4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on rcf1-1 cold 12h
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List of experiments correlated with "rcf1-1 cold 12h"  Help Download transcriptome of top 30
Score Experiment Correlation from
rcf1-1 cold 12h		 Correlation to
rcf1-1 cold 12h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 rcf1-1 cold 12h 1.00 >More info 1.00 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
2 rcf1-1 cold 24h 0.80 >More info 0.85 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
3 B.cinerea 18 h infection 0.64 >More info 0.75 >More info Mock 18 h Original data Botrytis cinerea infection
4 Botrytis cinerea 18h 0.64 >More info 0.75 >More info control 18h Original data GEO bulk
5 rcf1-1 cold 0h 0.68 >More info 0.65 >More info WT cold 0h Control seedlings Original data GEO bulk
6 pnp1-1 1wk +P 0.73 >More info 0.59 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
7 Botrytis cinerea 48h 0.63 >More info 0.66 >More info control 48h Original data GEO bulk
8 myb3 myb3r4d 0.49 >More info 0.78 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
9 flu over-tAPX 0.63 >More info 0.62 >More info WT Col Original data GEO bulk
10 flu 0.61 >More info 0.63 >More info WT Col Original data GEO bulk
11 Shoot -Cs 0.55 >More info 0.69 >More info Control-shoot Original data GEO bulk
12 Col-0 9 hpi A. brassicicola 0.61 >More info 0.61 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
13 Col0-PsmES4326-24hpi 0.61 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
14 rosette Dark Wounded 0.53 >More info 0.68 >More info rosette Dark Control Original data GEO bulk
15 pnp1-1 3h +P 0.65 >More info 0.56 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
16 gun1gun5 far-red pretreated -0.56 >More info -0.65 >More info WT far-red pretreated Original data GEO bulk
17 Sulfometuron EC50 0.59 >More info 0.62 >More info Carrier Original data GEO bulk
18 ceh1 mutant 0.57 >More info 0.63 >More info Parent line Original data
19 ein2-1 9 hpi A. brassicicola 0.63 >More info 0.56 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
20 sta1 0.54 >More info 0.64 >More info WT Original data GEO bulk
21 IMI 4mM 0.62 >More info 0.56 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
22 msh1 albino 0.60 >More info 0.56 >More info WT aerial part Original data GEO bulk
23 ice1 24H Cold 0.67 >More info 0.49 >More info WT 24H Cold Original data GEO bulk
24 Col-Luc WT 3h antimycin A 0.63 >More info 0.53 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
25 WT 2-4h Xanthomonas 0.57 >More info 0.58 >More info WT T0 Original data GEO bulk
26 ice1 6H Cold 0.56 >More info 0.59 >More info WT 6H Cold Original data GEO bulk
27 ERF96OE 0.56 >More info 0.59 >More info WT leaf Original data
28 HopZ1a treated 0.60 >More info 0.55 >More info col Original data GEO bulk
29 shoots bhlh100/101 0uM Fe 0.69 >More info 0.45 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
30 anac017-1 AntimycinA 3h -0.57 >More info -0.57 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
31 35S::PI ap3-3 35S::AP-GR +DEX 0.44 >More info 0.70 >More info 0hr DEX Original data GEO bulk
32 ice1 control 0.59 >More info 0.54 >More info WT control Original data GEO bulk
33 IRP1-OE-Ctrl--root 0.63 >More info 0.50 >More info COL-0-Ctrl--root root Original data
34 anac017-1 H2O2 3h -0.62 >More info -0.50 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
35 rao2 H2O2 3h -0.55 >More info -0.56 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
36 ani1 T0.5 -0.43 >More info -0.68 >More info WT T0.5 root tissue Original data GEO bulk
37 DC3000 24h 0.54 >More info 0.57 >More info Mock 24h DC3000 Original data GEO bulk
38 anac017-2 AntimycinA 3h -0.57 >More info -0.53 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
39 hrcC 0.57 >More info 0.53 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
40 WT flg22 2h 0.46 >More info 0.64 >More info WT 0h Leaf tissue Original data GEO bulk
41 HopZ1a treated ulp1c ulp1d 0.55 >More info 0.54 >More info col Original data GEO bulk
42 Fenclorim 4hr 0.55 >More info 0.54 >More info Acetone 4hr root Original data GEO bulk
43 leaf13 0.53 >More info 0.56 >More info unwounded leaves none Original data GEO bulk
44 rosette Light Wounded 0.49 >More info 0.60 >More info rosette Light Control Original data GEO bulk
45 Wounding Stress3 h (shoot) 0.46 >More info 0.62 >More info Stress mock 3 h (shoot) Original data Stress treatments
