4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on rdr1-1
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List of experiments correlated with "rdr1-1"  Help Download transcriptome of top 30
Score Experiment Correlation from
rdr1-1		 Correlation to
rdr1-1		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 rdr1-1 1.00 >More info 1.00 >More info Col-0 Original data GEO bulk
2 rdr2-1 0.89 >More info 0.79 >More info Col-0 Original data GEO bulk
3 dcl2-1 0.86 >More info 0.77 >More info Col-0 Original data GEO bulk
4 dcl3-1 0.84 >More info 0.76 >More info Col-0 Original data GEO bulk
5 Mutant lwd1_lwd2 -0.63 >More info -0.77 >More info Wildtype for phy mutants Original data GEO bulk
6 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 -0.63 >More info -0.77 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
7 Atss3 Light1 0.65 >More info 0.72 >More info Atss3 Dark0.5 Original data GEO bulk
8 WT Na2S 0.61 >More info 0.70 >More info WT water Na2S leaf Original data GEO bulk
9 Col(gl) 0mM NaCl -0.63 >More info -0.66 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
10 Col(gl) leaf 0mM NaCl -0.63 >More info -0.66 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
11 WT (Col-0) inflorescence moderate drought day 5 0.60 >More info 0.68 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
12 OsRLCK253 expressing 0.57 >More info 0.70 >More info WT seedlings Original data GEO bulk
13 Col leaf 100mM NaCl -0.51 >More info -0.70 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
14 Col leaf 100mM NaCl -0.51 >More info -0.70 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
15 Col 100mM NaCl -0.51 >More info -0.70 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
16 SOS1 0mM NaCl -0.61 >More info -0.59 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
17 pip3 At2g19270 RNAi 24 0.55 >More info 0.64 >More info Nd-1 whole plant Original data GEO bulk
18 M6PR transgenic leaf 0mM NaCl -0.57 >More info -0.62 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
19 dde2-2 24hpi A. brassicicola 0.46 >More info 0.68 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
20 des1 water 0.59 >More info 0.52 >More info WT water water leaf Original data GEO bulk
21 WT 3H Cold -0.23 >More info -0.86 >More info WT control Original data GEO bulk
22 pip3 At2g19270 RNAi 32 0.48 >More info 0.60 >More info Nd-1 whole plant Original data GEO bulk
23 shoot-10 μM DEX- 12 hr -0.45 >More info -0.62 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
24 Atss3 Light4 0.49 >More info 0.58 >More info Atss3 Dark0.5 Original data GEO bulk
25 FLIGHT TAGESB plate6 ROOTS -0.36 >More info -0.71 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
26 seedling 6h after HZE WT -0.52 >More info -0.54 >More info seedling day 1 unirradiated WT 6h Original data
27 vtc2 (I) -0.51 >More info -0.55 >More info Col (I) rosette Original data GEO bulk
28 toc1-1-73hr -0.57 >More info -0.49 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
29 WT (Col-0) inflorescence well-watered day 5 0.53 >More info 0.52 >More info WT (Col-0) inflorescence well-watered day 0 Unopen flower buds Original data GEO bulk
30 Night Time Treatment 0.55 >More info 0.50 >More info Night Time Control 1hr white light pulse aerial rosette Original data
31 E.orontii Infection 3 day -0.42 >More info -0.63 >More info Uninfection 3 day Original data Elicitor treatments
32 M6PR transgenic 0mM NaCl -0.52 >More info -0.52 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
33 opr3 JA 0.5 h -0.40 >More info -0.64 >More info opr3 0 h Original data GEO bulk
34 ein2-1 24hpi A. brassicicola 0.43 >More info 0.61 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
35 abi1 hypocotyl -0.38 >More info -0.65 >More info Ler hypocotyl hypocotyl Original data GEO bulk
36 shoot-10 μM DEX- 6 hr -0.46 >More info -0.57 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
37 20h Col-0 -0.35 >More info -0.67 >More info 00h Col-0 Original data GEO bulk
38 24h volatiles Sm. R3089 -0.41 >More info -0.61 >More info 24h untreated whole seedling Original data GEO bulk
39 sid2-2 24hpi A. brassicicola 0.44 >More info 0.58 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
40 toc1-1-77hr -0.41 >More info -0.60 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
41 OsSAP11 expressing 0.37 >More info 0.64 >More info WT seedlings Original data GEO bulk
42 Dry late day 0.41 >More info 0.59 >More info Wet late day water-limited whole rosette Original data GEO bulk
43 3x(m) -0.39 >More info -0.61 >More info 2x two week old seedlings Original data
44 long 10-degree- 0.45 >More info 0.54 >More info control long Original data GEO bulk
45 WT (Col-0) inflorescence well-watered day 4 0.47 >More info 0.52 >More info WT (Col-0) inflorescence well-watered day 0 Unopen flower buds Original data GEO bulk
46 16h Col-0 -0.36 >More info -0.62 >More info 00h Col-0 Original data GEO bulk
47 seedling 12h after HZE atm-1 -0.37 >More info -0.61 >More info seedling day 1 unirradiated atm-1 12h Original data
48 seedling 12h after HZE WT -0.40 >More info -0.58 >More info seedling day 1 unirradiated WT 12h Original data
49 CBF3 0mM NaCl -0.53 >More info -0.44 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
50 hen1 0.57 >More info 0.40 >More info Ler Original data GEO bulk
51 abi4 vtc2 (I) -0.42 >More info -0.55 >More info Col (I) rosette Original data GEO bulk
52 60m light 0.39 >More info 0.57 >More info before light whole seedlings Original data GEO bulk
53 cca1-lhy 60m light -0.35 >More info -0.60 >More info 60m light whole seedlings Original data GEO bulk
54 8 hr nitrate -0.50 >More info -0.44 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
55 8 hr ammonium -0.42 >More info -0.51 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
56 lht1 untreated 0.54 >More info 0.38 >More info WT untreated untreated leaf Original data GEO bulk
57 abi4-102 (I) -0.40 >More info -0.52 >More info Col (I) rosette Original data GEO bulk
58 shl-2 Pool -0.41 >More info -0.51 >More info Ler Pool seedling Original data GEO bulk
59 vte1-1 3d vernalization 0.55 >More info 0.36 >More info WT 3d vernalization Original data GEO bulk
60 cca1-lhy 30m light -0.36 >More info -0.55 >More info 30m light whole seedlings Original data GEO bulk
61 2hr transitory KNO3 PrR cell -0.17 >More info -0.74 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
62 Dark 6h ivd -0.50 >More info -0.40 >More info 0h ivd Original data
63 myb61 xylem -0.23 >More info -0.67 >More info wt xylem xylem Original data GEO bulk
64 Inflorescences Trp1 -0.26 >More info -0.64 >More info Inflorescences ler inflorescences Original data GEO bulk
65 seedling 1.5h after HZE WT -0.57 >More info -0.33 >More info seedling day 1 unirradiated WT 1.5h Original data
66 opr3 OPDA 0.5 h -0.33 >More info -0.54 >More info opr3 0 h Original data GEO bulk
67 WT (Col-0) inflorescence well-watered day 3 0.50 >More info 0.37 >More info WT (Col-0) inflorescence well-watered day 0 Unopen flower buds Original data GEO bulk
68 Dark 6h hml -0.52 >More info -0.34 >More info 0h hml Original data
69 Cd 18h root 0.36 >More info 0.50 >More info WT-Untreated Root Original data GEO bulk
70 Dry pre-dawn 0.23 >More info 0.63 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
71 08h Col-0 -0.36 >More info -0.50 >More info 00h Col-0 Original data GEO bulk
72 Leafminer systemically damaged thaliana seedlings -0.33 >More info -0.52 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
73 seedling 12h after Gamma atm-1 -0.29 >More info -0.56 >More info seedling day 1 unirradiated atm-1 12h Original data
74 cca1-lhy before light -0.30 >More info -0.54 >More info before light whole seedlings Original data GEO bulk
75 30m light 0.28 >More info 0.56 >More info before light whole seedlings Original data GEO bulk
76 anti-sense for AtAOX1a -0.25 >More info -0.59 >More info WT Original data GEO bulk
77 Dry midday 0.28 >More info 0.55 >More info Wet midday water-limited whole rosette Original data GEO bulk
78 root stele -S -0.27 >More info -0.56 >More info root stele pH5.7 Original data GEO bulk
79 red illumination +lincomycin -0.27 >More info -0.56 >More info red illumination -lincomycin Original data GEO bulk
80 TaFLS overexpression line (OE1) -0.27 >More info -0.56 >More info Col-0 Rosette leaves Original data
81 oas-a1.1 Cd 24h -0.14 >More info -0.69 >More info Cd 24h root Shoot Original data GEO bulk
82 aba1 hypocotyl -0.21 >More info -0.62 >More info Ler hypocotyl hypocotyl Original data GEO bulk
83 35S:RPS4 eds1-2 2h 0.23 >More info 0.60 >More info 35S:RPS4 2h leaves Original data
84 2hr continuous KNO3 and MSX and Gln PeR cell -0.32 >More info -0.50 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
85 seedling 1.5h after HZE atm-1 -0.55 >More info -0.26 >More info seedling day 1 unirradiated atm-1 1.5h Original data
86 ERF96OE -0.50 >More info -0.31 >More info WT leaf Original data
87 1 h Light Total RNA 0.27 >More info 0.54 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
88 4C 1h -0.07 >More info -0.74 >More info 4C 0h Original data GEO bulk
89 IAA7mII over-expressor IAA Treated 0.10 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
90 toc1-1-89hr 0.28 >More info 0.50 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
91 toc1-1-93hr -0.23 >More info -0.54 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
92 shoot-10 μM DEX- 24hr -0.20 >More info -0.57 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
