4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on tumour
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List of experiments correlated with "tumour"  Help Download transcriptome of top 30
Score Experiment Correlation from
tumour		 Correlation to
tumour		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 tumour 1.00 >More info 1.00 >More info non-tumor tumour Original data GEO bulk
2 C58 35dpi 0.96 >More info 0.95 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
3 Stem tissue 5 days NAA 0.67 >More info 0.70 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
4 Cambium 5 days NAA 0.66 >More info 0.71 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
5 aerial organ callus inducing medium 96 h 0.70 >More info 0.64 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
6 Differentiation 48h 0.68 >More info 0.61 >More info Differentiation 0h leaves Original data
7 Polysomal RNA 35S:AtCSP1-FH1 0.60 >More info 0.68 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
8 Col-0 low oxygen 0.69 >More info 0.59 >More info Col-0 Original data GEO bulk
9 Differentiation 36h 0.65 >More info 0.61 >More info Differentiation 0h leaves Original data
10 myb50 cork 0.62 >More info 0.62 >More info wt cork cork Original data GEO bulk
11 Laer pretreat GA Flg22 1h 0.51 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
12 myb50 xylem 0.63 >More info 0.54 >More info wt xylem xylem Original data GEO bulk
13 mkk1 control rep 0.60 >More info 0.56 >More info Col-0 Time 0 rep Original data GEO bulk
14 aerial organ callus inducing medium 12 h 0.61 >More info 0.54 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
15 WT Seedling BL -0.55 >More info -0.60 >More info WT Seedling Dark Original data GEO bulk
16 aerial organ callus inducing medium 48 h 0.59 >More info 0.55 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
17 nas4x leaves + Fe 0.49 >More info 0.64 >More info WT leaves + Fe Leaves Original data GEO bulk
18 phr1 Shoot-Pi -0.50 >More info -0.62 >More info WT Root-Pi shoots Original data GEO bulk
19 aerial organ callus inducing medium 24h 0.57 >More info 0.55 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
20 mkk1/mkk2 control rep 0.63 >More info 0.48 >More info Col-0 Time 0 rep Original data GEO bulk
21 Differentiation 24h 0.61 >More info 0.49 >More info Differentiation 0h leaves Original data
22 col-5 hrpA 4h 0.52 >More info 0.57 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
23 msh1 albino 0.55 >More info 0.52 >More info WT aerial part Original data GEO bulk
24 col-5 hrpA 12h 0.54 >More info 0.53 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
25 afb3-1 2h KNO3 -0.40 >More info -0.67 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
26 Differentiation 12h 0.57 >More info 0.50 >More info Differentiation 0h leaves Original data
27 phr1 phl1 Root-Pi 0.48 >More info 0.58 >More info WT Shoot+Pi roots Original data GEO bulk
28 Col leaf 100mM NaCl 0.62 >More info 0.43 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
29 Col leaf 100mM NaCl 0.62 >More info 0.43 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
30 Col 100mM NaCl 0.62 >More info 0.43 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
31 GV3101 6dpi 0.60 >More info 0.45 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
32 30m light -0.44 >More info -0.61 >More info before light whole seedlings Original data GEO bulk
33 Rsch 3d 0.51 >More info 0.53 >More info Rsch CA Leaves Original data
34 E.orontii Infection 3 day 0.48 >More info 0.56 >More info Uninfection 3 day Original data Elicitor treatments
35 WT-16ºC 0.42 >More info 0.62 >More info WT-23ºC Original data GEO bulk
36 root - 08% oxygen - 2h 0.25 >More info 0.78 >More info root - 21% oxygen - 2h Original data GEO bulk
37 L2.4 mutant -0.46 >More info -0.57 >More info Wt Original data GEO bulk
38 tt4 0.51 >More info 0.51 >More info Col-0 aerial part Original data
39 Aerobic prt6 0.45 >More info 0.56 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
40 E.coli 0157 H7 7h 0.40 >More info 0.61 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
41 Col BTH 0.34 >More info 0.67 >More info Col rosettes Original data GEO bulk
42 NAA -AA 0.52 >More info 0.48 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
43 TaFLS overexpression line (OE1) 0.50 >More info 0.50 >More info Col-0 Rosette leaves Original data
44 hrpA fliC 7h 0.45 >More info 0.55 >More info Mock 7h hrpA fliC Original data GEO bulk
45 dark-hs -0.36 >More info -0.64 >More info dark-control seedling Original data
46 Day Time Treatment -0.44 >More info -0.55 >More info Day Time Control 1hr white light pulse aerial rosette Original data
47 root - 04% oxygen - 2h 0.20 >More info 0.78 >More info root - 21% oxygen - 2h Original data GEO bulk
48 Col whole leaf 7dpi 0.48 >More info 0.50 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
49 pnp1-1 3h +P 0.53 >More info 0.44 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
50 vtc2 day 7 induction 0.57 >More info 0.40 >More info WT day 7 induction day 7 induction of somatic embryogenesis Original data GEO bulk
51 mkk1/mkk2 24h BTH rep 0.52 >More info 0.45 >More info Col-0 24h BTH rep Original data GEO bulk
52 Heat shock optimum 0.32 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
53 WT Shoot Hypoxia 0.18 >More info 0.79 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
54 mil4 BTH 0.43 >More info 0.54 >More info Col BTH rosettes Original data GEO bulk
55 cs26 long day 0.52 >More info 0.44 >More info Leaves-WT-LD leaf Original data GEO bulk
56 Laer pretreat GA+JA Flg22 2h 0.52 >More info 0.44 >More info Laer pretreat water control leaf discs Original data GEO bulk
57 cop1 Seedling Dark -0.44 >More info -0.52 >More info WT Seedling Dark Original data GEO bulk
58 WT hypoxia 0.45 >More info 0.51 >More info WT normoxia whole rosette Original data
59 mkk2 control rep 0.55 >More info 0.40 >More info Col-0 Time 0 rep Original data GEO bulk
60 WT cold 0.54 >More info 0.41 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
61 C58 6dpi 0.65 >More info 0.30 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
62 ORS1 induced 0.32 >More info 0.63 >More info mock-induced rosette leaves Original data GEO bulk
63 Shoot dark control 7h 0.44 >More info 0.51 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
64 Aerobic e1 ate2 0.38 >More info 0.57 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
65 MPK6 ox Shoot Hypoxia 0.25 >More info 0.70 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
66 35S:PCO1 hypoxia -0.30 >More info -0.65 >More info WT hypoxia whole rosette Original data
67 Norflurazon 0.41 >More info 0.53 >More info Col-0 Original data GEO bulk
68 root - 08% oxygen - 30min 0.24 >More info 0.70 >More info root - 21% oxygen - 30min Original data GEO bulk
69 oas-a1.1 Cd 18h 0.43 >More info 0.51 >More info Cd 18h root Root Original data GEO bulk
70 Pseudomonas 0.43 >More info 0.51 >More info Control pseudomonas treated whole seedling Original data GEO bulk
71 Norflurazon 0.41 >More info 0.53 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
72 MYB12OX/tt4 0.43 >More info 0.51 >More info Col-0 aerial part Original data
73 C24 24h cold -0.55 >More info -0.38 >More info Col 24h cold leaf Original data GEO bulk
74 ABA+DMTU -0.39 >More info -0.54 >More info control Original data GEO bulk
75 cngc19 0.61 >More info 0.32 >More info Col-0 root Original data GEO bulk
76 A2hsfa1-ox in quadruple mutant -0.27 >More info -0.65 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
77 Callus 0.61 >More info 0.31 >More info Control for tissue data callus Original data GEO bulk
78 col-5 DC3000-avrRpm 4h 0.50 >More info 0.42 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
79 aba2 1% sucrose 12-day-old 0.34 >More info 0.58 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
80 Col0-PsmES4326-24hpi 0.31 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
81 Seedling KUA1-IOX est 0.33 >More info 0.59 >More info Seedling KUA1-IOX mock Original data
82 Col 3d 0.53 >More info 0.38 >More info Col CA Leaves Original data
83 mkk2 24h BTH rep 0.36 >More info 0.55 >More info Col-0 24h BTH rep Original data GEO bulk
84 AvrRpm1 2 h (leaf) 0.40 >More info 0.50 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
85 CT101 ozone 0.53 >More info 0.36 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
86 WT flg22 2h 0.54 >More info 0.35 >More info WT 0h Leaf tissue Original data GEO bulk
87 pnp1-1 1wk -P 0.59 >More info 0.30 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
88 Laer pretreat GA+JA Flg22 1h 0.56 >More info 0.32 >More info Laer pretreat water control leaf discs Original data GEO bulk
89 Laer pretreat GA+JA Flg22 0h 0.57 >More info 0.31 >More info Laer pretreat water control leaf discs Original data GEO bulk
90 35S:VND7-VP16-GR+CHX 0.31 >More info 0.57 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
91 seed germinating in countinuous light 24h SL 0.20 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
92 sfr3 control -0.24 >More info -0.63 >More info WT control All aerial tissue Original data GEO bulk
93 Col-0 Mock Shade 0.54 >More info 0.32 >More info Col-0 Mock WL seedlings Original data
94 Heat -0.36 >More info -0.50 >More info Control 90 minutes at 38°C. Original data GEO bulk
95 Night Time Treatment -0.28 >More info -0.58 >More info Night Time Control 1hr white light pulse aerial rosette Original data
96 efr-1 +elf18 10h -0.35 >More info -0.50 >More info WT +elf18 10h elf18 Original data GEO bulk
97 Laer Flg22 2h 0.51 >More info 0.33 >More info Laer Control leaf discs Original data GEO bulk
98 1h light (+Lincomycin) 0.34 >More info 0.50 >More info 1h light (-Lincomycin) seedlings Original data GEO bulk
99 xyl-grown cell culture- 1h 1mM Fru -0.12 >More info -0.72 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
100 Laer Flg22+GA 2h 0.50 >More info 0.33 >More info Laer Control leaf discs Original data GEO bulk
101 gun1-1 +lincomycin -0.28 >More info -0.55 >More info Col-0 +lincomycin Original data GEO bulk
102 Leafminer damaged seedlings 0.27 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
103 MYB12OX 0.32 >More info 0.50 >More info Col-0 aerial part Original data
104 NJ15 -0.02 >More info -0.79 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
105 Laer pretreat GA Flg22 0h 0.55 >More info 0.25 >More info Laer pretreat water control leaf discs Original data GEO bulk
106 Te ozone 0.52 >More info 0.28 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
107 FAMA induced 4h -0.19 >More info -0.61 >More info control 4h Whole seedling Original data GEO bulk
108 Dry late day -0.28 >More info -0.51 >More info Wet late day water-limited whole rosette Original data GEO bulk
109 P.p 10.5hai 0.27 >More info 0.52 >More info At-Control roots Original data GEO bulk
110 AvrRpt2 Col-0 6hpi 0.54 >More info 0.24 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
111 Red Light 4 h 0.24 >More info 0.54 >More info White Light 4 h Original data Light treatments
112 C24 ozone 0.52 >More info 0.25 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
113 root - 01% oxygen - 2h 0.13 >More info 0.64 >More info root - 21% oxygen - 2h Original data GEO bulk
114 pepr1-1 Pepr2-3 untreated 0.23 >More info 0.54 >More info WT untreated untreated Original data GEO bulk
115 arr10 arr12 -0.27 >More info -0.50 >More info WT Original data GEO bulk
116 B.cinerea 18 h infection 0.14 >More info 0.62 >More info Mock 18 h Original data Botrytis cinerea infection
117 Ws HS -0.17 >More info -0.59 >More info Ws control heat shocked seedling Original data GEO bulk
118 WT Root Hypoxia 0.08 >More info 0.68 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
119 Botrytis cinerea 18h 0.14 >More info 0.62 >More info control 18h Original data GEO bulk
120 2hr continuous KNO3 ECR cell 0.17 >More info 0.59 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
121 erf104-ko Flg22 4h 0.53 >More info 0.22 >More info erf104-ko H2O 4h Original data GEO bulk
122 coi1-16 ein2 sid2 ozone 0.50 >More info 0.25 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
123 2hr transitory KNO3 ECR cell 0.14 >More info 0.61 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
124 ani1 T0.5 -0.20 >More info -0.54 >More info WT T0.5 root tissue Original data GEO bulk
125 seedling -S Exp 0.14 >More info 0.60 >More info seedling FN Exp seedling Original data
126 light -0.55 >More info -0.18 >More info dark light seedling Original data GEO bulk
127 Dark 4 h pls RedLight 1min -0.23 >More info -0.50 >More info Dark 4 h Original data Light treatments
128 coi1 -0.20 >More info -0.52 >More info Col-0 Leaves Original data GEO bulk
129 Red/FR Light45min 0.04 >More info -0.75 >More info FarRed Light 45min Original data Light treatments
130 gun1gun5 Norflurazon -0.19 >More info -0.51 >More info Norflurazon a herbicide (Norflurazon) seedling Original data GEO bulk
131 root - 04% oxygen - 48h 0.06 >More info 0.63 >More info root - 21% oxygen - 48h Original data GEO bulk
132 root - 01% oxygen - 30min 0.19 >More info 0.50 >More info root - 21% oxygen - 30min Original data GEO bulk
133 cngc1-3 0.62 >More info 0.06 >More info Col-0 root Original data GEO bulk
134 gai Control 0.50 >More info 0.18 >More info Laer Control leaf discs Original data GEO bulk
135 Shoot apex inflorescence (after bolting) 0.02 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
136 siliques AtHb1 control 0.15 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
137 FarRed Light 45min -0.08 >More info 0.74 >More info White Light 45min Original data Light treatments
138 Stem+10 mg/g NPA 0.12 >More info 0.54 >More info Stem (mock control) NPA treated stem stem Original data GEO bulk
139 estradiole-induced ANAC059 -0.04 >More info -0.58 >More info transgenic (empty vector inducible system) Original data GEO bulk
140 root - 04% oxygen - 30min 0.09 >More info 0.51 >More info root - 21% oxygen - 30min Original data GEO bulk
141 Col-0 HS -0.05 >More info -0.53 >More info Col-0 control heat shocked seedling Original data GEO bulk
142 WT (Col-0) heat shock -0.05 >More info -0.53 >More info WT (Col-0) whole seedling Original data GEO bulk
143 M6PR transgenic leaf 100mM NaCl -0.52 >More info -0.05 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
144 Dry midday -0.04 >More info -0.52 >More info Wet midday water-limited whole rosette Original data GEO bulk
145 IAA7mII over-expressor IAA Treated -0.16 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
146 Shoot submergence 7h 0.51 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
147 CCA1-ox 6am non-polysomal -0.04 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
148 HairpinZ 4 h (leaf) 0.50 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
149 bri1-116 -0.27 >More info 0.73 >More info Col seedling Original data GEO bulk
150 Prohexadione 3 h -0.25 >More info 0.54 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings