A. thaliana-A. halleri hybrid

4.0:Analysis result - correlation network

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Module-based correlation network(MCN) centered on A. thaliana-A. halleri hybrid

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List of experiments correlated with "A. thaliana-A. halleri hybrid"

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Score	Experiment	Correlation from A. thaliana-A. halleri hybrid	Correlation to A. thaliana-A. halleri hybrid	Control Experiment	Treatment	Tissue	Link to original data	Experimental Category
1	A. thaliana-A. halleri hybrid	1.00 >More info	1.00 >More info	A. thaliana		mature leaves before flowering	Original data	GEO bulk
2	A. halleri	0.87 >More info	0.83 >More info	A. thaliana		mature leaves before flowering	Original data	GEO bulk
3	A. lyrata	0.83 >More info	0.73 >More info	A. thaliana		mature leaves before flowering	Original data	GEO bulk
4	A. thaliana-A. lyrata hybrid	0.74 >More info	0.77 >More info	A. thaliana		mature leaves before flowering	Original data	GEO bulk
5	Atwrky40	0.66 >More info	0.68 >More info	Col0	none	leaf	Original data	GEO bulk
6	Apex BLS>>TCP4 14DAS	0.58 >More info	0.61 >More info	Apex Col 14DAS			Original data	GEO bulk
7	Atwrky40 high light	0.62 >More info	0.57 >More info	Col0 high light	high light for 1h at 1000 μE m-2s-1	leaf	Original data	GEO bulk
8	AFB1 0h	-0.49 >More info	-0.70 >More info	Col 0h		Leaf	Original data	GEO bulk
9	Rsch CA	0.49 >More info	0.70 >More info	Col CA		Leaves	Original data
10	aox1a(line) untreated	0.49 >More info	0.69 >More info	WT(Col0) untreated (control aox1a)		leaf	Original data
11	eds16 whole leaf 6hpi	0.53 >More info	0.63 >More info	Col whole leaf 6hpi		whole leaf	Original data	GEO bulk
12	Cor 24h	-0.51 >More info	-0.63 >More info	Mock 24h	Cor		Original data	GEO bulk
13	Col whole leaf 5 dpi	-0.51 >More info	-0.63 >More info	Col whole leaf 5d UI		whole leaf	Original data	GEO bulk
14	eds16 whole leaf 5dpi	0.54 >More info	0.58 >More info	Col whole leaf 5dpi		whole leaf	Original data	GEO bulk
15	Col whole leaf 5dpi	-0.50 >More info	-0.62 >More info	Col whole leaf 0h UI		whole leaf	Original data	GEO bulk
16	Col whole leaf 3dpi	-0.47 >More info	-0.65 >More info	Col whole leaf 0h UI		whole leaf	Original data	GEO bulk
17	vtc1 (II)	-0.56 >More info	-0.54 >More info	Col (II)		rosette	Original data	GEO bulk
18	SOS1 100mM NaCl	-0.48 >More info	-0.62 >More info	Ws 100mM NaCl	100mM NaCl	leaf	Original data	GEO bulk
19	cpr5scv1	-0.58 >More info	-0.50 >More info	WT(COL)			Original data	GEO bulk
20	Col-0 INA 48h	-0.46 >More info	-0.62 >More info	Col-0 MOCK 48h			Original data	GEO bulk
21	WT in -N	-0.46 >More info	-0.61 >More info	WT in FN	nitrogen depletion	whole seedling	Original data	GEO bulk
22	cpr5	-0.52 >More info	-0.54 >More info	WT(COL)			Original data	GEO bulk
23	camta1/3 warm	-0.49 >More info	-0.55 >More info	WT warm		entire aerial part	Original data	GEO bulk
24	Mt	0.50 >More info	0.53 >More info	Col-0			Original data	GEO bulk
25	cpr5npr1	-0.57 >More info	-0.45 >More info	WT(COL)			Original data	GEO bulk
26	Primisulfuron EC50	-0.47 >More info	-0.55 >More info	Carrier (primisulfuron)			Original data	GEO bulk
27	GST 4 h (leaf)	-0.45 >More info	-0.55 >More info	Mock 4 h (leaf)			Original data	Elicitor treatments
28	miR 0h	-0.46 >More info	-0.54 >More info	Col 0h		Leaf	Original data	GEO bulk
29	rli	-0.46 >More info	-0.54 >More info	WT		whole plant	Original data	GEO bulk
30	M6PR transgenic 100mM NaCl	-0.37 >More info	-0.63 >More info	Ws 100mM NaCl	100mM NaCl	leaf	Original data	GEO bulk
31	camta2/3 warm	-0.49 >More info	-0.51 >More info	WT warm		entire aerial part	Original data	GEO bulk
32	Te CA	0.33 >More info	0.67 >More info	Col CA		Leaves	Original data
33	Elevated CO2 expanding leaf	-0.46 >More info	-0.54 >More info	Ambient CO2 expanding leaf		expanding leaf	Original data
34	rpoTmp(line) MLD stressed	-0.33 >More info	-0.67 >More info	WT(Col0) MLD stressed (control rpoTmp)		leaf	Original data
35	A1-1	-0.35 >More info	-0.64 >More info	WT			Original data	GEO bulk
36	Triazolopyrimidine EC50	-0.48 >More info	-0.51 >More info	Carrier (Triazolopyrimidine)			Original data	GEO bulk
37	cpr5npr1svi1	-0.52 >More info	-0.46 >More info	WT(COL)			Original data	GEO bulk
38	Cvi	0.47 >More info	0.51 >More info	Col-0			Original data	GEO bulk
39	Est SA	0.43 >More info	0.55 >More info	Col-0 SA			Original data	GEO bulk
40	Van SA	0.48 >More info	0.50 >More info	Col-0 SA			Original data	GEO bulk
41	Kin	0.43 >More info	0.55 >More info	Col-0			Original data	GEO bulk
42	Mutant hy5	0.36 >More info	0.61 >More info	Col-0			Original data	GEO bulk
43	CLO 4mM	-0.30 >More info	-0.67 >More info	untreated	4 weeks old at time of treatment	whole leaf	Original data	GEO bulk
44	Tsu	0.44 >More info	0.53 >More info	Col-0			Original data	GEO bulk
45	hy5 low light	0.36 >More info	0.61 >More info	Col-O low light			Original data	GEO bulk
46	ams	-0.53 >More info	-0.43 >More info	WT		anther	Original data	GEO bulk
47	camta1/2/3 warm	-0.51 >More info	-0.45 >More info	WT warm		entire aerial part	Original data	GEO bulk
48	G3P	-0.31 >More info	-0.65 >More info	Mock		distal leaves	Original data	GEO bulk
49	Col whole leaf amplified 5 dpi	-0.36 >More info	-0.59 >More info	Col whole leaf amplified 5d UI		whole leaf	Original data	GEO bulk
50	Tsu SA	0.38 >More info	0.56 >More info	Col-0 SA			Original data	GEO bulk
51	eds16 laser microdissected 5 dpi	0.42 >More info	0.52 >More info	Col laser microdissected 5 dpi		LMD leaf epidermal and mesophyll cells	Original data	GEO bulk
52	WT-SA	-0.37 >More info	-0.57 >More info	WT-mock spray	1 mM SA for 6 hrs (spray)	mature leaf	Original data	GEO bulk
53	24h volatiles Sm. R3089	0.23 >More info	0.70 >More info	24h untreated		whole seedling	Original data	GEO bulk
54	Cvi SA	0.43 >More info	0.50 >More info	Col-0 SA			Original data	GEO bulk
55	Kin SA	0.35 >More info	0.58 >More info	Col-0 SA			Original data	GEO bulk
56	des1 water	-0.39 >More info	-0.53 >More info	WT water	water	leaf	Original data	GEO bulk
57	smg7b-1	-0.39 >More info	-0.53 >More info	WT		whole plant	Original data	GEO bulk
