4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on piffq FR 3h
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List of experiments correlated with "piffq FR 3h"  Help Download transcriptome of top 30
Score Experiment Correlation from
piffq FR 3h		 Correlation to
piffq FR 3h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 piffq FR 3h 1.00 >More info 1.00 >More info WT FR 3h whole seedling Original data GEO bulk
2 piffq FR 1h 0.78 >More info 0.90 >More info WT FR 1h whole seedling Original data GEO bulk
3 pif4pif5 mut 24h FR 0.68 >More info 0.80 >More info WT 24h FR Original data GEO bulk
4 Light 4h polysome-bound 0.67 >More info 0.65 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
5 piffq 2d WL 0.45 >More info 0.85 >More info WT 2d WL whole seedling Original data GEO bulk
6 Light 4h steady-state 0.64 >More info 0.65 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
7 Col-0 low R/FR -0.58 >More info -0.69 >More info Col-0 high R/FR low R/FR seedlings Original data GEO bulk
8 piffq 3d WL 0.47 >More info 0.78 >More info WT 3d WL whole seedling Original data GEO bulk
9 Shoot dark control 7h -0.60 >More info -0.62 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
10 Shoot dark control 24h -0.59 >More info -0.62 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
11 piffq FR 24h 0.56 >More info 0.61 >More info WT FR 24h whole seedling Original data GEO bulk
12 low R/FR JA spray -0.55 >More info -0.60 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
13 aerial organ callus inducing medium 12 h -0.61 >More info -0.52 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
14 WT hypoxia -0.56 >More info -0.57 >More info WT normoxia whole rosette Original data
15 low R/FR mock spray -0.52 >More info -0.60 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
16 Shoot submergence 24h -0.54 >More info -0.58 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
17 seedling 1.5h after HZE atm-1 -0.51 >More info -0.60 >More info seedling day 1 unirradiated atm-1 1.5h Original data
18 WT(Ler) Rc50 0.63 >More info 0.46 >More info WT(Ler) Dark Original data GEO bulk
19 low CO2 + dark -0.47 >More info -0.61 >More info normal CO2 + light Original data GEO bulk
20 WT(Ler) Rc15 0.63 >More info 0.43 >More info WT(Ler) Dark Original data GEO bulk
21 CCA14 dark late -0.56 >More info -0.48 >More info Col dark late Original data GEO bulk
22 WT Rc50 0.62 >More info 0.42 >More info WT Dark red light whole seedling Original data GEO bulk
23 WT Red light 1h 0.45 >More info 0.59 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
24 seedling 1.5h after HZE WT -0.51 >More info -0.52 >More info seedling day 1 unirradiated WT 1.5h Original data
25 pif4pif5 mut 1h FR 0.45 >More info 0.57 >More info WT 1h FR Original data GEO bulk
26 aerial organ callus inducing medium 24h -0.57 >More info -0.43 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
27 2d dark-grown WT(Col-0)/1 hr red light 0.48 >More info 0.52 >More info 2d dark-grown WT seedling Original data GEO bulk
28 pif4pif5 mut dark 0.27 >More info 0.70 >More info WT dark Original data GEO bulk
29 pif5 high R/FR 0.41 >More info 0.56 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
30 Dark 6h ivd -0.54 >More info -0.41 >More info 0h ivd Original data
31 aerial organ callus inducing medium 48 h -0.52 >More info -0.42 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
32 pif4pif5 high R/FR 0.42 >More info 0.52 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
33 phyAphyB Dark -0.51 >More info -0.42 >More info phyB Dark Original data GEO bulk
34 Dark 44min pls RedLigh 1min 0.36 >More info 0.57 >More info Dark 45 min Original data Light treatments
35 WT Red light 18h 0.54 >More info 0.38 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
36 pab polysome 0.35 >More info 0.57 >More info WT polysome seedling shoot/aerial seedling Original data
37 etiolated cop1BBX22-GFPox 0.50 >More info 0.41 >More info etiolated Col-0 whole seedlings Original data GEO bulk
38 Col-0 DCA 6d -0.53 >More info -0.37 >More info Col-0 MOCK 6d Original data GEO bulk
39 Dark 6h hml -0.55 >More info -0.35 >More info 0h hml Original data
40 Dark 6h wt -0.55 >More info -0.35 >More info 0h wt Original data
41 Dark 40 min pls UV-A 5 min 0.36 >More info 0.54 >More info Dark 45 min Original data Light treatments
42 4h decapitation 0.31 >More info 0.59 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
43 cop1 Seedling BL+ABA 0.39 >More info 0.50 >More info WT Seedling BL+ABA Original data GEO bulk
44 Dark 1day wt -0.54 >More info -0.34 >More info 0h wt Original data
45 Day Time Treatment 0.38 >More info 0.50 >More info Day Time Control 1hr white light pulse aerial rosette Original data
46 Dark 1day hml -0.50 >More info -0.36 >More info 0h hml Original data
47 Mutant iaa5_6_19 0.24 >More info 0.62 >More info Col Original data GEO bulk
48 Dark 1day ivd -0.50 >More info -0.35 >More info 0h ivd Original data
49 high-R:FR bud axillary 0.35 >More info 0.50 >More info low-R:FR bud axillary high R rosette axillary bud n-2 Original data GEO bulk
50 FarRed Light 45min -0.23 >More info -0.60 >More info White Light 45min Original data Light treatments
51 Red Light 4 h -0.31 >More info -0.50 >More info White Light 4 h Original data Light treatments
52 Polysomal RNA 35S:HF-RPL18 0.08 >More info 0.73 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
53 IAA7mII over-expressor IAA Treated 0.11 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
54 seed germinating in countinuous light 24h SL 0.12 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
55 rrd1 IBA 0.26 >More info 0.53 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
56 ABA 1 h -0.27 >More info -0.50 >More info Mock 1 h Original data Basic hormone treatment of seedlings
57 TNT-seedlings -0.11 >More info -0.65 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
58 ACN1-2 -0.22 >More info -0.54 >More info col-7 Original data GEO bulk
59 root longitudinal zone-3 pH 4.6 -0.13 >More info -0.62 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
60 triploid female excess 0.16 >More info 0.59 >More info tetraploid Original data GEO bulk
61 root - 08% oxygen - 48h 0.23 >More info 0.51 >More info root - 21% oxygen - 48h Original data GEO bulk
62 low CO2 + light -0.21 >More info -0.53 >More info normal CO2 + light Original data GEO bulk
63 Shoot apex inflorescence (after bolting) 0.05 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
64 Col BTH 0.03 >More info 0.67 >More info Col rosettes Original data GEO bulk
65 PNO8 12 h -0.18 >More info -0.52 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
66 WT (Col) glucose 0.17 >More info 0.52 >More info WT (Col) glucose seedlings Original data GEO bulk
67 root - 08% oxygen - 2h 0.09 >More info 0.60 >More info root - 21% oxygen - 2h Original data GEO bulk
68 root - 04% oxygen - 48h 0.06 >More info 0.63 >More info root - 21% oxygen - 48h Original data GEO bulk
69 Col-0 0h NAA -0.19 >More info -0.50 >More info Col-0 6h MOCK Original data GEO bulk
70 oas-a1.1 root 0.14 >More info 0.54 >More info WT-Untreated Root Original data GEO bulk
71 toc1-1-73hr -0.12 >More info -0.55 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
72 ACN1-2 Sucrose -0.03 >More info -0.64 >More info Col-7 Sucrose Original data GEO bulk
73 Chemically -0.14 >More info -0.53 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
74 upb1-1 elongation zone 0.12 >More info 0.54 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
75 Laer pretreat GA Flg22 1h -0.05 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
76 gun1-1 +lincomycin 0.15 >More info 0.50 >More info Col-0 +lincomycin Original data GEO bulk
77 bri1-116 -0.13 >More info 0.73 >More info Col seedling Original data GEO bulk
78 siliques AtHb1 control 0.05 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
79 ABA control -0.10 >More info 0.67 >More info No ABA control Original data GEO bulk
80 Shoot submergence 7h -0.53 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
81 35S:RPS4 eds1-2 T0 0.02 >More info -0.55 >More info 35S:RPS4 T0 leaves Original data
82 myb61 xylem 0.01 >More info -0.53 >More info wt xylem xylem Original data GEO bulk
83 seedling 3h after HZE WT -0.53 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
84 FarRed Light 4 h 0.01 >More info 0.50 >More info White Light 4 h Original data Light treatments
85 CCA1-ox 6am non-polysomal 0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
86 Heat shock optimum -0.17 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
87 Col0-PsmES4326-24hpi -0.19 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
88 Light 3day hml 0.12 >More info -0.52 >More info 0h hml Original data
89 CeO2 germinant -0.18 >More info 0.54 >More info Millipore Water germinant CeO2 seedling Original data
90 Leafminer damaged seedlings -0.23 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
91 light 0.50 >More info -0.18 >More info dark light seedling Original data GEO bulk