4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on AtGATA2ox
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "AtGATA2ox"  Help Download transcriptome of top 30
Score Experiment Correlation from
AtGATA2ox		 Correlation to
AtGATA2ox		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 AtGATA2ox 1.00 >More info 1.00 >More info Col seedling Original data GEO bulk
2 bri1-116 0.63 >More info 0.73 >More info Col seedling Original data GEO bulk
3 etiolated cop1BBX22-GFPox 0.61 >More info 0.61 >More info etiolated Col-0 whole seedlings Original data GEO bulk
4 phyB Dark 0.53 >More info 0.58 >More info WT(Ler) Dark Original data GEO bulk
5 Nicotinamide-85hr 0.53 >More info 0.57 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
6 phyAphyB Dark -0.50 >More info -0.57 >More info phyB Dark Original data GEO bulk
7 sav1-1 light 0.48 >More info 0.58 >More info Col-0 light seedlings Original data GEO bulk
8 WT Rc50 0.49 >More info 0.56 >More info WT Dark red light whole seedling Original data GEO bulk
9 WT(Ler) Rc50 0.49 >More info 0.56 >More info WT(Ler) Dark Original data GEO bulk
10 csn5 (csn5a-2 csn5b) dark 0.51 >More info 0.52 >More info WT dark Original data GEO bulk
11 inhibitor A Treated 0.32 >More info 0.71 >More info Negative Control Original data GEO bulk
12 csn4-1 mutant 0.49 >More info 0.53 >More info WT dark Original data GEO bulk
13 CabpBVR2 -0.51 >More info -0.50 >More info WT Original data GEO bulk
14 CMP 4hr 0.43 >More info 0.58 >More info Acetone 4hr root Original data GEO bulk
15 (Col-0)+200 uM As 0.45 >More info 0.56 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
16 Selenate (root) 0.44 >More info 0.56 >More info Ws (root) Original data GEO bulk
17 Col-0 low oxygen 0.44 >More info 0.56 >More info Col-0 control low oxygen root Original data GEO bulk
18 CMV-A2b mutant 0.40 >More info 0.60 >More info Mock-At Aerial tissues Original data GEO bulk
19 Root Selenate 0.44 >More info 0.56 >More info Root control 40 micromolar selenate Root Original data GEO bulk
20 WT 2-4h Xanthomonas 0.39 >More info 0.60 >More info WT T0 Original data GEO bulk
21 Cycloheximide 3 h 0.47 >More info 0.51 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
22 Infected pft1 leaf 0.31 >More info 0.67 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
23 P.p 2.5hai 0.44 >More info 0.53 >More info At-Control roots Original data GEO bulk
24 9 hr Hypoxia 1 hr recovery Total RNA 0.44 >More info 0.53 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
25 WT+H2O2 0.41 >More info 0.55 >More info WT H2O2 Original data GEO bulk
26 Nicotinamide-73hr 0.50 >More info 0.45 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
27 toc1-1-57hr 0.42 >More info 0.53 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
28 5-Triiodobenzoic acid3 h 0.39 >More info 0.55 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
29 P.p 6hai 0.52 >More info 0.42 >More info At-Control roots Original data GEO bulk
30 4C 1h 0.34 >More info 0.60 >More info 4C 0h Original data GEO bulk
31 (Col-0)+100 uM As 0.42 >More info 0.50 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
32 root cells epidermis and lateral root cap -Fe 0.37 >More info 0.54 >More info whole roots standard Original data GEO bulk
33 Mutant sav3-2 (WL) 0.29 >More info 0.62 >More info Col-0 (WL) Original data GEO bulk
34 sav3-2 light 0.29 >More info 0.62 >More info Col-0 light seedlings Original data GEO bulk
35 gun1gun5 far-red pretreated -0.27 >More info -0.63 >More info WT far-red pretreated Original data GEO bulk
36 cop1 Seedling BL 0.33 >More info 0.56 >More info WT Seedling BL Original data GEO bulk
37 Col0-PsmES4326-24hpi 0.28 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
38 abi1 hypocotyl 0.26 >More info 0.63 >More info Ler hypocotyl hypocotyl Original data GEO bulk
39 flu 0.33 >More info 0.55 >More info WT Col Original data GEO bulk
40 root longitudinal zone-4 pH 4.6 0.32 >More info 0.56 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
41 ceh1 mutant 0.34 >More info 0.54 >More info Parent line Original data
42 Heat and anoxia 0.31 >More info 0.56 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
43 Heat 0.37 >More info 0.50 >More info Control 90 minutes at 38°C. Original data GEO bulk
44 Laer pretreat GA Flg22 1h 0.16 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
45 myb3 myb3r4d 0.26 >More info 0.61 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
46 phyABDE Dark 0.33 >More info 0.53 >More info WT Dark Dark whole seedling Original data GEO bulk
47 Leafminer damaged seedlings 0.30 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
48 IAA7mII over-expressor IAA Treated 0.17 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
49 Ws HS 0.27 >More info 0.59 >More info Ws control heat shocked seedling Original data GEO bulk
50 Nicotinamide-77hr 0.50 >More info 0.35 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
51 ckh2 CK0 0.34 >More info 0.50 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
52 sid2-1 cold -0.33 >More info -0.51 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
53 Col BTH 0.17 >More info 0.67 >More info Col rosettes Original data GEO bulk
54 flu over-tAPX 0.31 >More info 0.52 >More info WT Col Original data GEO bulk
55 dicamba 0.33 >More info 0.50 >More info WT mock whole seedling Original data GEO bulk
56 safener treated 0.31 >More info 0.52 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
57 WT seedlings MV 0.32 >More info 0.51 >More info WT seedlings control Seedlings Original data GEO bulk
58 Anoxia 0.21 >More info 0.62 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
59 bio4-1 mutant watered00µM biotin leaves -0.27 >More info -0.54 >More info bio4-1 mutant leaves leaves Original data GEO bulk
60 Col-0 SA 0.29 >More info 0.52 >More info Col-0 Original data GEO bulk
61 atsf1-2 mutant seedling 0.27 >More info 0.54 >More info Col-0 seedling seedlings Original data
62 35S:RPS4 eds1-2 2h -0.28 >More info -0.53 >More info 35S:RPS4 2h leaves Original data
63 root protoplasts 40 mM NaCl 0.23 >More info 0.58 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
64 rsa3-1 Na 24h 0.16 >More info 0.64 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
65 WT 90-105 min Xanthomonas 0.24 >More info 0.56 >More info WT T0 Original data GEO bulk
66 smg7b-1 0.23 >More info 0.55 >More info WT whole plant Original data GEO bulk
67 Col-0 HS 0.20 >More info 0.57 >More info Col-0 control heat shocked seedling Original data GEO bulk
68 WT (Col-0) heat shock 0.20 >More info 0.57 >More info WT (Col-0) whole seedling Original data GEO bulk
69 atmyc2 Seedling BL -0.24 >More info -0.53 >More info WT Seedling BL Original data GEO bulk
70 IAA/inhibitor A Treated 0.23 >More info 0.53 >More info IAA Treated Original data GEO bulk
71 35S::PI ap3-3 35S::AP-GR +DEX 0.14 >More info 0.62 >More info 0hr DEX Original data GEO bulk
72 SA 4mM 0.20 >More info 0.52 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
73 Heat shock optimum 0.06 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
74 root - 08% oxygen - 2h 0.10 >More info 0.60 >More info root - 21% oxygen - 2h Original data GEO bulk
75 siliques AtHb1 control 0.18 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
76 Rose Bengal 0.5 uM 0.10 >More info 0.59 >More info Control RB and PER Rose Bengal Original data
77 WT 3H Cold 0.12 >More info 0.56 >More info WT control Original data GEO bulk
78 pGL3::GL3-GR Dex 4 hours -0.09 >More info -0.59 >More info pGL3::GL3-GR mock 4 hours Original data GEO bulk
79 Full C2 T2 0.10 >More info 0.55 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
80 etiolated cop1 0.59 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
81 Protoplast Induced 0.10 >More info 0.53 >More info Uninduced Original data GEO bulk
82 NJ15 0.05 >More info 0.58 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
83 seed germinating in countinuous light 24h SL -0.05 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
84 Light 0.5h steady-state 0.10 >More info 0.51 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
85 chl1-5 Nitrate 0.5h 0.01 >More info 0.60 >More info WT Nitrate 0.5h Original data GEO bulk
86 cat2-2; 8h switch to ambient CO2 concentrations; 0.11 >More info 0.50 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
87 Shoot apex inflorescence (after bolting) -0.07 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
88 agb1 gpa1 +ABA LF -0.03 >More info -0.53 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
89 vte2-1 1d vernalization -0.02 >More info 0.54 >More info WT 1d vernalization Original data GEO bulk
90 FarRed Light 45min -0.01 >More info -0.50 >More info White Light 45min Original data Light treatments
91 root - 04% oxygen - 2h -0.01 >More info 0.52 >More info root - 21% oxygen - 2h Original data GEO bulk
92 CCA1-ox 6am non-polysomal -0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data