58	upf3	-0.33 >More info	-0.59 >More info	WT		whole plant	Original data	GEO bulk
59	DC3000 24h	-0.41 >More info	-0.51 >More info	Mock 24h	DC3000		Original data	GEO bulk
60	AAF-OX	-0.38 >More info	-0.53 >More info	Col-0		Rosette leaf	Original data	GEO bulk
61	sni1	-0.37 >More info	-0.54 >More info	WT			Original data	GEO bulk
62	35S:RPS4 eds1-2 24h	0.35 >More info	0.56 >More info	35S:RPS4 24h		leaves	Original data
63	cat2-long-day 4d	0.50 >More info	0.41 >More info	Col0-LD4	transferred to air (400 ppm) for 4 days in long day regime (16h light/8h dark)	rosette leaf material	Original data	GEO bulk
64	aphid infested	-0.29 >More info	-0.62 >More info	control	aphid infested	Leaves	Original data	GEO bulk
65	aphid infested	-0.29 >More info	-0.62 >More info	CTR			Original data	GEO bulk
66	WT Atum 1h	-0.28 >More info	-0.62 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
67	Imidazolinone EC50	-0.35 >More info	-0.55 >More info	Carrier (Imidazolinone)			Original data	GEO bulk
68	SCR 48hr-S	-0.35 >More info	-0.55 >More info	SCR 0hr		endodermis	Original data
69	myb50 cork	0.36 >More info	0.53 >More info	wt cork		cork	Original data	GEO bulk
70	Col laser microdissected 5 dpi	-0.38 >More info	-0.50 >More info	Col laser microdissected 5d UI		LMD leaf epidermal and mesophyll cells	Original data	GEO bulk
71	CMV-WT	-0.36 >More info	-0.52 >More info	Mock-At		Aerial tissues	Original data	GEO bulk
72	SLWF infested	-0.35 >More info	-0.53 >More info	SLWF uninfested		rosette tissue	Original data	GEO bulk
73	Mutant sav3-2 (SH)	-0.30 >More info	-0.58 >More info	Col-0 (SH)			Original data	GEO bulk
74	sav3-2 shade	-0.30 >More info	-0.58 >More info	Col-0 shade		seedlings	Original data	GEO bulk
75	SCR 24hr-S	-0.36 >More info	-0.51 >More info	SCR 0hr		endodermis	Original data
76	Mt SA	0.32 >More info	0.54 >More info	Col-0 SA			Original data	GEO bulk
77	epiF3	0.36 >More info	0.50 >More info	WT Col-0		aerial part	Original data
78	lug3 leaves	0.24 >More info	0.61 >More info	WT-leaves		matured rosette leaves	Original data	GEO bulk
79	35S:RPS4 eds1-2 T0	0.16 >More info	0.69 >More info	35S:RPS4 T0		leaves	Original data
80	Full C2 T3	0.25 >More info	0.60 >More info	C2 C2del and (As)AKiin11 control T3	three days post infusion with Agrobacterium containing full-length SCTV C2	Arabidopsis rosette leaves	Original data
81	upf1	-0.28 >More info	-0.55 >More info	WT		whole plant	Original data	GEO bulk
82	msh1 recA3 untreated	-0.27 >More info	-0.56 >More info	WT untreated		above-ground parts	Original data	GEO bulk
83	Col ozone 2d	-0.27 >More info	-0.56 >More info	Col clean-air 2d	ozone		Original data	GEO bulk
84	BLM+INA	-0.33 >More info	-0.50 >More info	CK	BLM and INA	seedling	Original data
85	CMP 24hr	-0.31 >More info	-0.51 >More info	Acetone 24hr		root	Original data	GEO bulk
86	bak1-3 +Pep2 10h	-0.32 >More info	-0.50 >More info	WT +Pep2 10h	Pep2		Original data	GEO bulk
87	IAA7mII over-expressor IAA Treated	0.13 >More info	0.69 >More info	empty vector IAA Treated			Original data	GEO bulk
88	Tsu -Fe 48h Shoots	-0.22 >More info	-0.60 >More info	Tsu +Fe 24h Shoots			Original data	GEO bulk
89	GST NPP1 4 h (leaf)	-0.30 >More info	-0.51 >More info	Mock 4 h (leaf)			Original data	Elicitor treatments
90	psae1-3 stn7-1	-0.31 >More info	-0.50 >More info	WS		rosette leaves	Original data	GEO bulk
91	flu	-0.24 >More info	-0.56 >More info	WT Col			Original data	GEO bulk
92	npr1-3 DCA 48h	-0.29 >More info	-0.51 >More info	npr1-3 MOCK 48h			Original data	GEO bulk
93	tfl1-1-23ºC	-0.29 >More info	-0.51 >More info	WT-23ºC			Original data	GEO bulk
94	polysome mRNA eif3k	-0.14 >More info	-0.66 >More info	polysome mRNA WT		aerial part	Original data	GEO bulk
95	Sulfometuron EC50	-0.29 >More info	-0.51 >More info	Carrier			Original data	GEO bulk
96	AgNO3 3 h	-0.26 >More info	-0.53 >More info	Mock 3 h			Original data	Effect of ethylene inhibitors on seedlings
97	M6PR transgenic leaf 100mM NaCl	0.18 >More info	0.61 >More info	Col leaf 100mM NaCl		leaf	Original data	GEO bulk
98	Mature callus	-0.27 >More info	-0.52 >More info	Young callus		hypocotyls	Original data	GEO bulk
99	sfr6 cold	-0.23 >More info	-0.56 >More info	WT cold		All aerial tissue	Original data	GEO bulk
100	Fenclorim 4hr	-0.23 >More info	-0.55 >More info	Acetone 4hr		root	Original data	GEO bulk
101	CMP 4hr	-0.27 >More info	-0.51 >More info	Acetone 4hr		root	Original data	GEO bulk
102	Whole root - low pH 1H	-0.03 >More info	-0.74 >More info	Whole root - Std pH 1H	pH 4.6 for 1 hr		Original data	GEO bulk
103	gh3.5-1D 48 hpi	-0.27 >More info	-0.50 >More info	Col-0 uninoculated			Original data	GEO bulk
104	ara1/2mut	-0.12 >More info	-0.65 >More info	Col-3			Original data	GEO bulk
105	IMI 4mM	-0.26 >More info	-0.50 >More info	untreated	4 weeks old at time of treatment	whole leaf	Original data	GEO bulk
106	Brz220 3 h	0.53 >More info	0.22 >More info	Mock 3 h			Original data	Effect of brassinosteroid inhibitors on seedlings
107	Dry pre-dawn	-0.16 >More info	-0.59 >More info	Wet pre-dawn	water-limited	whole rosette	Original data	GEO bulk
108	aox1a(line) MLD stressed	-0.12 >More info	-0.63 >More info	WT(Col0) MLD stressed (control aox1a)		leaf	Original data
109	Osmotic Stress 24 h (shoot)	-0.23 >More info	-0.51 >More info	Stress mock 24 h (shoot)			Original data	Stress treatments
110	fil-8 yab3-2 yab5-1	-0.24 >More info	-0.50 >More info	wt		Apices	Original data	GEO bulk
111	bri1-116	0.01 >More info	0.73 >More info	Col		seedling	Original data	GEO bulk
112	ex1ex2flu dark 8hours/30 minute light	0.15 >More info	0.58 >More info	col dark 8hours/30 minute light			Original data	GEO bulk
113	Heat shock optimum	0.08 >More info	0.65 >More info	Heat shock baseline	Photosynthesis at optimum temperature	leaf first fully expanded	Original data	GEO bulk
114	Elevated CO2 AMPLE N NIGHT	-0.18 >More info	-0.54 >More info	Ambient CO2 AMPLE N NIGHT		Youngest Most Fully Expanded Leaf	Original data
115	mutant-line409	0.18 >More info	0.53 >More info	WT-control		whole plant	Original data	GEO bulk
116	Cs shoot	0.14 >More info	0.57 >More info	control shoot			Original data	GEO bulk
117	chl1-5 untreated	-0.21 >More info	-0.50 >More info	WT untreated			Original data	GEO bulk
118	seed germinating in countinuous light 24h SL	0.03 >More info	0.67 >More info	Control for tissue data		seed	Original data	GEO bulk
119	del1-1 mutant 5d uninfected	-0.20 >More info	-0.50 >More info	Col-0 5d uininfected		mature fully expanded leaves	Original data	GEO bulk
120	TNT-seedlings	-0.18 >More info	-0.51 >More info	DMF-control-seedlings	TNT-treated-seedlings	whole plant	Original data	GEO bulk
121	dor drought	-0.14 >More info	-0.54 >More info	WT drought			Original data	GEO bulk
122	35S::PI ap3-3 35S::AP-GR +DEX	-0.12 >More info	-0.56 >More info	0hr DEX			Original data	GEO bulk
123	FarRed Light 4 h	-0.11 >More info	-0.54 >More info	White Light 4 h			Original data	Light treatments
124	2hr continuous KNO3 PeR cell	0.12 >More info	0.52 >More info	2hr KCl control PeR cell		Pericycle root cells	Original data	GEO bulk
125	Mutant sav3-2 (WL)	-0.11 >More info	-0.52 >More info	Col-0 (WL)			Original data	GEO bulk
126	Light 0.5h steady-state	-0.08 >More info	-0.55 >More info	Dark steady-state	white light	seedlings (aerial parts)	Original data	GEO bulk
127	sav3-2 light	-0.11 >More info	-0.52 >More info	Col-0 light		seedlings	Original data	GEO bulk
128	Shoot -Cs	-0.10 >More info	-0.52 >More info	Control-shoot			Original data	GEO bulk
129	Shoot apex inflorescence (after bolting)	-0.04 >More info	0.65 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
130	Light 0.5h polysome-bound	-0.03 >More info	-0.55 >More info	Dark polysome-bound	white light	seedlings (aerial parts)	Original data	GEO bulk
131	WT 24h cold	-0.06 >More info	-0.51 >More info	WT warm	24h cold	entire aerial part	Original data	GEO bulk
132	t-zeatin 0.5 h	-0.03 >More info	0.60 >More info	Mock 0.5 h			Original data	Basic hormone treatment of seedlings
133	col-5 DC3000 12h	-0.05 >More info	-0.50 >More info	col-5 MgCl2 12h		Whole leaf	Original data	GEO bulk
134	shoot hypoxia p35S	0.04 >More info	-0.56 >More info	shoot hypoxia total			Original data	GEO bulk
135	Laer pretreat GA Flg22 1h	-0.19 >More info	0.71 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
136	CCA1-ox 6am non-polysomal	0.00 >More info	0.51 >More info	WT 6am non-polysomal		aerial part	Original data
137	PNO8 12 h	-0.01 >More info	0.50 >More info	Mock 12 h			Original data	Effect of other inhibitors on seedlings
138	short 12-degree-	0.08 >More info	-0.52 >More info	control short			Original data	GEO bulk
139	siliques AtHb1 control	-0.09 >More info	0.52 >More info	siliques WT control	control	silique	Original data	GEO bulk
140	short 17-degree-	0.09 >More info	-0.50 >More info	control short			Original data	GEO bulk
141	long 12-degree-	0.11 >More info	-0.51 >More info	control long			Original data	GEO bulk
142	Leafminer damaged seedlings	-0.17 >More info	0.56 >More info	Healthy seedlings		leaves	Original data	GEO bulk
143	Col0-PsmES4326-24hpi	-0.23 >More info	0.61 >More info	Col0-mock-24hpi		leaf	Original data	GEO bulk
144	Col BTH	-0.35 >More info	0.67 >More info	Col		rosettes	Original data	GEO bulk