4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on pepr1-1 Pepr2-3 untreated
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "pepr1-1 Pepr2-3 untreated"  Help Download transcriptome of top 30
Score Experiment Correlation from
pepr1-1 Pepr2-3 untreated		 Correlation to
pepr1-1 Pepr2-3 untreated		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 pepr1-1 Pepr2-3 untreated 1.00 >More info 1.00 >More info WT untreated untreated Original data GEO bulk
2 bak1-3 untreated 0.71 >More info 0.76 >More info WT untreated untreated Original data GEO bulk
3 efr-1 untreated 0.61 >More info 0.76 >More info WT untreated untreated Original data GEO bulk
4 root - 01% oxygen - 48h 0.63 >More info 0.69 >More info root - 21% oxygen - 48h Original data GEO bulk
5 root - 08% oxygen - 30min 0.59 >More info 0.70 >More info root - 21% oxygen - 30min Original data GEO bulk
6 root - 04% oxygen - 2h 0.50 >More info 0.79 >More info root - 21% oxygen - 2h Original data GEO bulk
7 root - 04% oxygen - 48h 0.57 >More info 0.70 >More info root - 21% oxygen - 48h Original data GEO bulk
8 WT Shoot Hypoxia 0.66 >More info 0.57 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
9 Aerobic e1 ate2 0.62 >More info 0.61 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
10 shoot hypoxia total 0.59 >More info 0.57 >More info shoot control total Original data GEO bulk
11 Mutant iaa5_6_19 0.47 >More info 0.69 >More info Col Original data GEO bulk
12 root - 08% oxygen - 2h 0.45 >More info 0.68 >More info root - 21% oxygen - 2h Original data GEO bulk
13 ein2-1 untreated 0.60 >More info 0.53 >More info WT untreated untreated Original data GEO bulk
14 Dark 0.65 >More info 0.44 >More info Control Original data GEO bulk
15 Aerobic prt6 0.55 >More info 0.54 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
16 MPK6 ox Shoot Hypoxia 0.50 >More info 0.59 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
17 root - 01% oxygen - 2h 0.47 >More info 0.61 >More info root - 21% oxygen - 2h Original data GEO bulk
18 root - 04% oxygen - 30min 0.42 >More info 0.62 >More info root - 21% oxygen - 30min Original data GEO bulk
19 cys-c1 leaf -0.70 >More info -0.33 >More info Leaf-WT leaves Original data GEO bulk
20 MPK6 ox Root Hypoxia 0.47 >More info 0.56 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
21 bri1-116 0.29 >More info 0.73 >More info Col seedling Original data GEO bulk
22 Col-0 wt Hypoxic 0.56 >More info 0.45 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
23 scl3 0.76 >More info 0.25 >More info Col-0 whole root Original data GEO bulk
24 elf3-7-16ºC 0.33 >More info 0.68 >More info WT-16ºC Original data GEO bulk
25 35S:PCO1 hypoxia -0.47 >More info -0.54 >More info WT hypoxia whole rosette Original data
26 gun1-9 control 0.51 >More info 0.49 >More info Col-0 control Original data GEO bulk
27 Whole root - S 3H 0.39 >More info 0.61 >More info Whole root - S 0H Original data GEO bulk
28 cop1 Seedling BL+ABA 0.47 >More info 0.53 >More info WT Seedling BL+ABA Original data GEO bulk
29 Mutant iaa17-6 (IAA) 0.54 >More info 0.45 >More info Col (IAA) Original data GEO bulk
30 PNO8 12 h -0.41 >More info -0.58 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
31 mdh -0.49 >More info -0.50 >More info Col Original data GEO bulk
32 3x(m) -0.28 >More info -0.71 >More info 2x two week old seedlings Original data
33 Genotoxic Stress 3 h (root) -0.68 >More info -0.30 >More info Stress mock 3 h (root) Original data Stress treatments
34 Propiconazole 3 h 0.59 >More info 0.39 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
35 root - 01% oxygen - 30min 0.45 >More info 0.53 >More info root - 21% oxygen - 30min Original data GEO bulk
36 IBM1 knockout -0.58 >More info -0.39 >More info WT Original data GEO bulk
37 Tsu-1 -Fe 48h 0.57 >More info 0.40 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
38 Tsu -Fe 48h Roots 0.57 >More info 0.40 >More info Tsu +Fe 24h Roots Original data GEO bulk
39 3x(p) -0.37 >More info -0.60 >More info 2x two week old seedlings Original data
40 Cocultivation 8 hrs leaf -0.42 >More info -0.54 >More info Mock cocultivation 8 hrs leaf Leaf Original data
41 Col-7 Sucrose 0.51 >More info 0.44 >More info col-7 Original data GEO bulk
42 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.44 >More info 0.51 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
43 pip3 At2g19270 TDNA 9 -0.38 >More info -0.56 >More info Col-0 whole plant Original data GEO bulk
44 Mutant nph4-1_arf19-1 0.44 >More info 0.50 >More info Col Original data GEO bulk
45 OE-HRA1 2HS  -0.59 >More info -0.34 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
46 20m.KCl -0.51 >More info -0.42 >More info To. KCl 14 day old Roots Original data GEO bulk
47 Stem tissue 5 days NAA 0.50 >More info 0.43 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
48 rao2 H2O2 3h -0.58 >More info -0.35 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
49 COL-0-Fe--shoot 0.36 >More info 0.57 >More info COL-0-Ctrl--shoot shoot Original data
50 Mutant iaa5_6_19(IAA) 0.58 >More info 0.34 >More info Col (IAA) Original data GEO bulk
51 35S:LOB-GR mock 0.37 >More info 0.53 >More info Col mock mock seedling Original data GEO bulk
52 ga1-3/brm-1 0.59 >More info 0.30 >More info wt shoots Original data GEO bulk
53 Mutant cry1 -0.55 >More info -0.33 >More info Col-0 Original data GEO bulk
54 cry1 low light -0.55 >More info -0.33 >More info Col-O low light Original data GEO bulk
55 siliques AtHb1 control 0.35 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
56 Whole root - S 12H 0.30 >More info 0.56 >More info Whole root - S 0H Original data GEO bulk
57 agb1 -ABA GC -0.59 >More info -0.27 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
58 msg2-BR 0.60 >More info 0.26 >More info BR BR dark-grown seedlings Original data GEO bulk
59 GA3 3 h (ga1) -0.57 >More info -0.29 >More info Mock 3 h (ga1) Original data Basic hormone treatment of seedlings
60 csn5 (csn5a-2 csn5b) light 0.55 >More info 0.30 >More info WT light Original data GEO bulk
61 swn-7 -0.55 >More info -0.30 >More info Col whole plant Original data GEO bulk
62 RRE2 Chitin 0.57 >More info 0.28 >More info Chitin Original data GEO bulk
63 etr1 1% sucrose 12-day-old 0.63 >More info 0.22 >More info Col-0 1% sucrose 12-day-old Original data GEO bulk
64 Paclobutrazol 12 h -0.50 >More info -0.34 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
65 gun5 control 0.56 >More info 0.27 >More info Col-0 control Original data GEO bulk
66 seed germinating in countinuous light 24h SL 0.16 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
67 csn4-1 mutant 0.57 >More info 0.26 >More info WT dark Original data GEO bulk
68 Seedling KUA1-IOX est 0.32 >More info 0.50 >More info Seedling KUA1-IOX mock Original data
69 tetraploid -0.21 >More info -0.61 >More info diploid Original data GEO bulk
70 albino Ds13-2198-1 -0.55 >More info -0.26 >More info control Original data GEO bulk
71 L2.5 mutant -0.50 >More info -0.30 >More info Wt Original data GEO bulk
72 Mutant iaa17-6 0.22 >More info 0.58 >More info Col Original data GEO bulk
73 csn3-1 dark 0.56 >More info 0.23 >More info WT dark Original data GEO bulk
74 Col BTH 0.12 >More info 0.67 >More info Col rosettes Original data GEO bulk
75 24h volatiles Sp. HRO-C48 -0.60 >More info -0.18 >More info 24h untreated whole seedling Original data GEO bulk
76 B.cinerea 18 h infection 0.18 >More info 0.60 >More info Mock 18 h Original data Botrytis cinerea infection
77 Botrytis cinerea 18h 0.18 >More info 0.60 >More info control 18h Original data GEO bulk
78 csn5 (csn5a-2 csn5b) dark 0.57 >More info 0.21 >More info WT dark Original data GEO bulk
79 triplod male excess 0.57 >More info 0.21 >More info tetraploid Original data GEO bulk
80 axr2 0.57 >More info 0.20 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
81 roots bhlh100/101 0uM Fe -0.52 >More info -0.25 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
82 tumour 0.54 >More info 0.23 >More info non-tumor tumour Original data GEO bulk
83 WT 3H Cold -0.55 >More info -0.21 >More info WT control Original data GEO bulk
84 phr1 Root-Pi -0.53 >More info -0.21 >More info WT Root+Pi roots Original data GEO bulk
85 msg2 0.73 >More info 0.01 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
86 Bay-0-3h IAA -0.51 >More info -0.22 >More info Bay-0-0h IAA whole plant Original data GEO bulk
87 lec2-1 8 DAF Seed 0.51 >More info 0.22 >More info WT (WS) 8 DAF Seed developing seeds dissected from sliques Original data
88 clf-28 -0.54 >More info -0.18 >More info Col whole plant Original data GEO bulk
89 24h +Pi -0.51 >More info -0.21 >More info 24h -Pi root Original data GEO bulk
90 OXUPB1-2 elongation zone 0.58 >More info 0.14 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
91 C58 35dpi 0.60 >More info 0.12 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
92 Shoot apex inflorescence (after bolting) 0.07 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
93 Inflorescence miR-NGA 0.57 >More info 0.14 >More info Inflorescence wt Original data GEO bulk
94 rsl4 -0.51 >More info -0.19 >More info Col-0 Control root Original data GEO bulk
95 Col upon hypoxia 6 hrs 0.57 >More info 0.12 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
96 QK HS 0.50 >More info 0.19 >More info QK control heat shocked seedling Original data GEO bulk
97 aux1 mutant roots air -0.56 >More info -0.12 >More info roots IAA Original data GEO bulk
98 shoot control pGL2 0.52 >More info 0.16 >More info shoot control total Original data GEO bulk
99 WT roots - Fe -0.08 >More info 0.76 >More info WT roots + Fe Roots Original data GEO bulk
100 ape2 high light -0.17 >More info -0.51 >More info Ws-2 high light Original data GEO bulk
101 Mutant ap1-15(shoot apex) 0.61 >More info 0.07 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
102 siliques WT hypoxia 0.66 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
103 long 12-degree- 0.16 >More info 0.51 >More info control long Original data GEO bulk
104 35S::PI ap3-3 35S::AP-GR +DEX 0.05 >More info 0.62 >More info 0hr DEX Original data GEO bulk
105 seedling 24h after Gamma atm-1 0.16 >More info 0.51 >More info seedling day 2 unirradiated atm-1 24h Original data
106 grf1/grf2/grf3 0.53 >More info 0.13 >More info WS Original data GEO bulk
107 WT (Col) glucose 0.16 >More info 0.50 >More info WT (Col) glucose seedlings Original data GEO bulk
108 gun1gun5 Norflurazon 0.73 >More info -0.08 >More info Norflurazon a herbicide (Norflurazon) seedling Original data GEO bulk
109 ckh1 CK0 0.50 >More info 0.14 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
110 SCR-GR Time 12H Dex 0.52 >More info 0.12 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
111 9 hr Hypoxia 1 hr recovery Total RNA 0.50 >More info 0.14 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
112 mutant-line348 0.52 >More info 0.12 >More info WT-control whole plant Original data GEO bulk
113 Elevated CO2 AMPLE N NIGHT 0.07 >More info 0.56 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
114 root longitudinal zone-2 -Fe 0.01 >More info 0.62 >More info root longitudinal zone-2 standard Original data GEO bulk
115 30m light 0.11 >More info 0.52 >More info before light whole seedlings Original data GEO bulk
116 35S:RPS4 eds1-2 T0 0.55 >More info 0.07 >More info 35S:RPS4 T0 leaves Original data
117 axr2-BR 0.53 >More info 0.09 >More info BR BR dark-grown seedlings Original data GEO bulk
118 arp6-10 2h 27 -degree-C 0.50 >More info 0.11 >More info Col-0 2h at 27 ºC whole seedlings Original data GEO bulk