46 tunicamycin -0.54 >More info -0.53 >More info DMF Original data GEO bulk
47 del1-1 mutant 5d uninfected 0.50 >More info 0.57 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
48 ASL9-ox -0.60 >More info -0.47 >More info WT aerial parts of seedlings Original data GEO bulk
49 hrpA fliC 7h 0.49 >More info 0.58 >More info Mock 7h hrpA fliC Original data GEO bulk
50 S15-118 0.49 >More info 0.58 >More info wt Original data GEO bulk
51 col-5 hrpA 12h 0.55 >More info 0.51 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
52 WT Col-0 Bgh inoculated 0.52 >More info 0.54 >More info WT Col-0 Un-inoculated Original data GEO bulk
53 WT 90-105 min Xanthomonas 0.49 >More info 0.57 >More info WT T0 Original data GEO bulk
54 essp4/sdg8-5 mutant 0.58 >More info 0.46 >More info wild type leaf Original data GEO bulk
55 WT AntimycinA 3h 0.55 >More info 0.49 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
56 PAHs stress 0.52 >More info 0.52 >More info exp control phenanthrene whole plants Original data GEO bulk
57 edr1 18 h powdery mildew 0.59 >More info 0.45 >More info Col-0 18 h powdery mildew Original data GEO bulk
58 Leafminer damaged seedlings 0.48 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
59 apk1 apk2 0.53 >More info 0.50 >More info Col0-control whole rosette Original data GEO bulk
60 Col-0 flu HL 3h 0.57 >More info 0.46 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
61 Mock pft1 leaf 0.34 >More info 0.69 >More info Mock Col-0 leaf water leaf Original data GEO bulk
62 Pst-DC3000(avrRpm1)-4hpi 0.53 >More info 0.49 >More info Pst-DC3000-4hpi Original data GEO bulk
63 coi1-16 ein2 sid2 ctrl -0.60 >More info -0.42 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
64 sid2-2 9 hpi A. brassicicola 0.55 >More info 0.47 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
65 Ba1 UV 0.34 >More info 0.68 >More info Ba1 mock UV seedling Original data
66 gpa1-4/agb1-2 ozone 2d -0.48 >More info -0.54 >More info Col ozone 2d ozone Original data GEO bulk
67 hrpA 7h 0.47 >More info 0.55 >More info Mock 7h hrpA Original data GEO bulk
68 DC3000 7h 0.52 >More info 0.49 >More info Mock 7h DC3000 Original data GEO bulk
69 downy mildew cotyledons late stage 0.53 >More info 0.48 >More info mock inoculated Cotyledons Original data GEO bulk
70 ataf1-1 mutant Col-0 Bgh inoculated 0.48 >More info 0.53 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
71 Imidazolinone EC50 0.42 >More info 0.59 >More info Carrier (Imidazolinone) Original data GEO bulk
72 atsf1-2 mutant seedling 0.46 >More info 0.55 >More info Col-0 seedling seedlings Original data
73 Col-0 under 4 days salt 0.55 >More info 0.45 >More info Col-0 under control 4 days salt treatment rosette Original data
74 pmr5 pmr6 0.50 >More info 0.50 >More info Col-0 Original data GEO bulk
75 Methyl Jasmonate 3 h 0.48 >More info 0.52 >More info Mock 3 h Original data Basic hormone treatment of seedlings
76 erf104-ko Flg22 4h 0.45 >More info 0.55 >More info erf104-ko H2O 4h Original data GEO bulk
77 WT 3h -P 0.44 >More info 0.56 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
78 pmr5 0.48 >More info 0.52 >More info Col-0 Original data GEO bulk
79 GO5; 8h switch to ambient CO2 concentrations; 0.41 >More info 0.58 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
80 AvrRpt2 Col-0 6hpi 0.51 >More info 0.47 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
81 Glyphosate EC50 0.58 >More info 0.40 >More info Carrier (Glyphosate) Original data GEO bulk
82 Mutant arf2-6 -0.55 >More info -0.42 >More info Col Original data GEO bulk
83 Pto inoculated 0.51 >More info 0.46 >More info col Original data GEO bulk
84 penta Alternaria 3dpi 0.56 >More info 0.41 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
85 Col whole leaf 7dpi 0.47 >More info 0.50 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
86 WT+chitooctaose 0.39 >More info 0.58 >More info WT+water chitooctaose seedlings Original data GEO bulk
87 current injection 0.40 >More info 0.57 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
88 DFPM 0.56 >More info 0.40 >More info control Original data GEO bulk
89 GST NPP1 4 h (leaf) 0.51 >More info 0.45 >More info Mock 4 h (leaf) Original data Elicitor treatments
90 cpr5npr1svi1 0.50 >More info 0.46 >More info WT(COL) Original data GEO bulk
91 Shoot -K 0.58 >More info 0.38 >More info Control-shoot Original data GEO bulk
92 Methyl Jasmonate 1 h 0.52 >More info 0.44 >More info Mock 1 h Original data Basic hormone treatment of seedlings
93 K starvation (shoot) 0.58 >More info 0.38 >More info Ws (shoot) Original data GEO bulk
94 ice1 3H Cold 0.53 >More info 0.42 >More info WT 3H Cold Original data GEO bulk
95 Mature callus 0.50 >More info 0.45 >More info Young callus hypocotyls Original data GEO bulk
96 Te ozone 0.57 >More info 0.38 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
97 UV Stress 24 h (shoot) 0.44 >More info 0.51 >More info Stress mock 24 h (shoot) Original data Stress treatments
98 lht1 untreated 0.44 >More info 0.51 >More info WT untreated untreated leaf Original data GEO bulk
99 abh1 -ABA 0.45 >More info 0.50 >More info Col-0 -ABA Original data GEO bulk
100 WT-Dry 0.32 >More info 0.63 >More info WT-CK dehydration treatment 1h Original data
101 seedlings-week-old RECA1-overexpressing
transgenic		 0.41 >More info 0.54 >More info seedlings-week-old Col-0 seedlings Original data
102 sdg8-2 mutant 0.55 >More info 0.39 >More info wild type leaf Original data GEO bulk
103 Primisulfuron EC50 0.39 >More info 0.55 >More info Carrier (primisulfuron) Original data GEO bulk
104 Triazolopyrimidine EC50 0.39 >More info 0.55 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
105 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.53 >More info 0.41 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
106 pnp1-1 1wk -P 0.52 >More info 0.42 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
107 CHS-silenced type -0.57 >More info -0.37 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
108 msh1 recA3 untreated 0.43 >More info 0.51 >More info WT untreated above-ground parts Original data GEO bulk
109 Heat shock optimum 0.29 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
110 Elevated CO2 AMPLE N DAY 0.44 >More info 0.50 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
111 Elevated CO2 fully expanded leaf 0.55 >More info 0.38 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
112 Whole root - S 3H 0.38 >More info 0.55 >More info Whole root - S 0H Original data GEO bulk
113 ulp1c ulp1d +Pto 0.50 >More info 0.43 >More info ulp1c ulp1d mock Original data GEO bulk
114 mkk1/mkk2 24h BTH rep 0.51 >More info 0.42 >More info Col-0 24h BTH rep Original data GEO bulk
115 seedlings protease IV 0.42 >More info 0.51 >More info seedlings nontreated control whole seedling Original data
116 pho1 0.54 >More info 0.38 >More info Col2WT Original data GEO bulk
117 Tsu -Fe 48h Shoots 0.39 >More info 0.53 >More info Tsu +Fe 24h Shoots Original data GEO bulk
118 PBZ 0.41 >More info 0.51 >More info none PBZ Rosette Original data GEO bulk
119 rao2 AntimycinA 3h -0.41 >More info -0.51 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
120 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.51 >More info 0.40 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
121 Col-0 ozone 0.53 >More info 0.38 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
122 Salt Stress 24 h (root) 0.54 >More info 0.37 >More info Stress mock 24 h (root) Original data Stress treatments
123 col-5 DC3000 12h 0.56 >More info 0.34 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
124 WT Bc inoculation 14h 0.53 >More info 0.37 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
125 mpk6-ko Flg22 4h 0.38 >More info 0.52 >More info mpk6-ko H2O 4h Original data GEO bulk
126 oligomycin 1 h 0.40 >More info 0.50 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
127 Aerobic prt6 0.32 >More info 0.58 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
128 plant (Col-0) 4h OPDA 0.51 >More info 0.38 >More info plant (Col-0) 4h control Original data GEO bulk
129 cdkf:1-2 0.54 >More info 0.35 >More info wt seedling young seedlings Original data GEO bulk
130 etr1 1% sucrose 12-day-old 0.50 >More info 0.39 >More info Col-0 1% sucrose 12-day-old Original data GEO bulk
131 OPDA 4 h 0.51 >More info 0.38 >More info Col-0 Original data GEO bulk
132 gh3.5D uninoculated -0.50 >More info -0.39 >More info Col-0 48 hpi Original data GEO bulk
133 cat2-2; 8h switch to ambient CO2 concentrations; 0.39 >More info 0.50 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
134 CT101 ozone 0.53 >More info 0.35 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
135 mkk1/mkk2 control rep 0.51 >More info 0.37 >More info Col-0 Time 0 rep Original data GEO bulk
136 R. solani AG8 0.54 >More info 0.33 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
137 Col BTH 0.20 >More info 0.67 >More info Col rosettes Original data GEO bulk
138 GST-overexpression seedlings control 0.51 >More info 0.36 >More info WT seedlings control Seedlings Original data
139 chito-octamer 0.36 >More info 0.50 >More info Col Mock Original data GEO bulk
140 E.coli TUV86 2 fliC 7h 0.35 >More info 0.51 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
141 plant (tga2-5-6) 4h OPDA 0.50 >More info 0.35 >More info plant (tga2-5-6) 4h control Original data GEO bulk
142 Laer Flg22(Agrobacterium) 2h -0.35 >More info -0.50 >More info Laer Control leaf discs Original data GEO bulk
143 MPK6 ox Shoot Hypoxia 0.26 >More info 0.59 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
144 WT 1wk -P 0.57 >More info 0.27 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
145 Laer pretreat GA Flg22 1h 0.13 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
146 JA 3h 0.22 >More info 0.62 >More info EtOH 3h 3hr Original data GEO bulk
147 mil4 BTH 0.50 >More info 0.33 >More info Col BTH rosettes Original data GEO bulk
148 Laer pretreat JA Flg22 1h 0.51 >More info 0.31 >More info Laer pretreat water control leaf discs Original data GEO bulk
149 FarRed Light 45min -0.25 >More info -0.55 >More info White Light 45min Original data Light treatments
150 gun5 control 0.29 >More info 0.50 >More info Col-0 control Original data GEO bulk
151 mbd4 mutant thaliana 10-day-old seedling 0.52 >More info 0.26 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
152 opr3 OPDA 2 h 0.14 >More info 0.64 >More info opr3 0 h Original data GEO bulk
153 ABA 1 h 0.15 >More info 0.62 >More info Mock 1 h Original data Basic hormone treatment of seedlings
154 COL-0-Fe--shoot 0.26 >More info 0.51 >More info COL-0-Ctrl--shoot shoot Original data
155 long 14-degree- 0.21 >More info 0.54 >More info control long Original data GEO bulk
156 sav1-1 shade 0.25 >More info 0.50 >More info Col-0 shade seedlings Original data GEO bulk
157 siliques AtHb1 control 0.21 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
158 CLO 4mM 0.55 >More info 0.17 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
159 sfr6 cold -0.17 >More info -0.55 >More info WT cold All aerial tissue Original data GEO bulk
160 Red/FR Light45min -0.01 >More info 0.73 >More info FarRed Light 45min Original data Light treatments
161 MPK6 ox Root Hypoxia 0.20 >More info 0.50 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
162 WT 6H Cold 0.08 >More info 0.62 >More info WT control Original data GEO bulk
163 atmyc2 Seedling BL+ABA -0.52 >More info -0.17 >More info WT Seedling BL+ABA Original data GEO bulk
164 long 12-degree- 0.11 >More info 0.56 >More info control long Original data GEO bulk
165 60m light 0.13 >More info 0.54 >More info before light whole seedlings Original data GEO bulk
166 red illumination +lincomycin 0.16 >More info 0.51 >More info red illumination -lincomycin Original data GEO bulk
167 IAA7mII over-expressor IAA Treated -0.02 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
168 SA 4mM 0.53 >More info 0.13 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
169 Hypoxic e1 ate 0.11 >More info 0.53 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
170 sfr3 cold 0.52 >More info 0.11 >More info WT-cold aerial tissues Original data GEO bulk
171 Leaf wounded 0.09 >More info 0.54 >More info Leaf control vegetative leaf Original data GEO bulk
172 Col-0 24hpi A. brassicicola 0.58 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
173 2xX6x interploidy cross 0.07 >More info 0.51 >More info 2xX2x cross Original data GEO bulk
174 CCA1-ox 6am non-polysomal 0.07 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
175 seed germinating in countinuous light 24h SL -0.16 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
176 bri1-116 -0.24 >More info 0.73 >More info Col seedling Original data GEO bulk
177 HairpinZ 4 h (leaf) 0.51 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
178 P. infestans 6 h (leaf) 0.61 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
179 Col PSTDC3000 24h 0.57 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
180 Shoot apex inflorescence (after bolting) -0.23 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
181 ptpks2 -0.15 >More info 0.50 >More info Col-WT leaves Original data GEO bulk