4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Col-0 2h NAA
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List of experiments correlated with "Col-0 2h NAA"  Help Download transcriptome of top 30
Score Experiment Correlation from
Col-0 2h NAA		 Correlation to
Col-0 2h NAA		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Col-0 2h NAA 1.00 >More info 1.00 >More info Col-0 6h MOCK Original data GEO bulk
2 Col-0 6h NAA 0.90 >More info 0.87 >More info Col-0 6h MOCK Original data GEO bulk
3 NAA 3h 0.89 >More info 0.87 >More info before treatment NAA root Original data GEO bulk
4 slr-1 2h NAA -0.79 >More info -0.82 >More info Col-0 2h NAA Original data GEO bulk
5 IAA 3 h 0.81 >More info 0.77 >More info Mock 3 h Original data Basic hormone treatment of seedlings
6 slr-1 6h NAA -0.81 >More info -0.77 >More info Col-0 6h NAA Original data GEO bulk
7 intact root auxin 0.85 >More info 0.72 >More info intact root control 5 uM indole-3-acetic acid whole root Original data GEO bulk
8 NAA 6h 0.83 >More info 0.71 >More info before treatment NAA root Original data GEO bulk
9 IAA 2h 0.77 >More info 0.74 >More info control 2h root Original data GEO bulk
10 Chemically 0.68 >More info 0.82 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
11 IAA 0.5h 0.73 >More info 0.73 >More info control 0.5h root Original data GEO bulk
12 roots IAA 0.73 >More info 0.69 >More info roots mock Original data GEO bulk
13 Fei-0-1h IAA 0.77 >More info 0.63 >More info Fei-0-0h IAA whole plant Original data GEO bulk
14 Fei-0-3h IAA 0.70 >More info 0.69 >More info Fei-0-0h IAA whole plant Original data GEO bulk
15 Mutant iaa5_6_19(IAA) 0.73 >More info 0.64 >More info Col (IAA) Original data GEO bulk
16 IAA 1 h 0.76 >More info 0.60 >More info Mock 1 h Original data Basic hormone treatment of seedlings
17 aux1 mutant roots air -0.70 >More info -0.65 >More info roots IAA Original data GEO bulk
18 C24-3h IAA 0.73 >More info 0.61 >More info C24-0h IAA whole plant Original data GEO bulk
19 Col-0-3h IAA 0.76 >More info 0.54 >More info Col-0-0h IAA whole plant Original data GEO bulk
20 Col-0 0h NAA 0.58 >More info 0.71 >More info Col-0 6h MOCK Original data GEO bulk
21 Col-0-1h IAA 0.78 >More info 0.50 >More info Col-0-0h IAA whole plant Original data GEO bulk
22 (Ws-2)+100 uM As 0.59 >More info 0.69 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
23 Mutant nph4-1 (IAA) -0.73 >More info -0.54 >More info Col (IAA) Original data GEO bulk
24 dicamba 0.66 >More info 0.61 >More info WT mock whole seedling Original data GEO bulk
25 IAA Treated 0.75 >More info 0.51 >More info Negative Control Original data GEO bulk
26 C24-1h IAA 0.71 >More info 0.54 >More info C24-0h IAA whole plant Original data GEO bulk
27 Mutant nph4-1_arf19-1 (IAA) -0.73 >More info -0.52 >More info Col (IAA) Original data GEO bulk
28 IAA 1h 0.64 >More info 0.60 >More info control 1h root Original data GEO bulk
29 BI-1-3h IAA 0.66 >More info 0.57 >More info BI-1-0h IAA whole plant Original data GEO bulk
30 root Dosed gold 0.60 >More info 0.62 >More info root No gold .125 mM gold 24 h roots Original data
31 0.125 mM gold 24 h 0.60 >More info 0.62 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
32 WT seedlings IAA 0.60 >More info 0.62 >More info WT seedlings control Seedlings Original data GEO bulk
33 Sha-1h IAA 0.75 >More info 0.46 >More info Sha-0h IAA whole plant Original data GEO bulk
34 BI-1-1h IAA 0.74 >More info 0.45 >More info BI-1-0h IAA whole plant Original data GEO bulk
35 Bur-0-1h IAA 0.69 >More info 0.49 >More info Bur-0h IAA whole plant Original data GEO bulk
36 5-Triiodobenzoic acid3 h 0.49 >More info 0.68 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
37 IAA 4h 0.65 >More info 0.50 >More info control 4h root Original data GEO bulk
38 Bur-0-3h IAA 0.64 >More info 0.51 >More info Bur-0h IAA whole plant Original data GEO bulk
39 IAA 0.5 h 0.59 >More info 0.55 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
40 R. solani AG8 0.52 >More info 0.62 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
41 whole roots 140 mM NaCl 4 hour 0.46 >More info 0.68 >More info whole roots standard Original data GEO bulk
42 (Col-0)+100 uM As 0.52 >More info 0.61 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
43 (Col-0)+200 uM As 0.52 >More info 0.61 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
44 empty vector IAA Treated 0.49 >More info 0.63 >More info empty vector mock Original data GEO bulk
45 Cocultivation 8 hrs root 0.48 >More info 0.63 >More info Mock cocultivation 8 hrs root Root Original data
46 Fei-0-30min IAA 0.61 >More info 0.48 >More info Fei-0-0h IAA whole plant Original data GEO bulk
47 Whole root - low pH 3H 0.49 >More info 0.60 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
48 Bay-0-1h IAA 0.67 >More info 0.41 >More info Bay-0-0h IAA whole plant Original data GEO bulk
49 Col-0-30min IAA 0.66 >More info 0.42 >More info Col-0-0h IAA whole plant Original data GEO bulk
50 root endodermis and quiescent center 40 mM NaCl 0.45 >More info 0.63 >More info root endodermis and quiescent center Original data GEO bulk
51 -Sulfate 24 h 0.37 >More info 0.70 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
52 root longitudinal zone-4 NaCl 0.37 >More info 0.70 >More info root longitudinal zone-4 Original data GEO bulk
53 hira-root -0.59 >More info -0.44 >More info WT-root root Original data
54 naxillin 3h 0.52 >More info 0.51 >More info before treatment naxillin root Original data GEO bulk
55 6-trichlorophenoxyacetic acid 3 h 0.41 >More info 0.62 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
56 root BA 12h 0.40 >More info 0.63 >More info root control 12h boron (5mM) root Original data GEO bulk
57 aerial organ callus inducing medium 48 h 0.62 >More info 0.40 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
58 C24-30min IAA 0.60 >More info 0.42 >More info C24-0h IAA whole plant Original data GEO bulk
59 IAA 8h 0.58 >More info 0.43 >More info control 8h root Original data GEO bulk
60 ABA 1 h 0.38 >More info 0.63 >More info Mock 1 h Original data Basic hormone treatment of seedlings
61 WT NAA 1h 0.45 >More info 0.56 >More info WT 0h Leaf tissue Original data GEO bulk
62 oligomycin 4 h 0.51 >More info 0.49 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
63 aerial organ callus inducing medium 24h 0.63 >More info 0.36 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
64 Bur-0-30min IAA 0.57 >More info 0.42 >More info Bur-0h IAA whole plant Original data GEO bulk
65 AgNO3 3 h 0.37 >More info 0.62 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
66 Whole root - low pH 12H 0.48 >More info 0.51 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
67 Cycloheximide 3 h 0.54 >More info 0.44 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
68 Fe starvation 72 h 0.46 >More info 0.52 >More info Control Original data GEO bulk
69 whole roots -Fe 72 hour 0.46 >More info 0.52 >More info whole roots standard Original data GEO bulk
70 inhibitor B Treated 0.35 >More info 0.63 >More info Negative Control Original data GEO bulk
71 SA 0.43 >More info 0.55 >More info WT mock Whole seedling Original data GEO bulk
72 TNT-seedlings 0.23 >More info 0.74 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
73 Whole root - low pH 24H 0.55 >More info 0.41 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
74 naxillin 6h 0.57 >More info 0.39 >More info before treatment naxillin root Original data GEO bulk
75 root callus inducing medium 24h 0.57 >More info 0.39 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
76 whole roots -Fe 48 hour 0.44 >More info 0.52 >More info whole roots standard Original data GEO bulk
77 P-chlorophenoxy- isobutyric acid 3 h 0.17 >More info 0.78 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
78 aerial organ callus inducing medium 12 h 0.58 >More info 0.37 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
79 Sha-3h IAA 0.64 >More info 0.31 >More info Sha-0h IAA whole plant Original data GEO bulk
80 Laer pretreat GA Flg22 1h 0.24 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
81 Leafminer damaged seedlings 0.38 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
82 seedlings-week-old RECA1-overexpressing
transgenic		 0.40 >More info 0.54 >More info seedlings-week-old Col-0 seedlings Original data
83 NAA -AA 0.53 >More info 0.40 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
84 aerial organ callus inducing medium 96 h 0.55 >More info 0.38 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
85 whole roots 140 mM NaCl 1 hour 0.40 >More info 0.53 >More info whole roots standard Original data GEO bulk
86 Mutant iaa17-6 -0.75 >More info -0.18 >More info Col Original data GEO bulk
87 Whole root - low pH 6H 0.42 >More info 0.51 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
88 ABA 3 h 0.38 >More info 0.54 >More info Mock 3 h Original data Basic hormone treatment of seedlings
89 Mutant iaa17-6 (IAA) 0.77 >More info 0.14 >More info Col (IAA) Original data GEO bulk
90 Phytoprostane A1 4 h 0.26 >More info 0.65 >More info Col-0 Original data GEO bulk
91 inhibitor A Treated 0.37 >More info 0.54 >More info Negative Control Original data GEO bulk
92 ABA DFPM 0.39 >More info 0.52 >More info control Original data GEO bulk
93 NaCl Col 0.31 >More info 0.60 >More info Col Original data GEO bulk
94 Heat shock optimum 0.25 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
95 cat2-2; 8h switch to ambient CO2 concentrations; 0.13 >More info 0.77 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
96 BI-1-30min IAA 0.57 >More info 0.33 >More info BI-1-0h IAA whole plant Original data GEO bulk
97 Col0-PsmES4326-24hpi 0.29 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
98 gun1gun5 far-red pretreated -0.34 >More info -0.55 >More info WT far-red pretreated Original data GEO bulk
99 root callus inducing medium 12 h 0.56 >More info 0.32 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
100 WT+H2O2 0.28 >More info 0.60 >More info WT H2O2 Original data GEO bulk
101 seedling -S Exp 0.26 >More info 0.62 >More info seedling FN Exp seedling Original data
102 Bay-0-3h IAA 0.58 >More info 0.30 >More info Bay-0-0h IAA whole plant Original data GEO bulk
103 Seedling KUA1-IOX est 0.30 >More info 0.57 >More info Seedling KUA1-IOX mock Original data
104 Sha-30min IAA 0.52 >More info 0.34 >More info Sha-0h IAA whole plant Original data GEO bulk
105 root cells columella root cap -Fe 0.55 >More info 0.31 >More info whole roots standard Original data GEO bulk
106 whole roots 140 mM NaCl 16 hour 0.36 >More info 0.50 >More info whole roots standard Original data GEO bulk
107 root callus inducing medium 48 h 0.57 >More info 0.29 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
108 Bay-0-30min IAA 0.54 >More info 0.31 >More info Bay-0-0h IAA whole plant Original data GEO bulk
109 ANOXIA -0.17 >More info -0.68 >More info ANOXIA+SUCROSE Original data GEO bulk
110 Mutant arf2-6 (IAA) 0.54 >More info 0.30 >More info Col (IAA) Original data GEO bulk
111 Whole root - S 3H 0.18 >More info 0.65 >More info Whole root - S 0H Original data GEO bulk
112 dor drought 0.28 >More info 0.54 >More info WT drought Original data GEO bulk
113 root cells epidermis and lateral root cap -Fe 0.54 >More info 0.26 >More info whole roots standard Original data GEO bulk
114 plant (tga2-5-6) 4h phytoprostane A1 0.18 >More info 0.62 >More info plant (tga2-5-6) 4h control Original data GEO bulk
115 9 hr Hypoxia 1 hr recovery Total RNA 0.28 >More info 0.52 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
116 Red/FR Light45min 0.03 >More info 0.76 >More info FarRed Light 45min Original data Light treatments
117 Col BTH 0.11 >More info 0.67 >More info Col rosettes Original data GEO bulk
118 auxin and brassinazole seedlings -0.52 >More info -0.25 >More info auxin seedlings Original data GEO bulk
119 root callus inducing medium 96 h 0.54 >More info 0.23 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
120 Mutant iaa5_6_19 -0.75 >More info -0.02 >More info Col Original data GEO bulk
121 35S:RPS4 eds1-2 2h -0.26 >More info -0.51 >More info 35S:RPS4 2h leaves Original data
122 -Sulfate 2 h 0.23 >More info 0.53 >More info Mock 2 h (1500uM sulfate) Original data Response to sulfate limitation
123 9m.KCl 0.18 >More info 0.58 >More info To. KCl 14 day old Roots Original data GEO bulk
124 oligomycin 1 h 0.25 >More info 0.51 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
125 plant (Col-0) 4h phytoprostane A1 0.09 >More info 0.66 >More info plant (tga2-5-6) 4h control Original data GEO bulk
126 M6PR transgenic leaf 100mM NaCl -0.23 >More info -0.52 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
127 Split KNO3 roots - 8hours -0.18 >More info -0.57 >More info Split KCl roots - 8hours 5mM KNO3 on ONE side for 8 hours roots Original data GEO bulk
128 Hydrogen Peroxide 500 uM 0.14 >More info 0.61 >More info Control RB and PER Hydrogen Peroxide Original data
129 WT 3h -P 0.14 >More info 0.58 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
130 atgsnor1-3-avrB-6h 0.20 >More info 0.51 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
131 IAA/inhibitor B Treated 0.19 >More info 0.51 >More info IAA Treated Original data GEO bulk
132 Ibuprofen 3 h 0.08 >More info 0.59 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
133 cat2-short-day 4d 0.08 >More info 0.59 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
134 anac017-2 water 3h 0.15 >More info 0.51 >More info WT water 3h 3h_water Original data GEO bulk
135 GO5; 8h switch to ambient CO2 concentrations; 0.14 >More info 0.52 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
136 ex1 flu dark 8hours/30 minute light 0.12 >More info 0.53 >More info col dark 8hours/30 minute light Original data GEO bulk
137 Imidazolinone EC50 0.15 >More info 0.50 >More info Carrier (Imidazolinone) Original data GEO bulk
138 siliques AtHb1 control 0.12 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
139 seed germinating in countinuous light 24h SL -0.03 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
140 Mutant arf2-6 -0.66 >More info 0.04 >More info Col Original data GEO bulk
141 CCA1-ox 6am non-polysomal 0.11 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
142 WT-Dry 0.11 >More info 0.50 >More info WT-CK dehydration treatment 1h Original data
143 Shoot apex inflorescence (after bolting) -0.06 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
144 bri1-116 -0.15 >More info 0.73 >More info Col seedling Original data GEO bulk
145 Shoot -Cs 0.08 >More info 0.50 >More info Control-shoot Original data GEO bulk
146 root longitudinal zone-3 pH 4.6 -0.03 >More info 0.58 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
147 ptpks2 -0.12 >More info 0.63 >More info Col-WT leaves Original data GEO bulk
148 IAA7mII over-expressor IAA Treated -0.40 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk