4.0:Analysis result - correlation network
Home
Method
Manual
History
Module-based correlation network(MCN) centered on Col-0-30min IAA
> How to read results
Simple
All
>>Show Interactive view (test)
List of experiments correlated with "Col-0-30min IAA"
Download transcriptome of top 30
Score
Experiment
Correlation from
Col-0-30min IAA
Correlation to
Col-0-30min IAA
Control Experiment
Genotype
Treatment
Tissue
Link to
original data
Experimental
Category
Data set
Details
1
Col-0-30min IAA
1.00
>More info
1.00
>More info
Col-0-0h IAA
whole plant
Original data
GEO bulk
2
Col-0-1h IAA
0.90
>More info
0.92
>More info
Col-0-0h IAA
whole plant
Original data
GEO bulk
3
Fei-0-30min IAA
0.82
>More info
0.90
>More info
Fei-0-0h IAA
whole plant
Original data
GEO bulk
4
Bur-0-30min IAA
0.81
>More info
0.86
>More info
Bur-0h IAA
whole plant
Original data
GEO bulk
5
BI-1-1h IAA
0.82
>More info
0.83
>More info
BI-1-0h IAA
whole plant
Original data
GEO bulk
6
C24-30min IAA
0.82
>More info
0.83
>More info
C24-0h IAA
whole plant
Original data
GEO bulk
7
BI-1-30min IAA
0.83
>More info
0.78
>More info
BI-1-0h IAA
whole plant
Original data
GEO bulk
8
Fei-0-1h IAA
0.67
>More info
0.86
>More info
Fei-0-0h IAA
whole plant
Original data
GEO bulk
9
Col-0-3h IAA
0.78
>More info
0.73
>More info
Col-0-0h IAA
whole plant
Original data
GEO bulk
10
Bur-0-1h IAA
0.74
>More info
0.76
>More info
Bur-0h IAA
whole plant
Original data
GEO bulk
11
IAA 1 h
0.67
>More info
0.82
>More info
Mock 1 h
Original data
Basic hormone treatment of seedlings
12
IAA 0.5 h
0.66
>More info
0.81
>More info
Mock 0.5 h
Original data
Basic hormone treatment of seedlings
13
IAA Treated
0.57
>More info
0.82
>More info
Negative Control
Original data
GEO bulk
14
C24-1h IAA
0.64
>More info
0.74
>More info
C24-0h IAA
whole plant
Original data
GEO bulk
15
BI-1-3h IAA
0.72
>More info
0.62
>More info
BI-1-0h IAA
whole plant
Original data
GEO bulk
16
GR-bdl DEX IAA
-0.50
>More info
-0.82
>More info
GR-bdl IAA
Original data
GEO bulk
17
Bay-0-30min IAA
0.63
>More info
0.67
>More info
Bay-0-0h IAA
whole plant
Original data
GEO bulk
18
Sha-30min IAA
0.56
>More info
0.71
>More info
Sha-0h IAA
whole plant
Original data
GEO bulk
19
Bur-0-3h IAA
0.65
>More info
0.57
>More info
Bur-0h IAA
whole plant
Original data
GEO bulk
20
Sha-1h IAA
0.51
>More info
0.70
>More info
Sha-0h IAA
whole plant
Original data
GEO bulk
21
IAA 0.5h
0.42
>More info
0.79
>More info
control 0.5h
root
Original data
GEO bulk
22
C24-3h IAA
0.62
>More info
0.56
>More info
C24-0h IAA
whole plant
Original data
GEO bulk
23
Cycloheximide 3 h
0.58
>More info
0.60
>More info
Mock 3 h
Original data
Effect of other inhibitors on seedlings
24
Bay-0-1h IAA
0.46
>More info
0.72
>More info
Bay-0-0h IAA
whole plant
Original data
GEO bulk
25
1h +Pi
-0.34
>More info
-0.82
>More info
1h -Pi
root
Original data
GEO bulk
26
WT+chitooctaose
0.46
>More info
0.70
>More info
WT+water
chitooctaose
seedlings
Original data
GEO bulk
27
myb61 cork
0.38
>More info
0.76
>More info
wt cork
cork
Original data
GEO bulk
28
WT 6H Cold
0.42
>More info
0.71
>More info
WT control
Original data
GEO bulk
29
WT chitooctaose
0.50
>More info
0.61
>More info
WT water
Original data
GEO bulk
30
IAA 3 h
0.40
>More info
0.70
>More info
Mock 3 h
Original data
Basic hormone treatment of seedlings
31
myb61 xylem
0.35
>More info
0.75
>More info
wt xylem
xylem
Original data
GEO bulk
32
WT NAA/flg 1h
0.54
>More info
0.55
>More info
WT 0h
Leaf tissue
Original data
GEO bulk
33
Leaf systemic
0.43
>More info
0.66
>More info
Leaf control
vegetative leaf
Original data
GEO bulk
34
AtLysM RLK1 mutant chitooctaose
-0.46
>More info
-0.63
>More info
WT chitooctaose
Original data
GEO bulk
35
Mutant sav3-2 (SH)
-0.33
>More info
-0.75
>More info
Col-0 (SH)
Original data
GEO bulk
36
WT NAA 1h
0.44
>More info
0.64
>More info
WT 0h
Leaf tissue
Original data
GEO bulk
37
Col-0 2h NAA
0.42
>More info
0.66
>More info
Col-0 6h MOCK
Original data
GEO bulk
38
sav3-2 shade
-0.33
>More info
-0.75
>More info
Col-0 shade
seedlings
Original data
GEO bulk
39
35S:RPS4 eds1-2 2h
-0.31
>More info
-0.77
>More info
35S:RPS4 2h
leaves
Original data
40
Leaf wounded
0.33
>More info
0.74
>More info
Leaf control
vegetative leaf
Original data
GEO bulk
41
Fei-0-3h IAA
0.48
>More info
0.59
>More info
Fei-0-0h IAA
whole plant
Original data
GEO bulk
42
chito-octamer
0.46
>More info
0.60
>More info
Col Mock
Original data
GEO bulk
43
Rsch 8h
0.41
>More info
0.64
>More info
Rsch CA
Leaves
Original data
44
Selenate (root)
0.50
>More info
0.54
>More info
Ws (root)
Original data
GEO bulk
45
Root Selenate
0.50
>More info
0.54
>More info
Root control
40 micromolar selenate
Root
Original data
GEO bulk
46
WT no Pi
0.50
>More info
0.53
>More info
WT complete
seedlings
Original data
47
rosette Light Wounded
0.41
>More info
0.62
>More info
rosette Light Control
Original data
GEO bulk
48
ANOXIA
-0.40
>More info
-0.63
>More info
ANOXIA+SUCROSE
Original data
GEO bulk
49
abi1 hypocotyl
0.34
>More info
0.68
>More info
Ler hypocotyl
hypocotyl
Original data
GEO bulk
50
Laer pretreat JA Flg22 1h
0.48
>More info
0.53
>More info
Laer pretreat water control
leaf discs
Original data
GEO bulk
51
Laer pretreat GA Flg22 1h
0.30
>More info
0.71
>More info
Laer pretreat water control
leaf discs
Original data
GEO bulk
52
NAA 3h
0.51
>More info
0.49
>More info
before treatment
NAA
root
Original data
GEO bulk
53
bHLH122 ox
-0.27
>More info
-0.73
>More info
WT Col-0
bHLH122 overexpression
shoot
Original data
GEO bulk
54
aba1 hypocotyl
0.39
>More info
0.61
>More info
Ler hypocotyl
hypocotyl
Original data
GEO bulk
55
FLIGHT TAGESB plate6 ROOTS
0.33
>More info
0.67
>More info
GROUND CONTROL TAGESB plate6 ROOTS
plant tissue
Original data
56
Chitin
0.49
>More info
0.50
>More info
Col C
Original data
GEO bulk
57
Col-O low light
-0.50
>More info
-0.48
>More info
Col-O bule light
Original data
GEO bulk
58
chito-tetramer
0.42
>More info
0.56
>More info
Col Mock
Original data
GEO bulk
59
WT-Dry
0.33
>More info
0.65
>More info
WT-CK
dehydration treatment 1h
Original data
60
4C 2h(SOIL)
0.21
>More info
0.76
>More info
4C 0h(SOIL)
Original data
GEO bulk
61
Laer Flg22+GA 1h
0.44
>More info
0.52
>More info
Laer Control
leaf discs
Original data
GEO bulk
62
Wounding Stress3 h (shoot)
0.41
>More info
0.54
>More info
Stress mock 3 h (shoot)
Original data
Stress treatments
63
Col-0 shade
0.37
>More info
0.58
>More info
Col-0 light
seedlings
Original data
GEO bulk
64
Light
0.40
>More info
0.54
>More info
Control
Original data
GEO bulk
65
max4 hypocotyl
0.37
>More info
0.56
>More info
wt hypocotyl
hypocotyl
Original data
GEO bulk
66
seedling 6h after HZE WT
0.39
>More info
0.54
>More info
seedling day 1 unirradiated WT
6h
Original data
67
intact root auxin
0.50
>More info
0.43
>More info
intact root control
5 uM indole-3-acetic acid
whole root
Original data
GEO bulk
68
WT 3H Cold
0.19
>More info
0.74
>More info
WT control
Original data
GEO bulk
69
Propiconazole 12 h
-0.39
>More info
-0.53
>More info
Mock 12 h
Original data
Effect of GA inhibitors on seedlings
70
Whole root - low pH 1H
0.28
>More info
0.64
>More info
Whole root - Std pH 1H
pH 4.6 for 1 hr
Original data
GEO bulk
71
seedlings protease IV
0.35
>More info
0.56
>More info
seedlings nontreated control
whole seedling
Original data
72
Laer Flg22 1h
0.41
>More info
0.50
>More info
Laer Control
leaf discs
Original data
GEO bulk
73
12m.KCl
0.33
>More info
0.58
>More info
To.
KCl
14 day old Roots
Original data
GEO bulk
74
CDB1-Knockout
-0.29
>More info
-0.62
>More info
WT
Original data
GEO bulk
75
Transgenic LEC2GR Seedling 1h Dex
0.35
>More info
0.55
>More info
Transgenic LEC2GR Seedling 0h Dex
Original data
GEO bulk
76
ex2 flu dark 8hours/30 minute light
0.18
>More info
0.72
>More info
col dark 8hours/30 minute light
Original data
GEO bulk
77
dorn1-1 Root 100 mM ATP 30 min
-0.19
>More info
-0.71
>More info
Col-0 Root 100 mM ATP 30 min
Roots of 5 day-old seedlings
Original data
78
WT flg22 1h
0.37
>More info
0.52
>More info
WT 0h
Leaf tissue
Original data
GEO bulk
79
Brassinolide 3 h (det2)
0.32
>More info
0.57
>More info
Mock 3 h (det2)
Original data
Basic hormone treatment of seedlings
80
tga1 tga4 2h KCl
0.15
>More info
0.73
>More info
Col 0 2h KCl
5 mM KCl
root
Original data
GEO bulk
81
Col0-PsmES4326-24hpi
0.26
>More info
0.61
>More info
Col0-mock-24hpi
leaf
Original data
GEO bulk
82
Heat shock optimum
0.22
>More info
0.65
>More info
Heat shock baseline
Photosynthesis at optimum temperature
leaf first fully expanded
Original data
GEO bulk
83
root longitudinal zone-3 -Fe
0.29
>More info
0.58
>More info
root longitudinal zone-3 standard
Original data
GEO bulk
84
estradiole-induced ANAC059
0.33
>More info
0.53
>More info
transgenic (empty vector inducible system)
Original data
GEO bulk
85
Col 8h
0.34
>More info
0.52
>More info
Col CA
Leaves
Original data
86
tunicamycin
-0.36
>More info
-0.50
>More info
DMF
Original data
GEO bulk
87
WT flg22 2h
0.35
>More info
0.50
>More info
WT 0h
Leaf tissue
Original data
GEO bulk
88
HARAP aerobic
-0.23
>More info
-0.62
>More info
WT aerobic
aerobic
Original data
GEO bulk
89
empty vector IAA Treated
0.18
>More info
0.66
>More info
empty vector mock
Original data
GEO bulk
90
WT (Ler) CK25
0.28
>More info
0.56
>More info
WT (Ler) CK0
cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin.
tissue culture
Original data
GEO bulk
91
opr3 JA 0.5 h
0.07
>More info
0.77
>More info
opr3 0 h
Original data
GEO bulk
92
current injection
0.29
>More info
0.55
>More info
no current injection
4 microampere of electric current for 1 second
Original data
GEO bulk
93
IAA 2h
0.28
>More info
0.56
>More info
control 2h
root
Original data
GEO bulk
94
FarRed Light 45min
0.09
>More info
0.75
>More info
White Light 45min
Original data
Light treatments
95
WT NAA 2h
0.14
>More info
0.70
>More info
WT 0h
Leaf tissue
Original data
GEO bulk
96
Te 8h
0.33
>More info
0.50
>More info
Te CA
Leaves
Original data
97
1hr-pH4.5
0.28
>More info
0.54
>More info
1hr-pH6
1hr pH 4.5
roots
Original data
GEO bulk
98
Leafminer damaged seedlings
0.26
>More info
0.56
>More info
Healthy seedlings
leaves
Original data
GEO bulk
99
short 14-degree-
0.28
>More info
0.53
>More info
control short
Original data
GEO bulk
100
6h volatiles Sp. HRO-C48
0.18
>More info
0.63
>More info
6h untreated
whole seedling
Original data
GEO bulk
101
GA
0.23
>More info
0.58
>More info
none
GA
Rosette
Original data
GEO bulk
102
vtc2 mature somatic embryo
0.17
>More info
0.63
>More info
WT mature somatic embryo
mature somatic embryo
Original data
GEO bulk
103
Brassinolide 1 h (det2)
0.10
>More info
0.67
>More info
Mock 1 h (det2)
Original data
Basic hormone treatment of seedlings
104
npr1 sni1 brca2a SA
-0.26
>More info
-0.51
>More info
npr1 sni1 SA
salicylic acid
seedling
Original data
GEO bulk
105
Whole root - low pH 3H
0.23
>More info
0.54
>More info
Whole root - Std pH 3H
pH 4.6 for 3 hr
Original data
GEO bulk
106
whole roots 140 mM NaCl 30 minutes
0.19
>More info
0.57
>More info
whole roots standard
Original data
GEO bulk
107
ex1 flu dark 8hours/30 minute light
0.04
>More info
0.71
>More info
col dark 8hours/30 minute light
Original data
GEO bulk
108
4C 1h
0.17
>More info
0.57
>More info
4C 0h
Original data
GEO bulk
109
35S:VND7-VP16-GR+CHX
0.16
>More info
0.56
>More info
harboring empty vector+CHX
10mM cycloheximide (CHX) 6hrs
whole seedlings
Original data
GEO bulk
110
root longitudinal zone-4 -Fe
0.22
>More info
0.50
>More info
root longitudinal zone-4 standard
Original data
GEO bulk
111
IAA7mII over-expressor IAA Treated
0.03
>More info
0.69
>More info
empty vector IAA Treated
Original data
GEO bulk
112
TA induced
0.13
>More info
0.59
>More info
Methanol TA
Suspension cells
Original data
GEO bulk
113
IXB induced
0.11
>More info
0.61
>More info
Methanol IXB
Suspension cells
Original data
GEO bulk
114
Protoplast Induced
0.16
>More info
0.55
>More info
Uninduced
Original data
GEO bulk
115
Col whole leaf 3dpi
-0.14
>More info
-0.57
>More info
Col whole leaf 0h UI
whole leaf
Original data
GEO bulk
116
low R/FR mock spray
0.18
>More info
0.51
>More info
high R/FR mock spray
low R/FR mock spray
Original data
GEO bulk
117
IAA 1h
0.04
>More info
0.62
>More info
control 1h
root
Original data
GEO bulk
118
flu dark 8hours/30 minute light
-0.06
>More info
0.71
>More info
col dark 8hours/30 minute light
Original data
GEO bulk
119
bak1-3 +Pep2 2h
0.00
>More info
0.64
>More info
WT +Pep2 2h
Pep2
Original data
GEO bulk
120
SCR-GR Time 1H Dex
0.06
>More info
0.56
>More info
SCR-GR Time 0H Dex
Dex media for 1 hour
Original data
GEO bulk
121
Col BTH
-0.06
>More info
0.67
>More info
Col
rosettes
Original data
GEO bulk
122
iron minus 6 h
0.08
>More info
0.51
>More info
iron +6 h
root
Original data
GEO bulk
123
CCA1-ox 6am non-polysomal
0.08
>More info
0.51
>More info
WT 6am non-polysomal
aerial part
Original data
124
root longitudinal zone-2 -Fe
0.08
>More info
0.50
>More info
root longitudinal zone-2 standard
Original data
GEO bulk
125
opr3 OPDA 0.5 h
0.01
>More info
0.57
>More info
opr3 0 h
Original data
GEO bulk
126
toc1-1-85hr
0.06
>More info
-0.54
>More info
WT-untreated-85hr
none
seedlings aerial tissue
Original data
GEO bulk
127
ABA SA 24h
-0.05
>More info
0.53
>More info
EtOH 24h
24hr
Original data
GEO bulk
128
Shoot apex inflorescence (after bolting)
-0.23
>More info
0.65
>More info
Control for tissue data
Original data
Developmental series; organs / tissues at different ages
129
seed germinating in countinuous light 24h SL
-0.25
>More info
0.67
>More info
Control for tissue data
seed
Original data
GEO bulk
130
JA 24h
-0.16
>More info
0.56
>More info
EtOH 24h
24hr
Original data
GEO bulk
131
bri1-116
-0.34
>More info
0.73
>More info
Col
seedling
Original data
GEO bulk
132
siliques AtHb1 control
-0.15
>More info
0.52
>More info
siliques WT control
control
silique
Original data
GEO bulk