4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on 3m.KCl
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "3m.KCl"  Help Download transcriptome of top 30
Score Experiment Correlation from
3m.KCl		 Correlation to
3m.KCl		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 3m.KCl 1.00 >More info 1.00 >More info To. KCl 14 day old Roots Original data GEO bulk
2 6m.KCl 0.92 >More info 0.91 >More info To. KCl 14 day old Roots Original data GEO bulk
3 3m.KNO3 0.91 >More info 0.92 >More info To. KNO3 14 day old Roots Original data GEO bulk
4 6m.KNO3 0.91 >More info 0.91 >More info To. KNO3 14 day old Roots Original data GEO bulk
5 12m.KCl 0.73 >More info 0.76 >More info To. KCl 14 day old Roots Original data GEO bulk
6 2hr transitory KNO3 PeR cell 0.62 >More info 0.65 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
7 sfr3 cold 0.64 >More info 0.62 >More info WT-cold aerial tissues Original data GEO bulk
8 K starvation (root) 0.62 >More info 0.61 >More info Ws (root) Original data GEO bulk
9 cngc19 -0.75 >More info -0.48 >More info Col-0 root Original data GEO bulk
10 SAM SE agl15 agl18 double mutant 0.56 >More info 0.66 >More info SAM SE Col Original data GEO bulk
11 Root -K 0.62 >More info 0.60 >More info Control-root Original data GEO bulk
12 rrd2 IBA 0.57 >More info 0.64 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
13 OXUPB1-2 meristematic zone 0.62 >More info 0.58 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
14 2hr transitory KNO3 SR cell 0.60 >More info 0.60 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
15 NaCl scm -0.54 >More info -0.64 >More info NaCl Col Original data GEO bulk
16 -Sulfate 24 h 0.72 >More info 0.46 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
17 phr1 Shoot-Pi 0.53 >More info 0.64 >More info WT Root-Pi shoots Original data GEO bulk
18 iron minus 0 h 0.51 >More info 0.66 >More info iron +0 h root Original data GEO bulk
19 arp6-10 12 ºC -0.57 >More info -0.59 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
20 triplod male excess -0.52 >More info -0.62 >More info tetraploid Original data GEO bulk
21 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight 0.59 >More info 0.53 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
22 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark 0.60 >More info 0.51 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hMockDark 2 h mock dark seedling Original data
23 Prohexadione 3 h 0.48 >More info 0.63 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
24 15m.KNO3 0.52 >More info 0.57 >More info To. KNO3 14 day old Roots Original data GEO bulk
25 15m.KCl 0.40 >More info 0.69 >More info To. KCl 14 day old Roots Original data GEO bulk
26 Control KNO3 roots - 8hours 0.55 >More info 0.53 >More info Control KCl roots - 8hours 5mM KNO3 on both sides for 8 hours roots Original data GEO bulk
27 GA 120min 0.60 >More info 0.48 >More info CON120 GA 120 min. root tips Original data GEO bulk
28 Indigo Carmine 0.5 uM 0.44 >More info 0.63 >More info Control MV and IC Indigo Carmine Original data
29 afb3-1 2h KNO3 0.49 >More info 0.58 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
30 ara1/2mut -0.50 >More info -0.56 >More info Col-3 Original data GEO bulk
31 P.p 10.5hai 0.59 >More info 0.47 >More info At-Control roots Original data GEO bulk
32 NFA8 roots 2hr KNO3 nitrogen 0.59 >More info 0.47 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
33 phr1 phl1 Root-Pi -0.40 >More info -0.66 >More info WT Shoot+Pi roots Original data GEO bulk
34 root cells endodermis and quiescent center -Fe 0.60 >More info 0.45 >More info whole roots standard Original data GEO bulk
35 tbf1-mock spray 0.52 >More info 0.53 >More info WT-mock spray water for 6 hrs (spray) mature leaf Original data GEO bulk
36 bam7 untreated -0.37 >More info -0.68 >More info WT untreated none shoot Original data
37 vtc2 day 7 induction -0.48 >More info -0.57 >More info WT day 7 induction day 7 induction of somatic embryogenesis Original data GEO bulk
38 Osmotic Stress 24 h (root) 0.48 >More info 0.55 >More info Stress mock 24 h (root) Original data Stress treatments
39 agb1 gpa1 -ABA LF 0.41 >More info 0.62 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
40 atmyc2 Seedling Dark 0.47 >More info 0.56 >More info WT Seedling Dark Original data GEO bulk
41 Col-0 Root 100 mM ATP 30 min 0.44 >More info 0.59 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
42 nNOS-drought 0.53 >More info 0.49 >More info WT-drought leaf Original data
43 IAA7mII over-expressor IAA Treated 0.33 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
44 5-Triiodobenzoic acid3 h 0.47 >More info 0.54 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
45 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy		 0.57 >More info 0.43 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy		 2 h hypoxia +2' reoxy seedling Original data
46 P.p 30hai 0.56 >More info 0.44 >More info At-Control roots Original data GEO bulk
47 Roots Cd -0.41 >More info -0.59 >More info Roots control Cd Root Original data GEO bulk
48 Salt Stress 24 h (root) 0.40 >More info 0.59 >More info Stress mock 24 h (root) Original data Stress treatments
49 Dex-rga(delta17) 2h GA4 0.45 >More info 0.54 >More info Vector 4h GA4 shoots Original data GEO bulk
50 P.p 6hai 0.57 >More info 0.41 >More info At-Control roots Original data GEO bulk
51 afb3-1 2h KCl -0.43 >More info -0.55 >More info Ws 2h KCl 2 hours of 5 mM KCl Arabidopsis root Original data GEO bulk
52 epidermis control -0.38 >More info -0.60 >More info Control for tissue data mock epidermis Original data GEO bulk
53 intact root control -0.37 >More info -0.60 >More info Control for tissue data mock whole root Original data GEO bulk
54 root cortex 40 mM NaCl 0.56 >More info 0.40 >More info root cortex Original data GEO bulk
55 2h KNO3 Whole root -0.70 >More info -0.26 >More info 2h KCl control Whole root Whole root Original data GEO bulk
56 Whole root - low pH 12H 0.33 >More info 0.63 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
57 2hr KCl control SR cell 0.53 >More info 0.42 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
58 Ts5 roots 2hr KCl control 0.45 >More info 0.50 >More info Col0 roots 2hr KCl control root Original data GEO bulk
59 QC -0.37 >More info -0.58 >More info Control for tissue data FACS-sorted protoplasts from roots Original data
60 1h +Pi -0.51 >More info -0.43 >More info 1h -Pi root Original data GEO bulk
61 gapcp1gapcp2 ABA 0.35 >More info 0.59 >More info WT ABA ABA seedling Original data GEO bulk
62 Dex-rga(delta17) 4h GA4 0.44 >More info 0.50 >More info Vector 4h GA4 shoots Original data GEO bulk
63 bri1-116 0.20 >More info 0.73 >More info Col seedling Original data GEO bulk
64 Whole root - low pH 3H 0.35 >More info 0.58 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
65 Cold Stress 24 h (root) 0.52 >More info 0.40 >More info Stress mock 24 h (root) Original data Stress treatments
66 hira-root -0.40 >More info -0.52 >More info WT-root root Original data
67 WT-16ºC -0.42 >More info -0.50 >More info WT-23ºC Original data GEO bulk
68 2hr transitory KNO3 EPR cell 0.37 >More info 0.54 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
69 arp6-10 2h 27 -degree-C -0.52 >More info -0.38 >More info Col-0 2h at 27 ºC whole seedlings Original data GEO bulk
70 roots bhlh100/101 100uM Fe -0.40 >More info -0.50 >More info roots WT 100uM Fe 100uM Fe roots Original data GEO bulk
71 Phytoprostane A1 4 h 0.38 >More info 0.51 >More info Col-0 Original data GEO bulk
72 dark +lincomycin 0.35 >More info 0.54 >More info dark -lincomycin Original data GEO bulk
73 pericycle control -0.34 >More info -0.54 >More info Control for tissue data mock pericycle Original data GEO bulk
74 Red/FR Light45min -0.27 >More info -0.61 >More info FarRed Light 45min Original data Light treatments
75 Nicotinamide-77hr 0.51 >More info 0.36 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
76 sng1 -0.36 >More info -0.51 >More info WT aerial region Original data GEO bulk
77 oxt6:AtCPSF30 line -0.52 >More info -0.34 >More info oxt6 mutant Original data GEO bulk
78 agb1 -ABA LF 0.36 >More info 0.50 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
79 fri-flc -0.57 >More info -0.29 >More info WT Original data GEO bulk
80 dorn1-1 Root 100 mM ATP 30 min -0.32 >More info -0.53 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
81 Prohexadione 12 h 0.50 >More info 0.35 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
82 SQ8 roots 2hr KCl control 0.56 >More info 0.28 >More info Col0 roots 2hr KCl control root Original data GEO bulk
83 Mature roots -0.30 >More info -0.54 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
84 dark +H2O2 -0.34 >More info -0.50 >More info dark 5 mM H2O2 seedling Original data GEO bulk
85 HRE1-RNAi20 normoxia -0.51 >More info -0.32 >More info Col upon normoxia normoxia seedling roots Original data GEO bulk
86 bHLH122 ox -0.26 >More info -0.57 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
87 2hr continuous KNO3 LRCR cell 0.51 >More info 0.31 >More info 2hr KCl control LRCR cell Lateral Root Cap root cells Original data GEO bulk
88 sfr6 drought -0.20 >More info -0.62 >More info WT drought All aerial tissue Original data GEO bulk
89 Got7 UV 0.24 >More info 0.58 >More info Got7 mock UV seedling Original data
90 9m.KCl 0.22 >More info 0.60 >More info To. KCl 14 day old Roots Original data GEO bulk
91 Whole root - low pH 6H 0.20 >More info 0.61 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
92 Uniconazole 3 h -0.19 >More info -0.60 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
93 Laer pretreat GA Flg22 1h 0.07 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
94 non-polysome mRNA eif3k -0.25 >More info -0.53 >More info non-polysome mRNA WT aerial part Original data GEO bulk
95 Callus -0.28 >More info -0.50 >More info Control for tissue data callus Original data GEO bulk
96 cop1 Seedling Dark 0.26 >More info 0.51 >More info WT Seedling Dark Original data GEO bulk
97 Cocultivation 8 hrs root 0.26 >More info 0.51 >More info Mock cocultivation 8 hrs root Root Original data
98 cngc1-3 -0.66 >More info -0.10 >More info Col-0 root Original data GEO bulk
99 Col-0 HS 0.24 >More info 0.52 >More info Col-0 control heat shocked seedling Original data GEO bulk
100 WT (Col-0) heat shock 0.24 >More info 0.52 >More info WT (Col-0) whole seedling Original data GEO bulk
101 opr3 OPDA 0.5 h -0.20 >More info -0.56 >More info opr3 0 h Original data GEO bulk
102 seed germinating in countinuous light 48 h SL -0.23 >More info -0.52 >More info Control for tissue data seed Original data GEO bulk
103 phosphate-starved 0.25 >More info 0.50 >More info control shoot tissue Original data GEO bulk
104 NAA +AA 0.18 >More info 0.56 >More info NAA -AA B5 media supplemented with 4.5 µM NAA and treated with AA Original data
105 CsUBC13-OE-es 0.52 >More info 0.21 >More info Col-es root Original data GEO bulk
106 oas-a1.1 Cd 18h 0.23 >More info 0.50 >More info Cd 18h root Root Original data GEO bulk
107 rcf1-1 cold 24h 0.20 >More info 0.53 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
108 Full C2 T2 0.22 >More info 0.51 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
109 chito-octamer 0.50 >More info 0.22 >More info Col Mock Original data GEO bulk
110 Brz220 12 h 0.18 >More info 0.52 >More info Mock 12 h Original data Effect of brassinosteroid inhibitors on seedlings
111 G3P -0.10 >More info -0.60 >More info Mock distal leaves Original data GEO bulk
112 Section Root from70 mm to 340 mm harvested
immediately		 -0.15 >More info -0.54 >More info Control for tissue data Original data GEO bulk
113 Root from tip to 130 mm proximal to tip (cut
8dpg)		 -0.12 >More info -0.56 >More info Control for tissue data Original data GEO bulk
114 6h +Pi -0.17 >More info -0.50 >More info 6h -Pi root Original data GEO bulk
115 AGL24 induced 0.15 >More info 0.52 >More info WT-ESTRADIOL Original data GEO bulk
116 Regenerating Stump Root Tip Cut 130 mm andn Recut
13 hrs Taking 70 mm of Stump (4dpg)		 -0.11 >More info -0.56 >More info Control for tissue data Original data GEO bulk
117 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (8 dpg)		 -0.12 >More info -0.55 >More info Control for tissue data Original data GEO bulk
118 Hydrogen Peroxide 500 uM -0.53 >More info -0.13 >More info Control RB and PER Hydrogen Peroxide Original data
119 Paclobutrazol 3 h -0.05 >More info -0.61 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
120 Col-0 low oxygen 0.14 >More info 0.50 >More info Col-0 control low oxygen root Original data GEO bulk
121 Regenerating Stump Root Tip Cut 130 mm andn Recut
5 hrs Taking 70 mm of Stump (4dpg)		 -0.10 >More info -0.54 >More info Control for tissue data Original data GEO bulk
122 Leafminer damaged seedlings 0.07 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
123 chl1-5 Nitrate 0.5h 0.11 >More info 0.52 >More info WT Nitrate 0.5h Original data GEO bulk
124 vte2 leaves 0h LT 0.07 >More info 0.54 >More info Col leaves 0h LT h 9-11th adult leaves Original data
125 Col0-PsmES4326-24hpi 0.00 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
126 Root from tip to 130 mm proximal to tip (cut
4dpg)		 -0.07 >More info -0.53 >More info Control for tissue data Original data GEO bulk
127 Light 0.5h steady-state -0.09 >More info -0.50 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
128 IPT8 mutant tZ 24h -0.52 >More info -0.06 >More info Control 24h 24 hours primary root tip (5 mm) Original data GEO bulk
129 Regenerating Stump Root Tip Cut 130 mm andn Recut
22 hrs Taking 70 mm of Stump (4dpg)		 -0.05 >More info -0.53 >More info Control for tissue data Original data GEO bulk
130 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (4dpg)		 0.00 >More info -0.54 >More info Control for tissue data Original data GEO bulk
131 Shoot apex inflorescence (after bolting) -0.12 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
132 abh1 -ABA -0.01 >More info -0.51 >More info Col-0 -ABA Original data GEO bulk
133 Col BTH -0.16 >More info 0.67 >More info Col rosettes Original data GEO bulk
134 CCA1-ox 6am non-polysomal 0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
135 vtc1-1 -0.04 >More info 0.54 >More info Col-0 whole plant Original data GEO bulk
136 Light 0.5h polysome-bound 0.12 >More info -0.55 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
137 seed germinating in countinuous light 24h SL -0.24 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
138 SA 4mM -0.15 >More info 0.52 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
139 FarRed Light 45min -0.22 >More info 0.58 >More info White Light 45min Original data Light treatments
140 Heat shock optimum -0.31 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
141 siliques AtHb1 control -0.26 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk