4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on shoot-10 μM DEX- 12 hr
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List of experiments correlated with "shoot-10 μM DEX- 12 hr"  Help Download transcriptome of top 30
Score Experiment Correlation from
shoot-10 μM DEX- 12 hr		 Correlation to
shoot-10 μM DEX- 12 hr		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 shoot-10 μM DEX- 12 hr 1.00 >More info 1.00 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
2 shoot-10 μM DEX- 6 hr 0.89 >More info 0.87 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
3 shoot-10 μM DEX- 24hr 0.85 >More info 0.88 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
4 shoot-10 μM DEX- 3 hr 0.70 >More info 0.71 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
5 3x(p) 0.62 >More info 0.75 >More info 2x two week old seedlings Original data
6 30m light -0.54 >More info -0.80 >More info before light whole seedlings Original data GEO bulk
7 3x(m) 0.55 >More info 0.76 >More info 2x two week old seedlings Original data
8 leaf blade in D 0.70 >More info 0.59 >More info leaf blade in WL leaf blades Original data GEO bulk
9 1 h Light Total RNA -0.63 >More info -0.65 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
10 Ws 100mM NaCl 0.66 >More info 0.60 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
11 Ws leaf 100mM NaCl 0.66 >More info 0.60 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
12 Col-0 2HS 0.64 >More info 0.60 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
13 wavy 0.65 >More info 0.59 >More info WT Original data GEO bulk
14 sfr6 drought -0.66 >More info -0.56 >More info WT drought All aerial tissue Original data GEO bulk
15 M6PR transgenic 0mM NaCl 0.67 >More info 0.55 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
16 1 h Light IP RNA -0.60 >More info -0.62 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
17 FLIGHT TAGESB plate6 SHOOTS 0.58 >More info 0.64 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
18 flu dark 8hours/30 minute light 0.58 >More info 0.61 >More info col dark 8hours/30 minute light Original data GEO bulk
19 MPK6 ox Shoot Hypoxia 0.54 >More info 0.65 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
20 M6PR transgenic leaf 0mM NaCl 0.54 >More info 0.65 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
21 60m light -0.49 >More info -0.68 >More info before light whole seedlings Original data GEO bulk
22 SA 4mM 0.52 >More info 0.64 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
23 pip3 At2g19270 TDNA 9 0.58 >More info 0.56 >More info Col-0 whole plant Original data GEO bulk
24 CMV-A2b mutant 0.65 >More info 0.49 >More info Mock-At Aerial tissues Original data GEO bulk
25 OsSAP11 expressing -0.57 >More info -0.57 >More info WT seedlings Original data GEO bulk
26 SOS1 0mM NaCl 0.66 >More info 0.47 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
27 pmr5 0.60 >More info 0.52 >More info Col-0 Original data GEO bulk
28 P.syringae vir 4 h (leaf) 0.51 >More info 0.61 >More info Mock 4 h (leaf) Original data Elicitor treatments
29 Heat shock optimum 0.47 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
30 OsRLCK253 expressing -0.53 >More info -0.58 >More info WT seedlings Original data GEO bulk
31 root hypoxia total 0.62 >More info 0.49 >More info root control total Original data GEO bulk
32 WT Shoot Hypoxia 0.52 >More info 0.59 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
33 Leafminer damaged seedlings 0.54 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
34 petiole in D 0.58 >More info 0.52 >More info petiole in WL petioles Original data GEO bulk
35 gpa1-4/agb1-2 clean-air 3h 0.34 >More info 0.76 >More info Col clean-air 3h clean-air Original data GEO bulk
36 roottip hypoxia total 0.56 >More info 0.53 >More info roottip control total Original data GEO bulk
37 oligomycin 1 h 0.52 >More info 0.57 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
38 rdr1-1 -0.62 >More info -0.45 >More info Col-0 Original data GEO bulk
39 phyB mutant 16C 4hrs 0.41 >More info 0.66 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
40 ERF96OE 0.60 >More info 0.47 >More info WT leaf Original data
41 Col leaf 100mM NaCl 0.51 >More info 0.55 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
42 Col leaf 100mM NaCl 0.51 >More info 0.55 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
43 Col 100mM NaCl 0.51 >More info 0.55 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
44 low CO2 + light 0.56 >More info 0.50 >More info normal CO2 + light Original data GEO bulk
45 anti-sense for AtAOX1a 0.54 >More info 0.52 >More info WT Original data GEO bulk
46 Leafminer systemically damaged thaliana seedlings 0.57 >More info 0.49 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
47 WT (Col-0) inflorescence drought day 4 0.62 >More info 0.44 >More info WT (Col-0) inflorescence well-watered day 4 Unopen flower buds Original data GEO bulk
48 Atss3 Light4 -0.55 >More info -0.50 >More info Atss3 Dark0.5 Original data GEO bulk
49 rosette leaves fdh 0.64 >More info 0.41 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
50 IMI 4mM 0.52 >More info 0.53 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
51 2 hr Hypoxia Total RNA 0.57 >More info 0.47 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
52 Atss3 Light1 -0.57 >More info -0.46 >More info Atss3 Dark0.5 Original data GEO bulk
53 pmr5 pmr6 0.60 >More info 0.43 >More info Col-0 Original data GEO bulk
54 Anoxia 0.59 >More info 0.44 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
55 AAF-OX 0.47 >More info 0.56 >More info Col-0 Rosette leaf Original data GEO bulk
56 Col-0 mbs1-1 HL 3h -0.52 >More info -0.50 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
57 rcf1-1 cold 0h 0.64 >More info 0.38 >More info WT cold 0h Control seedlings Original data GEO bulk
58 Night Time Treatment -0.47 >More info -0.55 >More info Night Time Control 1hr white light pulse aerial rosette Original data
59 2 hr Hypoxia IP RNA 0.59 >More info 0.42 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
60 mbd4 mutant thaliana 10-day-old seedling 0.63 >More info 0.38 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
61 Col-0 low oxygen 0.58 >More info 0.43 >More info Col-0 control low oxygen root Original data GEO bulk
62 Col-0 SA 0.57 >More info 0.44 >More info Col-0 Original data GEO bulk
63 leaf blade in FRD 0.62 >More info 0.39 >More info leaf blade in WL leaf blades Original data GEO bulk
64 Col(gl) leaf 0mM NaCl 0.48 >More info 0.53 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
65 Col(gl) 0mM NaCl 0.48 >More info 0.53 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
66 8h-DC3000 avrRpm1 0.51 >More info 0.49 >More info 8h-DC3000 leaves Original data GEO bulk
67 Mutant arf2-6 -0.46 >More info -0.54 >More info Col Original data GEO bulk
68 Elevated CO2 AMPLE N DAY 0.48 >More info 0.52 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
69 MPK6 ox Root Hypoxia 0.55 >More info 0.44 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
70 Col0-PsmES4326-24hpi 0.38 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
71 4C 1h 0.48 >More info 0.51 >More info 4C 0h Original data GEO bulk
72 mbd6 mutant thaliana 10-day-old seedling 0.58 >More info 0.40 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
73 Mutant coi1(leaf) -0.57 >More info -0.41 >More info Col-0 (leaf) Original data GEO bulk
74 rosette leaves lcr 0.57 >More info 0.41 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
75 myb3 myb3r4d 0.63 >More info 0.35 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
76 FLIGHT TAGES 2B plate6 HYPOCOTYLS 0.59 >More info 0.39 >More info GROUND CONTROL TAGES 2B plate6 HYPOCOTYLS plant tissue Original data
77 Dry midday -0.40 >More info -0.58 >More info Wet midday water-limited whole rosette Original data GEO bulk
78 mutant acs6E (single mutant) -0.51 >More info -0.46 >More info col control (single mutant) Original data GEO bulk
79 ceh1 mutant 0.45 >More info 0.52 >More info Parent line Original data
80 pho1 0.50 >More info 0.46 >More info Col2WT Original data GEO bulk
81 petiole in FRD 0.53 >More info 0.43 >More info petiole in WL petioles Original data GEO bulk
82 Leafminer locally damaged thaliana seedlings 0.54 >More info 0.41 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
83 Nicotinamide-69hr 0.50 >More info 0.45 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
84 CHLM overexpression -0.50 >More info -0.45 >More info Col-0 estr green tissue Original data GEO bulk
85 Day Time Treatment -0.40 >More info -0.54 >More info Day Time Control 1hr white light pulse aerial rosette Original data
86 Lipopolysaccaride4 h (leaf) 0.51 >More info 0.43 >More info Mock 4 h (leaf) Original data Elicitor treatments
87 triploid female excess -0.42 >More info -0.52 >More info tetraploid Original data GEO bulk
88 hog1-7 -0.54 >More info -0.39 >More info wt whole seedling Original data GEO bulk
89 mutant-line774 -0.54 >More info -0.39 >More info WT-control whole plant Original data GEO bulk
90 CMP 4hr 0.58 >More info 0.35 >More info Acetone 4hr root Original data GEO bulk
91 gai Flg22 2h 0.50 >More info 0.43 >More info Laer Flg22 2h leaf discs Original data GEO bulk
92 Dry pre-dawn -0.38 >More info -0.54 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
93 pab polysome -0.28 >More info -0.64 >More info WT polysome seedling shoot/aerial seedling Original data
94 WT Na2S -0.54 >More info -0.37 >More info WT water Na2S leaf Original data GEO bulk
95 4x 0.52 >More info 0.39 >More info 2x two week old seedlings Original data
96 siliques AtHb1 control 0.39 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
97 cat2-2; 8h switch to ambient CO2 concentrations; 0.24 >More info 0.67 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
98 C24 24h cold -0.57 >More info -0.34 >More info Col 24h cold leaf Original data GEO bulk
99 tunicamycin -0.39 >More info -0.51 >More info DMF Original data GEO bulk
100 mutant acs2B (single mutant) -0.60 >More info -0.30 >More info col control (single mutant) Original data GEO bulk
101 AtMinD1 Temporal-induction 0.55 >More info 0.34 >More info Control whole plant Original data GEO bulk
102 WT AntimycinA 3h 0.56 >More info 0.33 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
103 WT 3H Cold 0.33 >More info 0.56 >More info WT control Original data GEO bulk
104 ein2-1 9 hpi A. brassicicola 0.51 >More info 0.38 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
105 penta mutant (higher order mutant) 0.50 >More info 0.39 >More info col control (higher order mutant) Original data GEO bulk
106 gpa1-4/agb1-2 ozone 3h 0.35 >More info 0.54 >More info Col ozone 3h ozone Original data GEO bulk
107 toc1-1-73hr 0.57 >More info 0.32 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
108 WT cold -0.55 >More info -0.33 >More info WT control All aerial tissue Original data GEO bulk
109 WT 30μM arsenate 8 hours. 0.54 >More info 0.34 >More info WT control (not supplemented). Original data
110 WT 2-4h Xanthomonas 0.34 >More info 0.54 >More info WT T0 Original data GEO bulk
111 AgNO3 3 h 0.51 >More info 0.37 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
112 Ba1 UV 0.35 >More info 0.53 >More info Ba1 mock UV seedling Original data
113 rcf1-1 cold 24h 0.50 >More info 0.37 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
114 plant (tga2-5-6) 4h OPDA 0.51 >More info 0.36 >More info plant (tga2-5-6) 4h control Original data GEO bulk
115 WT Root Hypoxia 0.52 >More info 0.35 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
116 cngc4 0.50 >More info 0.37 >More info Ws-2 Seedlings Original data GEO bulk
117 cs26 long day 0.52 >More info 0.35 >More info Leaves-WT-LD leaf Original data GEO bulk
118 SCR-GR Time 3H Dex 0.36 >More info 0.51 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
119 opr3 OPDA 2 h 0.36 >More info 0.51 >More info opr3 0 h Original data GEO bulk
120 WT (Col) glucose -0.61 >More info -0.25 >More info WT (Col) glucose seedlings Original data GEO bulk
121 anac017-2 AntimycinA 3h -0.59 >More info -0.27 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
122 edr1 36 h powdery mildew 0.50 >More info 0.36 >More info Col-0 36 h powdery mildew Original data GEO bulk
123 oas-a1.1 root -0.26 >More info -0.60 >More info WT-Untreated Root Original data GEO bulk
124 tetraploid 0.36 >More info 0.50 >More info diploid Original data GEO bulk
125 SCR-GR Time 12H Dex 0.50 >More info 0.35 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
126 tfl1-1-23ºC 0.62 >More info 0.23 >More info WT-23ºC Original data GEO bulk
127 GST NPP1 4 h (leaf) 0.56 >More info 0.28 >More info Mock 4 h (leaf) Original data Elicitor treatments
128 4d red light grown hmr-5 seedlings 0.51 >More info 0.33 >More info 4d red light grown WT(Col-0) seedlings Original data
129 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		0.56 >More info 0.27 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
130 Dark 6h ivd 0.56 >More info 0.27 >More info 0h ivd Original data
131 Protoplast Induced 0.33 >More info 0.50 >More info Uninduced Original data GEO bulk
132 atmospheric CO2 high Mg shoot 0.57 >More info 0.26 >More info atmospheric CO2 normal Mg shoot Shoot Original data
133 toc1-1-77hr 0.51 >More info 0.31 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
134 WT H2O2 3h 0.50 >More info 0.32 >More info WT water 3h 3h_H2O2 Original data GEO bulk
135 abi4-102 (II) 0.52 >More info 0.30 >More info Col (II) rosette Original data GEO bulk
136 mutant acs4A (single mutant) -0.56 >More info -0.26 >More info col control (single mutant) Original data GEO bulk
137 toc1-1-69hr 0.53 >More info 0.29 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
138 hepta mutant (higher order mutant) 0.51 >More info 0.31 >More info col control (higher order mutant) Original data GEO bulk
139 Col-Luc WT 3h antimycin A 0.53 >More info 0.29 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
140 ptpks2 -0.31 >More info -0.51 >More info Col-WT leaves Original data GEO bulk
141 Kas-1 -Fe 24h -0.29 >More info -0.52 >More info Kas-1 +Fe 24h roots Original data GEO bulk
142 Kas -Fe 24h Roots -0.29 >More info -0.52 >More info Kas +Fe 24h Roots Original data GEO bulk
143 Dex-rga(delta17) 4h GA4 -0.29 >More info -0.52 >More info Vector 4h GA4 shoots Original data GEO bulk
144 gai Control 0.54 >More info 0.26 >More info Laer Control leaf discs Original data GEO bulk
145 til1-1 22C 0.50 >More info 0.30 >More info Col-0 22C Original data GEO bulk
146 Methyl Jasmonate 3 h 0.27 >More info 0.53 >More info Mock 3 h Original data Basic hormone treatment of seedlings
147 Stem+10 mg/g NPA -0.51 >More info -0.28 >More info Stem (mock control) NPA treated stem stem Original data GEO bulk
148 2hr continuous KNO3 PrR cell 0.52 >More info 0.27 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
149 P.p 6hai 0.53 >More info 0.24 >More info At-Control roots Original data GEO bulk
150 seedlings protease IV 0.50 >More info 0.27 >More info seedlings nontreated control whole seedling Original data
151 Shoot apex inflorescence (after bolting) 0.12 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
152 Col BTH 0.10 >More info 0.67 >More info Col rosettes Original data GEO bulk
153 P.p 10.5hai 0.53 >More info 0.23 >More info At-Control roots Original data GEO bulk
154 oligomycin 4 h 0.51 >More info 0.24 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
155 RRE1 Chitin 0.52 >More info 0.23 >More info Chitin Original data GEO bulk
156 Apex BLS>>TCP4 14DAS -0.57 >More info -0.17 >More info Apex Col 14DAS Original data GEO bulk
157 CMP 24hr 0.52 >More info 0.22 >More info Acetone 24hr root Original data GEO bulk
158 IAA7mII over-expressor IAA Treated 0.04 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
159 bri1-116 0.00 >More info 0.73 >More info Col seedling Original data GEO bulk
160 rsa3-1 Na 24h 0.20 >More info 0.53 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
161 Seedling-HeatStressed TOTALmRNA 0.55 >More info 0.17 >More info Seedling-control TOTALmRNA seedling Original data
162 seedling 1.5h after HZE WT 0.52 >More info 0.20 >More info seedling day 1 unirradiated WT 1.5h Original data
163 WT Bc inoculation 14h 0.54 >More info 0.17 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
164 seed germinating in countinuous light 24h SL 0.04 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
165 erf5 erf6 +chitooctaose 0.21 >More info 0.50 >More info WT+chitooctaose chitooctaose seedlings Original data GEO bulk
166 AGL24 induced -0.14 >More info -0.57 >More info WT-ESTRADIOL Original data GEO bulk
167 Seedling-HeatStressed POLYSOMESmRNA 0.54 >More info 0.16 >More info Seedling-control POLYSOMESmRNA seedling Original data
168 Laer pretreat GA Flg22 1h -0.01 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
169 treated group 0.12 >More info 0.58 >More info Control group Original data
170 35S::HRE1 Hypoxic -0.09 >More info -0.60 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
171 arr10 arr12 -0.57 >More info -0.11 >More info DMSO--WT DMSO roots Original data GEO bulk
172 AFB1 0h 0.56 >More info 0.11 >More info Col 0h Leaf Original data GEO bulk
173 vte1-1 3d vernalization -0.53 >More info -0.13 >More info WT 3d vernalization Original data GEO bulk
174 5-Triiodobenzoic acid3 h 0.15 >More info 0.51 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
175 short 17-degree- -0.12 >More info -0.53 >More info control short Original data GEO bulk
176 cat2-short-day 4d 0.09 >More info 0.56 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
177 gapcp1gapcp2 ABA -0.07 >More info -0.58 >More info WT ABA ABA seedling Original data GEO bulk
178 msh1 recA3 untreated 0.13 >More info 0.50 >More info WT untreated above-ground parts Original data GEO bulk
179 35S::PI ap3-3 35S::AP-GR +DEX 0.01 >More info 0.59 >More info 0hr DEX Original data GEO bulk
180 Col-0 24hpi A. brassicicola 0.52 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
181 JA 3h -0.03 >More info 0.57 >More info EtOH 3h 3hr Original data GEO bulk
182 sid2-1 warm 0.03 >More info 0.50 >More info WT warm entire aerial part Original data GEO bulk
183 seedling 3h after HZE WT 0.50 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
184 HairpinZ 4 h (leaf) 0.54 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
185 siliques WT hypoxia 0.50 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
186 afb3-1 2h KCl -0.08 >More info 0.58 >More info Ws 2h KCl 2 hours of 5 mM KCl Arabidopsis root Original data GEO bulk
187 CCA1-ox 6am non-polysomal -0.07 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
188 root longitudinal zone-2 -Fe -0.17 >More info 0.52 >More info root longitudinal zone-2 standard Original data GEO bulk