93 hepta mutant (higher order mutant) -0.50 >More info -0.26 >More info col control (higher order mutant) Original data GEO bulk
94 1 h Light IP RNA 0.26 >More info 0.50 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
95 gun1-9 control 0.21 >More info 0.53 >More info Col-0 control Original data GEO bulk
96 2hr continuous KCl and MSX control PeR cell 0.20 >More info 0.53 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
97 WT 30μM phosphate 8 hours. -0.20 >More info -0.52 >More info WT control (not supplemented). Original data
98 stn7-1 -0.16 >More info -0.54 >More info Col-0 rosette leaves Original data GEO bulk
99 21h-DC3000 avrRpm1 -0.20 >More info -0.50 >More info 21h-DC3000 leaves Original data GEO bulk
100 MYB12OX -0.16 >More info -0.53 >More info Col-0 aerial part Original data
101 Dark 3day hml -0.50 >More info -0.19 >More info 0h hml Original data
102 Infected pft1 leaf -0.06 >More info -0.63 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
103 dor control 0.51 >More info 0.17 >More info WT control Original data GEO bulk
104 Dark 1day ivd -0.50 >More info -0.18 >More info 0h ivd Original data
105 Protoplast Induced -0.07 >More info -0.61 >More info Uninduced Original data GEO bulk
106 Laer Flg22(Agrobacterium) 2h -0.10 >More info -0.58 >More info Laer Control leaf discs Original data GEO bulk
107 Col0-PsmES4326-24hpi 0.07 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
108 WT 6H Cold -0.17 >More info -0.50 >More info WT control Original data GEO bulk
109 4C 2h(SOIL) -0.04 >More info -0.63 >More info 4C 0h(SOIL) Original data GEO bulk
110 Rsch 8h -0.12 >More info -0.55 >More info Rsch CA Leaves Original data
111 rosette Light Wounded -0.10 >More info -0.57 >More info rosette Light Control Original data GEO bulk
112 35S:VND7-VP16-GR+CHX 0.11 >More info 0.55 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
113 Laer pretreat GA Flg22 1h -0.06 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
114 root epidermis and lateral root cap -S -0.10 >More info -0.54 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
115 rosettes atx drought 0.11 >More info 0.52 >More info rosettes atx watered Original data GEO bulk
116 atm3 0.12 >More info 0.51 >More info Col0 whole plant Original data GEO bulk
117 myb61 cork -0.10 >More info -0.52 >More info wt cork cork Original data GEO bulk
118 ABA SA 24h 0.07 >More info 0.53 >More info EtOH 24h 24hr Original data GEO bulk
119 npr1 sni1 brca2a SA 0.07 >More info 0.52 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
120 ex1 flu dark 8hours/30 minute light 0.00 >More info -0.57 >More info col dark 8hours/30 minute light Original data GEO bulk
121 Blue Light 45 min 0.08 >More info -0.63 >More info White Light 45min Original data Light treatments
122 Col BTH -0.12 >More info 0.67 >More info Col rosettes Original data GEO bulk
123 seed germinating in countinuous light 24h SL -0.15 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
124 Col 8h 0.02 >More info -0.53 >More info Col CA Leaves Original data
125 seedling 3h after HZE WT -0.52 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
126 ex2 flu dark 8hours/30 minute light 0.05 >More info -0.55 >More info col dark 8hours/30 minute light Original data GEO bulk
127 CCA14 dark late 0.00 >More info 0.50 >More info Col dark late Original data GEO bulk
128 Atwrky63 -0.07 >More info 0.57 >More info Col0 none leaf Original data GEO bulk
129 CCA1-ox 6am non-polysomal -0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
130 Selenate (root) 0.09 >More info -0.55 >More info Ws (root) Original data GEO bulk
131 Root Selenate 0.09 >More info -0.55 >More info Root control 40 micromolar selenate Root Original data GEO bulk
132 TNT-seedlings 0.11 >More info -0.52 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
133 CDB1-Knockout -0.22 >More info 0.62 >More info WT Original data GEO bulk
134 rosette Dark Wounded 0.17 >More info -0.57 >More info rosette Dark Control Original data GEO bulk
135 Leaf wounded 0.26 >More info -0.62 >More info Leaf control vegetative leaf Original data GEO bulk
136 Shoot apex inflorescence (after bolting) -0.33 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
137 bri1-116 -0.43 >More info 0.73 >More info Col seedling Original data GEO bulk
138 phyB mutant 16C 10hrs 0.54 >More info -0.26 >More info 16C 10h whole plant excluding roots Original data GEO bulk
139 Heat shock optimum -0.40 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
140 Leafminer damaged seedlings -0.33 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
141 siliques AtHb1 control -0.46 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk