4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on ga1-3 SCL3OE
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List of experiments correlated with "ga1-3 SCL3OE"  Help Download transcriptome of top 30
Score Experiment Correlation from
ga1-3 SCL3OE		 Correlation to
ga1-3 SCL3OE		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 ga1-3 SCL3OE 1.00 >More info 1.00 >More info ga1-3 whole root Original data
2 abi1 hypocotyl -0.48 >More info -0.71 >More info Ler hypocotyl hypocotyl Original data GEO bulk
3 seedling 1.5h after HZE atm-1 -0.62 >More info -0.56 >More info seedling day 1 unirradiated atm-1 1.5h Original data
4 Red Light 4 h -0.44 >More info -0.71 >More info White Light 4 h Original data Light treatments
5 myb61 xylem -0.34 >More info -0.77 >More info wt xylem xylem Original data GEO bulk
6 Red/FR Light 4 h -0.52 >More info -0.58 >More info FarRed Light 4 h Original data Light treatments
7 seedling 6h after HZE WT -0.54 >More info -0.53 >More info seedling day 1 unirradiated WT 6h Original data
8 Col(gl) 0mM NaCl -0.51 >More info -0.54 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
9 Col(gl) leaf 0mM NaCl -0.51 >More info -0.54 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
10 Dark 4 h pls UV-AB 5min 0.42 >More info 0.62 >More info Dark 4 h Original data Light treatments
11 OsRLCK253 expressing 0.46 >More info 0.57 >More info WT seedlings Original data GEO bulk
12 protoplasted roots pH4.6 -0.49 >More info -0.53 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
13 bHLH122 ox 0.42 >More info 0.60 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
14 seedling 1.5h after HZE WT -0.54 >More info -0.47 >More info seedling day 1 unirradiated WT 1.5h Original data
15 3x(p) -0.48 >More info -0.52 >More info 2x two week old seedlings Original data
16 oas-a1.1 root 0.36 >More info 0.63 >More info WT-Untreated Root Original data GEO bulk
17 1 h Light Total RNA 0.48 >More info 0.51 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
18 seedling 24h after Gamma atm-1 0.39 >More info 0.60 >More info seedling day 2 unirradiated atm-1 24h Original data
19 Light 4h steady-state 0.45 >More info 0.53 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
20 FarRed Light 4 h 0.39 >More info 0.58 >More info White Light 4 h Original data Light treatments
21 pip3 At2g19270 RNAi 24 0.44 >More info 0.53 >More info Nd-1 whole plant Original data GEO bulk
22 Root submergence 7h -0.43 >More info -0.54 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
23 bri1-116 0.24 >More info 0.73 >More info Col seedling Original data GEO bulk
24 4x -0.44 >More info -0.52 >More info 2x two week old seedlings Original data
25 WT Na2S 0.40 >More info 0.55 >More info WT water Na2S leaf Original data GEO bulk
26 Whole root - S 12H 0.58 >More info 0.37 >More info Whole root - S 0H Original data GEO bulk
27 2d dark-grown WT(Col-0)/1 hr red light 0.43 >More info 0.52 >More info 2d dark-grown WT seedling Original data GEO bulk
28 seedling 6h after HZE atm-1 -0.51 >More info -0.43 >More info seedling day 1 unirradiated atm-1 6h Original data
29 Ibuprofen 3 h 0.29 >More info 0.65 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
30 iron minus 6 h 0.37 >More info 0.57 >More info iron +6 h root Original data GEO bulk
31 Col leaf 100mM NaCl -0.41 >More info -0.53 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
32 Col leaf 100mM NaCl -0.41 >More info -0.53 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
33 Col 100mM NaCl -0.41 >More info -0.53 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
34 OsSAP11 expressing 0.41 >More info 0.53 >More info WT seedlings Original data GEO bulk
35 Light 4h polysome-bound 0.44 >More info 0.50 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
36 Atss3 Light1 0.43 >More info 0.50 >More info Atss3 Dark0.5 Original data GEO bulk
37 Night Time Treatment 0.39 >More info 0.52 >More info Night Time Control 1hr white light pulse aerial rosette Original data
38 Shoot dark control 7h -0.41 >More info -0.50 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
39 HARAP aerobic 0.33 >More info 0.58 >More info WT aerobic aerobic Original data GEO bulk
40 arr10 arr12 0.56 >More info 0.34 >More info DMSO--WT DMSO roots Original data GEO bulk
41 FLIGHT TAGESB plate6 ROOTS -0.39 >More info -0.51 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
42 Whole root - S 24H 0.52 >More info 0.37 >More info Whole root - S 0H Original data GEO bulk
43 cngc4 -0.37 >More info -0.52 >More info Ws-2 Seedlings Original data GEO bulk
44 AtLysM RLK1 mutant chitooctaose 0.38 >More info 0.50 >More info WT chitooctaose Original data GEO bulk
45 rrd1 IBA 0.33 >More info 0.54 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
46 seedling 12h after HZE WT -0.33 >More info -0.54 >More info seedling day 1 unirradiated WT 12h Original data
47 root longitudinal zone-4 low sulfur -0.35 >More info -0.52 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
48 35S:MYB28 like miR 0.26 >More info 0.61 >More info WT for miR Original data GEO bulk
49 35S:RPS4 eds1-2 2h 0.34 >More info 0.52 >More info 35S:RPS4 2h leaves Original data
50 6-trichlorophenoxyacetic acid 3 h 0.28 >More info 0.58 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
51 long 8-degree- 0.36 >More info 0.50 >More info control long Original data GEO bulk
52 Col-0 35S:MBS1 HL 3h 0.36 >More info 0.50 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
53 Mutant lwd1_lwd2 -0.32 >More info -0.53 >More info Wildtype for phy mutants Original data GEO bulk
54 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 -0.32 >More info -0.53 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
55 Cd 18h root 0.28 >More info 0.56 >More info WT-Untreated Root Original data GEO bulk
56 WT+chitooctaose -0.29 >More info -0.54 >More info WT+water chitooctaose seedlings Original data GEO bulk
57 Col-0 RNAi-MBS2/mbs1-1 HL 3h 0.31 >More info 0.52 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
58 mbd6 mutant thaliana 10-day-old seedling -0.51 >More info -0.31 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
59 hepta mutant (higher order mutant) -0.53 >More info -0.29 >More info col control (higher order mutant) Original data GEO bulk
60 Shoot apex inflorescence (after bolting) 0.17 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
61 Dark 44min pls RedLigh 1min 0.28 >More info 0.54 >More info Dark 45 min Original data Light treatments
62 GV3101 3hpi -0.28 >More info -0.54 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
63 root protoplasts 40 mM NaCl -0.27 >More info -0.55 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
64 4C 2h(SOIL) -0.22 >More info -0.60 >More info 4C 0h(SOIL) Original data GEO bulk
65 P-chlorophenoxy- isobutyric acid 3 h 0.31 >More info 0.50 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
66 Col ozone 3h -0.29 >More info -0.51 >More info Col clean-air 3h ozone Original data GEO bulk
67 seedling 24h after Gamma WT 0.27 >More info 0.53 >More info seedling day 2 unirradiated WT 24h Original data
68 ein2 mutant roots IAA 0.29 >More info 0.50 >More info roots ethylene Original data GEO bulk
69 toc1-1-89hr 0.26 >More info 0.52 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
70 shoot hypoxia p35S -0.21 >More info -0.57 >More info shoot hypoxia total Original data GEO bulk
71 xyl-grown cell culture- 1h 1mM Suc -0.09 >More info -0.68 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
72 seed germinating in countinuous light 24h SL 0.09 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
73 WT 3H Cold -0.21 >More info -0.54 >More info WT control Original data GEO bulk
74 35S:ATR1 like miR 0.23 >More info 0.52 >More info WT for miR Original data GEO bulk
75 Blue Light 4 h 0.21 >More info 0.53 >More info White Light 4 h Original data Light treatments
76 oas-a1.1 Cd 24h -0.20 >More info -0.54 >More info Cd 24h root Shoot Original data GEO bulk
77 root longitudinal zone-3 pH 4.6 0.22 >More info 0.51 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
78 myb61 cork -0.19 >More info -0.53 >More info wt cork cork Original data GEO bulk
79 4h decapitation 0.20 >More info 0.51 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
80 hsfa1 quadruple mutant -0.20 >More info -0.51 >More info WT (Col-0) whole seedling Original data GEO bulk
81 flu dark 8hours/30 minute light -0.19 >More info -0.51 >More info col dark 8hours/30 minute light Original data GEO bulk
82 ahg2-1sid2-2 0.20 >More info 0.50 >More info WT (Col) control Original data GEO bulk
83 short 14-degree- 0.13 >More info 0.56 >More info control short Original data GEO bulk
84 ex2 flu dark 8hours/30 minute light -0.16 >More info -0.52 >More info col dark 8hours/30 minute light Original data GEO bulk
85 opr3 JA 0.5 h -0.12 >More info -0.56 >More info opr3 0 h Original data GEO bulk
86 short 12-degree- 0.13 >More info 0.54 >More info control short Original data GEO bulk
87 IAA7mII over-expressor IAA Treated -0.03 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
88 FarRed Light 45min -0.13 >More info -0.51 >More info White Light 45min Original data Light treatments
89 P.syringae vir 4 h (leaf) -0.11 >More info -0.53 >More info Mock 4 h (leaf) Original data Elicitor treatments
90 35S-GSH1 4C 0.10 >More info 0.54 >More info Col-0 4C seeds Original data GEO bulk
91 ein2 mutant roots mock 0.06 >More info 0.57 >More info roots mock Original data GEO bulk
92 long 14-degree- 0.09 >More info 0.52 >More info control long Original data GEO bulk
93 ANAC102 knock-out -0.05 >More info -0.54 >More info Col-0 Original data GEO bulk
94 WT Red light 1h 0.09 >More info 0.50 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
95 seedling 3h after HZE WT -0.60 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
96 root longitudinal zone-1 -Fe -0.01 >More info 0.51 >More info root longitudinal zone-1 standard Original data GEO bulk
97 Col BTH -0.20 >More info 0.67 >More info Col rosettes Original data GEO bulk
98 CCA1-ox 6am non-polysomal -0.04 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
99 Chemically -0.03 >More info 0.50 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
100 sng1 -0.10 >More info 0.54 >More info WT aerial region Original data GEO bulk
101 Laer pretreat GA Flg22 1h -0.29 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
102 siliques AtHb1 control -0.13 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
103 Heat shock optimum -0.37 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
104 Col0-PsmES4326-24hpi -0.34 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
105 Leafminer damaged seedlings -0.46 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk