 >More info	noneHS			Original data	GEO bulk
75	seedling 12h after HZE WT	0.61 >More info	0.40 >More info	seedling day 1 unirradiated WT	12h		Original data
76	dde2-2 24hpi A. brassicicola	-0.55 >More info	-0.46 >More info	Col-0 9 hpi A. brassicicola		3rd-5th true leaves	Original data
77	SPT4-R3 seedlings0 DAS	0.65 >More info	0.36 >More info	Col-0 seedlings0 DAS		seedlings	Original data
78	LTN005-2 TSA	0.46 >More info	0.55 >More info	LTN012-2 Mock			Original data
79	WT no Pi	0.67 >More info	0.33 >More info	WT complete		seedlings	Original data
80	BI-1-3h IAA	0.64 >More info	0.34 >More info	BI-1-0h IAA		whole plant	Original data	GEO bulk
81	sdg2	0.63 >More info	0.35 >More info	wt		seedling	Original data	GEO bulk
82	erf5 erf6	-0.45 >More info	-0.53 >More info	WT+water	water	seedlings	Original data	GEO bulk
83	Col 8h	0.53 >More info	0.44 >More info	Col CA		Leaves	Original data
84	FarRed Light 4 h	0.45 >More info	0.52 >More info	White Light 4 h			Original data	Light treatments
85	35S::PI ap3-3 35S::AP-GR +DEX	0.44 >More info	0.52 >More info	0hr DEX			Original data	GEO bulk
86	arp6-10 24h at 27 ºC	0.66 >More info	0.29 >More info	Col-0 24h at 27 ºC		whole seedlings	Original data	GEO bulk
87	4C 1h	0.59 >More info	0.35 >More info	22C 1h			Original data	GEO bulk
88	Sulfometuron EC50	0.53 >More info	0.41 >More info	Carrier			Original data	GEO bulk
89	toc1-1-49hr	0.43 >More info	0.51 >More info	WT-untreated-49hr	none	seedlings aerial tissue	Original data	GEO bulk
90	Fei-0-3h IAA	0.56 >More info	0.37 >More info	Fei-0-0h IAA		whole plant	Original data	GEO bulk
91	Nicotinamide-53hr	0.39 >More info	0.54 >More info	WT-untreated-53hr	nicotinamide	aerial tissue	Original data	GEO bulk
92	ms1 unpollinated	-0.59 >More info	-0.34 >More info	WT 8h-pollinated		pistil	Original data	GEO bulk
93	Col-0-3h IAA	0.60 >More info	0.33 >More info	Col-0-0h IAA		whole plant	Original data	GEO bulk
94	4C 3h	0.60 >More info	0.33 >More info	22C 3h			Original data	GEO bulk
95	apum23	0.52 >More info	0.40 >More info	WT (Col-3)		aerial parts	Original data	GEO bulk
96	cdpk6-yfp	0.41 >More info	0.51 >More info	Kan		seedlings	Original data	GEO bulk
97	sid2-2 24hpi A. brassicicola	-0.54 >More info	-0.37 >More info	Col-0 9 hpi A. brassicicola		3rd-5th true leaves	Original data
98	WT seedlings IAA	0.41 >More info	0.50 >More info	WT seedlings control		Seedlings	Original data	GEO bulk
99	Leafminer damaged seedlings	0.34 >More info	0.56 >More info	Healthy seedlings		leaves	Original data	GEO bulk
100	C24-3h IAA	0.51 >More info	0.39 >More info	C24-0h IAA		whole plant	Original data	GEO bulk
101	9 hr Hypoxia 1 hr recovery IP RNA	0.50 >More info	0.40 >More info	9 hr Non-Stress IP RNA		seedlings	Original data	GEO bulk
102	root - 04% oxygen - 2h	-0.22 >More info	-0.68 >More info	root - 21% oxygen - 2h			Original data	GEO bulk
103	4C 1h	0.32 >More info	0.58 >More info	4C 0h			Original data	GEO bulk
104	Col0-PsmES4326-24hpi	0.28 >More info	0.61 >More info	Col0-mock-24hpi		leaf	Original data	GEO bulk
105	21h-DC3000 avrRpm1	0.32 >More info	0.57 >More info	21h-DC3000		leaves	Original data	GEO bulk
106	ahg2-1sid2-2	0.31 >More info	0.56 >More info	WT (Col) control			Original data	GEO bulk
107	R. solani AG2-1	0.51 >More info	0.36 >More info	control	Rhizoctonia solani AG2-1	whole seedling	Original data	GEO bulk
108	pip3 At2g19270 RNAi 24	-0.53 >More info	-0.33 >More info	Nd-1		whole plant	Original data	GEO bulk
109	Heat shock optimum	0.21 >More info	0.65 >More info	Heat shock baseline	Photosynthesis at optimum temperature	leaf first fully expanded	Original data	GEO bulk
110	pip3 At2g19270 RNAi 32	-0.55 >More info	-0.30 >More info	Nd-1		whole plant	Original data	GEO bulk
111	Salt Stress 24 h (shoot)	0.54 >More info	0.31 >More info	Stress mock 24 h (shoot)			Original data	Stress treatments
112	bri1-116	0.12 >More info	0.73 >More info	Col		seedling	Original data	GEO bulk
113	Laer Flg22(Agrobacterium) 1h	0.54 >More info	0.30 >More info	Laer Control		leaf discs	Original data	GEO bulk
114	npr1 sni1 ssn2 SA	0.56 >More info	0.27 >More info	npr1 sni1 SA	salicylic acid	seedling	Original data	GEO bulk
115	downy mildew cotyledons late stage	-0.50 >More info	-0.33 >More info	mock inoculated		Cotyledons	Original data	GEO bulk
116	CBF3 100mM NaCl	0.63 >More info	0.20 >More info	Ws 100mM NaCl	100mM NaCl	leaf	Original data	GEO bulk
117	Mutant lwd1_lwd2	0.50 >More info	0.32 >More info	Wildtype for phy mutants			Original data	GEO bulk
118	LWD1 and LWD2 in photoperiod regulation (lwd1lwd2 )	0.50 >More info	0.32 >More info	LWD1 and LWD2 in photoperiod regulation (wt )			Original data	GEO bulk
119	dor control	-0.62 >More info	-0.20 >More info	WT control			Original data	GEO bulk
120	CDB1-Knockout	-0.31 >More info	-0.51 >More info	WT			Original data	GEO bulk
121	atsf1-2 mutant seedling	0.50 >More info	0.31 >More info	Col-0 seedling		seedlings	Original data
122	hyl1	0.58 >More info	0.23 >More info	Col-0			Original data	GEO bulk
123	myb61 xylem	0.53 >More info	0.27 >More info	wt xylem		xylem	Original data	GEO bulk
124	D2O	0.53 >More info	0.27 >More info	H2O		seedling	Original data	GEO bulk
125	WT (Col-0) inflorescence moderate drought day 3	0.53 >More info	0.26 >More info	WT (Col-0) inflorescence well-watered day 0 [C02]		Unopen flower buds	Original data
126	high-R:FR bud uppermost	0.50 >More info	0.28 >More info	low-R:FR bud uppermost	high R	rosette axillary bud n	Original data	GEO bulk
127	Laer GA 2h	0.51 >More info	0.27 >More info	Laer Control		leaf discs	Original data	GEO bulk
128	root - 04% oxygen - 48h	-0.23 >More info	-0.55 >More info	root - 21% oxygen - 48h			Original data	GEO bulk
129	toc1-1-81hr	0.27 >More info	0.51 >More info	WT-untreated-81hr	none	seedlings aerial tissue	Original data	GEO bulk
130	gun5 control	-0.57 >More info	-0.21 >More info	Col-0 control			Original data	GEO bulk
131	hsfa2 KO	0.61 >More info	0.16 >More info	WT (Col-0)		whole seedling	Original data	GEO bulk
132	Red Light 45min	-0.18 >More info	-0.59 >More info	White Light 45min			Original data	Light treatments
133	toc1-1-73hr	0.26 >More info	0.51 >More info	WT-untreated-73hr	none	seedlings aerial tissue	Original data	GEO bulk
134	Col-0 under 4 days salt	0.50 >More info	0.26 >More info	Col-0 under control	4 days salt treatment	rosette	Original data
135	hst5	0.61 >More info	0.14 >More info	Col-0			Original data	GEO bulk
136	rosette Dark Wounded	0.24 >More info	0.50 >More info	rosette Dark Control			Original data	GEO bulk
137	CBF3 0mM NaCl	0.54 >More info	0.19 >More info	Ws 0mM NaCl	0mM NaCl	leaf	Original data	GEO bulk
138	etiolated cop1BBX22-GFPox	0.53 >More info	0.20 >More info	etiolated Col-0		whole seedlings	Original data	GEO bulk
139	2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr red light	-0.57 >More info	-0.16 >More info	2d dark-grown WT(Col-0)/1 hr red light			Original data	GEO bulk
140	pad4-est1b-1-doublemutant	0.59 >More info	0.14 >More info	pad4-mutant		developed rosette leaves	Original data	GEO bulk
141	Col-0-avrB-6h	0.21 >More info	0.51 >More info	Col-0-untreated-control	avrB	leaf tissue	Original data	GEO bulk
142	root - 08% oxygen - 48h	-0.08 >More info	-0.63 >More info	root - 21% oxygen - 48h			Original data	GEO bulk
143	ahg1-1	0.51 >More info	0.19 >More info	ABA control			Original data	GEO bulk
144	ahg3-1	0.50 >More info	0.19 >More info	ABA control			Original data	GEO bulk
145	PNO8 12 h	-0.19 >More info	-0.50 >More info	Mock 12 h			Original data	Effect of other inhibitors on seedlings
146	WT Shoot Hypoxia	-0.17 >More info	-0.51 >More info	WT Shoot Normoxia (mock)	Hypoxia	Shoot	Original data	GEO bulk
147	SOS1 100mM NaCl	0.53 >More info	0.14 >More info	Ws 100mM NaCl	100mM NaCl	leaf	Original data	GEO bulk
148	low CO2 + dark	-0.12 >More info	-0.54 >More info	normal CO2 + light			Original data	GEO bulk
149	AgNO3 3 h	0.12 >More info	0.53 >More info	Mock 3 h			Original data	Effect of ethylene inhibitors on seedlings
150	root cortex pH4.6	0.13 >More info	0.51 >More info	root cortex pH5.7			Original data	GEO bulk
151	A2hsfa1-ox in quadruple mutant	0.52 >More info	0.11 >More info	hsfa1 quadruple mutant		whole seedling	Original data	GEO bulk
152	toc1-1-61hr	0.06 >More info	0.56 >More info	WT-untreated-61hr	none	seedlings aerial tissue	Original data	GEO bulk
153	IAA/inhibitor A Treated	-0.51 >More info	-0.11 >More info	IAA Treated			Original data	GEO bulk
154	WT (Col-0) inflorescence well-watered day 3	-0.51 >More info	-0.11 >More info	WT (Col-0) inflorescence well-watered day 0		Unopen flower buds	Original data	GEO bulk
155	16C 4hs	0.51 >More info	0.11 >More info	L22-4hrs		whole plant excluding roots	Original data	GEO bulk
156	Laer MeJA 1h	0.53 >More info	0.09 >More info	Laer Control		leaf discs	Original data	GEO bulk
157	IAA7mII over-expressor IAA Treated	-0.07 >More info	0.69 >More info	empty vector IAA Treated			Original data	GEO bulk
158	WT-16ºC	0.55 >More info	0.05 >More info	WT-23ºC			Original data	GEO bulk
159	Col BTH	-0.07 >More info	0.67 >More info	Col		rosettes	Original data	GEO bulk
160	Shoot apex inflorescence (after bolting)	-0.06 >More info	0.65 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
161	seed germinating in countinuous light 24h SL	-0.08 >More info	0.67 >More info	Control for tissue data		seed	Original data	GEO bulk
162	shoot hypoxia total	-0.07 >More info	-0.51 >More info	shoot control total			Original data	GEO bulk
163	MYB46-GR DEX	0.57 >More info	0.01 >More info	MYB46-GR mock		Young rosette leaves (5-7th)	Original data	GEO bulk
164	hsfa2 KO heat shock	0.50 >More info	0.07 >More info	WT (Col-0) heat shock		whole seedling	Original data	GEO bulk
165	etiolated cop1	0.52 >More info	0.04 >More info	etiolated Col-0		whole seedlings	Original data	GEO bulk
166	30m light	0.04 >More info	0.52 >More info	before light		whole seedlings	Original data	GEO bulk
167	GA3 3 h (ga1)	-0.00 >More info	-0.53 >More info	Mock 3 h (ga1)			Original data	Basic hormone treatment of seedlings
168	Nicotinamide-57hr	0.02 >More info	0.50 >More info	WT-untreated-57hr	nicotinamide	aerial tissue	Original data	GEO bulk
169	Polysomal RNA 35S:HF-RPL18	-0.00 >More info	-0.52 >More info	Polysomal RNA csp1	12h non-stress	rosettes	Original data	GEO bulk
170	Mutant ag-12(flower)	0.51 >More info	0.00 >More info	Flowers stage12			Original data	Developmental series; organs / tissues at different ages
171	E.orontii Infection 6 h	-0.09 >More info	0.58 >More info	Uninfection 6 h			Original data	Elicitor treatments
172	siliques AtHb1 control	-0.04 >More info	0.52 >More info	siliques WT control	control	silique	Original data	GEO bulk
173	CCA1-ox 6am non-polysomal	-0.05 >More info	0.51 >More info	WT 6am non-polysomal		aerial part	Original data
174	pab polysome	0.58 >More info	-0.20 >More info	WT polysome		seedling shoot/aerial seedling	Original data
175	Aerobic e1 ate2	0.19 >More info	-0.54 >More info	Aerobic Col-0	aerobic (normal) conditions	seedlings	Original data	GEO bulk
176	spx1 spx2 resupplied Pi 4h	-0.52 >More info	0.24 >More info	WT resupplied Pi 4h		seedlings	Original data