4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root longitudinal zone-4 pH 4.6
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List of experiments correlated with "root longitudinal zone-4 pH 4.6"  Help Download transcriptome of top 30
Score Experiment Correlation from
root longitudinal zone-4 pH 4.6		 Correlation to
root longitudinal zone-4 pH 4.6		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root longitudinal zone-4 pH 4.6 1.00 >More info 1.00 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
2 Whole root - low pH 24H 0.77 >More info 0.62 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
3 WT roots - Fe 0.53 >More info 0.76 >More info WT roots + Fe Roots Original data GEO bulk
4 Whole root - low pH 12H 0.70 >More info 0.54 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
5 whole roots -Fe 72 hour 0.61 >More info 0.55 >More info whole roots standard Original data GEO bulk
6 Fe starvation 72 h 0.61 >More info 0.55 >More info Control Original data GEO bulk
7 bri1-116 0.42 >More info 0.73 >More info Col seedling Original data GEO bulk
8 AgNO3 3 h 0.59 >More info 0.53 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
9 Cycloheximide 3 h 0.68 >More info 0.43 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
10 Tsu -Fe 24h Roots 0.58 >More info 0.51 >More info Tsu +Fe 24h Roots Original data GEO bulk
11 Tsu-1 -Fe 24h 0.58 >More info 0.51 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
12 bak1-3 +Pep2 2h 0.59 >More info 0.49 >More info WT +Pep2 2h Pep2 Original data GEO bulk
13 root cortex pH4.6 0.57 >More info 0.51 >More info root cortex pH5.7 Original data GEO bulk
14 whole roots -Fe 48 hour 0.55 >More info 0.52 >More info whole roots standard Original data GEO bulk
15 SA 0.59 >More info 0.48 >More info WT mock Whole seedling Original data GEO bulk
16 5-Triiodobenzoic acid3 h 0.60 >More info 0.47 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
17 Chemically 0.48 >More info 0.59 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
18 9 hr Hypoxia 1 hr recovery Total RNA 0.54 >More info 0.51 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
19 P.p 30hai 0.65 >More info 0.40 >More info At-Control roots Original data GEO bulk
20 toc1-1-53hr 0.56 >More info 0.49 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
21 hni9 high nitrogen 0.62 >More info 0.42 >More info WT high nitrogen roots Original data GEO bulk
22 R. solani AG8 0.60 >More info 0.43 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
23 1h +Pi -0.48 >More info -0.55 >More info 1h -Pi root Original data GEO bulk
24 Col upon hypoxia 6 hrs 0.53 >More info 0.49 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
25 cdpk6-yfp 0.54 >More info 0.47 >More info Kan seedlings Original data GEO bulk
26 Col BTH 0.34 >More info 0.67 >More info Col rosettes Original data GEO bulk
27 hira-root -0.62 >More info -0.38 >More info WT-root root Original data
28 ahg2-1sid2-2 0.44 >More info 0.56 >More info WT (Col) control Original data GEO bulk
29 toc1-1-69hr 0.49 >More info 0.51 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
30 BLM+INA 0.67 >More info 0.32 >More info CK BLM and INA seedling Original data
31 bak1-3 untreated 0.36 >More info 0.63 >More info WT untreated untreated Original data GEO bulk
32 35:SUB1C -0.52 >More info -0.46 >More info WT whole seedling Original data GEO bulk
33 Col-0 6h NAA 0.55 >More info 0.43 >More info Col-0 6h MOCK Original data GEO bulk
34 slr-1 0h NAA 0.38 >More info 0.60 >More info Col-0 0h NAA Original data GEO bulk
35 toc1-1-73hr 0.53 >More info 0.44 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
36 WT 30μM arsenate 8 hours. 0.63 >More info 0.34 >More info WT control (not supplemented). Original data
37 toc1-1-57hr 0.62 >More info 0.34 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
38 toc1-1-85hr 0.54 >More info 0.41 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
39 Selenate (root) 0.50 >More info 0.44 >More info Ws (root) Original data GEO bulk
40 Root Selenate 0.50 >More info 0.44 >More info Root control 40 micromolar selenate Root Original data GEO bulk
41 TNT-seedlings 0.36 >More info 0.58 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
42 upb1-1 elongation zone -0.42 >More info -0.52 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
43 dicamba 0.54 >More info 0.39 >More info WT mock whole seedling Original data GEO bulk
44 BLM 0.60 >More info 0.32 >More info CK BLM seedling Original data
45 phyB Rc50 0.57 >More info 0.35 >More info WT(Ler) Rc50 Original data GEO bulk
46 NAA 6h 0.53 >More info 0.38 >More info before treatment NAA root Original data GEO bulk
47 toc1-1-49hr 0.63 >More info 0.28 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
48 P.p 10.5hai 0.53 >More info 0.38 >More info At-Control roots Original data GEO bulk
49 Col-0 wt Hypoxic 0.54 >More info 0.36 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
50 WT-16ºC -0.55 >More info -0.35 >More info WT-23ºC Original data GEO bulk
51 P.p 2.5hai 0.54 >More info 0.35 >More info At-Control roots Original data GEO bulk
52 9 hr Hypoxia Total RNA 0.52 >More info 0.37 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
53 seedlings + TSA 0.52 >More info 0.37 >More info control seedlings 10-day old whole seedling Original data GEO bulk
54 Cocultivation 8 hrs root 0.61 >More info 0.28 >More info Mock cocultivation 8 hrs root Root Original data
55 root cells columella root cap -Fe 0.58 >More info 0.31 >More info whole roots standard Original data GEO bulk
56 AtGATA2ox 0.56 >More info 0.32 >More info Col seedling Original data GEO bulk
57 toc1-1-81hr 0.56 >More info 0.32 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
58 bbx24 in Simulated Shade -0.53 >More info -0.35 >More info WT in simulated shade shade seedling Original data
59 seedlings +5AC 0.60 >More info 0.28 >More info control seedlings 10-day old whole seedling Original data GEO bulk
60 seedlings-week-old RECA1-overexpressing
transgenic		 0.50 >More info 0.38 >More info seedlings-week-old Col-0 seedlings Original data
61 Mutant axr3-1 (IAA) 0.36 >More info 0.52 >More info Col (IAA) Original data GEO bulk
62 nia1nia2noa1-2 0.58 >More info 0.30 >More info Col-0 whole seedlings Original data GEO bulk
63 inhibitor B Treated 0.56 >More info 0.31 >More info Negative Control Original data GEO bulk
64 root cells epidermis and lateral root cap -Fe 0.56 >More info 0.31 >More info whole roots standard Original data GEO bulk
65 OXUPB1-2 meristematic zone 0.52 >More info 0.35 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
66 Salicylic Acid 3 h 0.35 >More info 0.52 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
67 S14-150 0.35 >More info 0.52 >More info wt Original data GEO bulk
68 AtMYB30-as 90-105 min Xanthomonas 0.23 >More info 0.64 >More info WT 90-105 min Xanthomonas Original data GEO bulk
69 Col-0 Root 100 mM ATP 30 min 0.55 >More info 0.31 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
70 IAA/inhibitor B Treated 0.51 >More info 0.35 >More info IAA Treated Original data GEO bulk
71 Col0-PsmES4326-24hpi 0.25 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
72 P.p 6hai 0.57 >More info 0.29 >More info At-Control roots Original data GEO bulk
73 toc1-1-65hr 0.56 >More info 0.29 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
74 root longitudinal zone-3 pH 4.6 0.29 >More info 0.56 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
75 GR-REV 60min 0.51 >More info 0.32 >More info Col 60min Original data GEO bulk
76 ARR22-ox (t-zeatin 3 h) 0.52 >More info 0.31 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
77 Whole root - low pH 3H 0.31 >More info 0.52 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
78 WT chitooctaose 0.50 >More info 0.32 >More info WT water Original data GEO bulk
79 toc1-1-61hr 0.63 >More info 0.19 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
80 Heat shock optimum 0.17 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
81 toc1-1-77hr 0.52 >More info 0.28 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
82 cngc19 -0.50 >More info -0.30 >More info Col-0 root Original data GEO bulk
83 Laer pretreat GA Flg22 1h 0.09 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
84 bak1-3 +Pep2 10h 0.54 >More info 0.25 >More info WT +Pep2 10h Pep2 Original data GEO bulk
85 Leafminer damaged seedlings 0.22 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
86 Col-0 37C 0.54 >More info 0.22 >More info Col-0 22C Original data GEO bulk
87 root longitudinal zone-4 -Fe 0.16 >More info 0.60 >More info root longitudinal zone-4 standard Original data GEO bulk
88 Protoplast Induced 0.26 >More info 0.50 >More info Uninduced Original data GEO bulk
89 phyABDE 4-day dark- 2 hours Rc50 -0.08 >More info -0.68 >More info phyABDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
90 atmyc2 cop1 Seedling Dark 0.51 >More info 0.23 >More info WT Seedling Dark Original data GEO bulk
91 whole roots 140 mM NaCl 1 hour 0.59 >More info 0.15 >More info whole roots standard Original data GEO bulk
92 GA4 3 h (ga1 seed) 0.51 >More info 0.22 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
93 siliques AtHb1 control 0.20 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
94 pepr1-1 Pepr2-3 +Pep2 10h -0.53 >More info -0.18 >More info WT +Pep2 10h Pep2 Original data GEO bulk
95 csn4-1 mutant 0.51 >More info 0.20 >More info WT dark Original data GEO bulk
96 naxillin 6h -0.58 >More info -0.12 >More info before treatment naxillin root Original data GEO bulk
97 whole roots 140 mM NaCl 30 minutes 0.58 >More info 0.11 >More info whole roots standard Original data GEO bulk
98 arr-dmso-sample 0.50 >More info 0.17 >More info Wt-dmso-sample seedling Original data
99 phr1 Shoot-Pi 0.50 >More info 0.16 >More info WT Root-Pi shoots Original data GEO bulk
100 seed germinating in countinuous light 24h SL -0.04 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
101 AGL24 induced -0.13 >More info -0.50 >More info WT-ESTRADIOL Original data GEO bulk
102 cngc4 0.50 >More info 0.12 >More info Ws-2 Seedlings Original data GEO bulk
103 root longitudinal zone-3 -Fe 0.00 >More info 0.62 >More info root longitudinal zone-3 standard Original data GEO bulk
104 IAA7mII over-expressor IAA Treated -0.09 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
105 Shoot apex inflorescence (after bolting) -0.06 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
106 CCA1-ox 6am non-polysomal -0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data