119 root longitudinal zone-4 -Fe 0.08 >More info 0.53 >More info root longitudinal zone-4 standard Original data GEO bulk
120 IPT8 induced 24h 0.50 >More info 0.10 >More info Control 24h 24 hours primary root tip (5 mm) Original data GEO bulk
121 ptpks2 0.03 >More info 0.56 >More info Col-WT leaves Original data GEO bulk
122 WT (Ler) CK200 0.64 >More info -0.05 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
123 GV3101 6dpi 0.50 >More info 0.07 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
124 3d old, both 10mM sucrose and 0.2µM SMX 0.07 >More info 0.50 >More info control Whole seedling Original data GEO bulk
125 Col-0 Root 100 mM ATP 30 min 0.62 >More info -0.06 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
126 IAA7mII over-expressor mock -0.53 >More info -0.03 >More info empty vector mock Original data GEO bulk
127 sav1-1 shade 0.51 >More info 0.05 >More info Col-0 shade seedlings Original data GEO bulk
128 Heat shock optimum -0.09 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
129 cngc1 -0.55 >More info 0.00 >More info Ws-2 Seedlings Original data GEO bulk
130 Nuclear GSH1 -0.50 >More info -0.05 >More info Cytoplasmic GSH1 Control Original data GEO bulk
131 Col0-PsmES4326-24hpi -0.06 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
132 oas-a1.1 root -0.07 >More info 0.62 >More info WT-Untreated Root Original data GEO bulk
133 Leafminer damaged seedlings -0.01 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
134 35S::CBF2 0.50 >More info 0.02 >More info Ws2 Original data GEO bulk
135 shoots bhlh100/101 100uM Fe 0.52 >More info -0.01 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
136 AhNAS2-RNAi Control -0.50 >More info -0.01 >More info WT Control Root Original data GEO bulk
137 Heat 2 days recovery -0.54 >More info 0.04 >More info Mock 2 days recovery seedling Original data GEO bulk
138 Laer pretreat GA Flg22 1h -0.21 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
139 OsTOP6B ox 0.51 >More info -0.02 >More info WT Original data GEO bulk
140 TA induced 0.50 >More info -0.01 >More info Methanol TA Suspension cells Original data GEO bulk
141 Mutant axr3-1 (IAA) 0.54 >More info -0.06 >More info Col (IAA) Original data GEO bulk
142 plant (tga2-5-6) 4h control -0.58 >More info 0.10 >More info plant (Col-0) 4h control Original data GEO bulk
143 Mutant tga2_5_6 -0.58 >More info 0.10 >More info Col-0 Original data GEO bulk
144 embryo proper linear-cotyledon 0.52 >More info -0.05 >More info whole seeds linear-cotyledon Original data GEO bulk
145 C24-3h IAA -0.53 >More info 0.06 >More info C24-0h IAA whole plant Original data GEO bulk
146 1.5 hr nitrate 0.54 >More info -0.08 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
147 WT Root-Pi -0.51 >More info 0.06 >More info WT Root+Pi roots Original data GEO bulk
148 CCA1-ox 6am non-polysomal -0.07 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
149 opr3 OPDA 2 h -0.15 >More info 0.56 >More info opr3 0 h Original data GEO bulk
150 myb3 myb3r4d -0.51 >More info 0.11 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
151 CLO 4mM -0.17 >More info 0.57 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
152 atr mock 0.51 >More info -0.12 >More info WT mock shoot apical meristem Original data
153 Elevated CO2 leaf primordia 0.58 >More info -0.20 >More info Ambient CO2 leaf primordia leaf primordia Original data
154 per1 in Pi deficiency medium 0.58 >More info -0.23 >More info Col in Pi deficiency medium root Original data GEO bulk
155 IAA7mII over-expressor IAA Treated -0.41 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
156 TNT-seedlings 0.45 >More info -0.64 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
157 iron minus 24h -0.50 >More info 0.37 >More info iron +24h root Original data GEO bulk