root longitudinal zone-1 low sulfur

4.0:Analysis result - correlation network

Home Method Manual History

Module-based correlation network(MCN) centered on root longitudinal zone-1 low sulfur

> How to read results

Simple
All

>>Show Interactive view (test)

List of experiments correlated with "root longitudinal zone-1 low sulfur"

Download transcriptome of top 30

Score	Experiment	Correlation from root longitudinal zone-1 low sulfur	Correlation to root longitudinal zone-1 low sulfur	Control Experiment	Treatment	Tissue	Link to original data	Experimental Category
1	root longitudinal zone-1 low sulfur	1.00 >More info	1.00 >More info	root longitudinal zone-1 pH 5.7			Original data	GEO bulk
2	root longitudinal zone-2 low sulfur	0.76 >More info	0.78 >More info	root longitudinal zone-2 pH 5.7			Original data	GEO bulk
3	root epidermis and lateral root cap -S	0.73 >More info	0.71 >More info	root epidermis and lateral root cap pH5.7			Original data	GEO bulk
4	root stele -S	0.70 >More info	0.73 >More info	root stele pH5.7			Original data	GEO bulk
5	SCR-GR Time 1H Dex	-0.61 >More info	-0.75 >More info	SCR-GR Time 0H Dex	Dex media for 1 hour		Original data	GEO bulk
6	Whole root - low pH 3H	-0.63 >More info	-0.65 >More info	Whole root - Std pH 3H	pH 4.6 for 3 hr		Original data	GEO bulk
7	SHR-GR Time 12H Dex	0.63 >More info	0.64 >More info	SHR-GR Time 0H Dex	Dex media for 12 hours		Original data	GEO bulk
8	root longitudinal zone-3 low sulfur	0.60 >More info	0.65 >More info	root longitudinal zone-3 pH 5.7			Original data	GEO bulk
9	low CO2 + light	-0.59 >More info	-0.66 >More info	normal CO2 + light			Original data	GEO bulk
10	Whole root - low pH 6H	-0.61 >More info	-0.63 >More info	Whole root - Std pH 6H	pH 4.6 for 6 hr		Original data	GEO bulk
11	ABA JA 24h	-0.53 >More info	-0.69 >More info	EtOH 24h	24hr		Original data	GEO bulk
12	SHR-GR Time 1H Dex	-0.64 >More info	-0.57 >More info	SHR-GR Time 0H Dex	Dex media for 1 hour		Original data	GEO bulk
13	root endodermis -S	0.66 >More info	0.50 >More info	root endodermis and quiescent center pH5.7			Original data	GEO bulk
14	WT (Col) glucose	0.58 >More info	0.58 >More info	WT (Col)	glucose	seedlings	Original data	GEO bulk
15	Apex mir-3TCP 14DAS	0.55 >More info	0.60 >More info	Apex Col 14DAS			Original data	GEO bulk
16	root columella root cap -S	0.62 >More info	0.52 >More info	root columella root cap pH5.7			Original data	GEO bulk
17	Nicotinamide-77hr	-0.61 >More info	-0.52 >More info	WT-untreated-77hr	nicotinamide	aerial tissue	Original data	GEO bulk
18	SCR-GR Time 12H Dex	-0.61 >More info	-0.52 >More info	SCR-GR Time 0H Dex	Dex media for 12 hours		Original data	GEO bulk
19	4h decapitation	0.64 >More info	0.49 >More info	axillary-buds-before-decapitation		axillary shoots	Original data	GEO bulk
20	NaCl scm	0.47 >More info	0.65 >More info	NaCl Col			Original data	GEO bulk
21	bHLH122 ox	0.50 >More info	0.61 >More info	WT Col-0	bHLH122 overexpression	shoot	Original data	GEO bulk
22	Col-0 (t-zeatin 3 h)	0.48 >More info	0.61 >More info	Col-0			Original data	Cytokinin treatment of seedlings
23	dorn1-1 Root 100 mM ATP 30 min	0.60 >More info	0.48 >More info	Col-0 Root 100 mM ATP 30 min		Roots of 5 day-old seedlings	Original data
24	low CO2 + dark	-0.53 >More info	-0.55 >More info	normal CO2 + light			Original data	GEO bulk
25	iron minus 0 h	-0.55 >More info	-0.52 >More info	iron +0 h		root	Original data	GEO bulk
26	21h-DC3000 avrRpm1	0.45 >More info	0.62 >More info	21h-DC3000		leaves	Original data	GEO bulk
27	Inflorescences Trp1	0.40 >More info	0.67 >More info	Inflorescences ler		inflorescences	Original data	GEO bulk
28	root cortex 40 mM NaCl	-0.59 >More info	-0.48 >More info	root cortex			Original data	GEO bulk
29	arp6-10 12 ºC	0.50 >More info	0.56 >More info	Col-0 12 ºC		whole seedlings	Original data	GEO bulk
30	TA induced	-0.49 >More info	-0.57 >More info	Methanol TA		Suspension cells	Original data	GEO bulk
31	sfr6 drought	0.40 >More info	0.66 >More info	WT drought		All aerial tissue	Original data	GEO bulk
32	Genotoxic Stress 3 h (shoot)	0.47 >More info	0.58 >More info	Stress mock 3 h (shoot)			Original data	Stress treatments
33	ABA SA 24h	-0.32 >More info	-0.72 >More info	EtOH 24h	24hr		Original data	GEO bulk
34	BAM7 Ox untreated	0.58 >More info	0.45 >More info	WT untreated	none	shoot	Original data
35	Nicotinamide-69hr	-0.52 >More info	-0.51 >More info	WT-untreated-69hr	nicotinamide	aerial tissue	Original data	GEO bulk
36	mbd11 mutant thaliana 10-day-old seedling	-0.51 >More info	-0.51 >More info	WT thaliana 10-day-old seedling		10 days old seedling	Original data
37	rosette leaves fdh	-0.55 >More info	-0.47 >More info	rosette leaves WT		Young rosette leaves 2mm to 1cm	Original data	GEO bulk
38	P.p 2.5hai	-0.56 >More info	-0.46 >More info	At-Control		roots	Original data	GEO bulk
39	21h-DC3000 hrpA	0.46 >More info	0.56 >More info	21h-DC3000		leaves	Original data	GEO bulk
40	embryo proper linear-cotyledon	0.54 >More info	0.47 >More info	whole seeds linear-cotyledon			Original data	GEO bulk
41	roottip hypoxia pSHR	0.46 >More info	0.55 >More info	roottip hypoxia total	hypoxia	roottip	Original data	GEO bulk
42	SHR-GR Time 6H Dex	0.45 >More info	0.56 >More info	SHR-GR Time 0H Dex	Dex media for 6 hours		Original data	GEO bulk
43	stn7-1	0.49 >More info	0.52 >More info	Col-0		rosette leaves	Original data	GEO bulk
44	WT AntimycinA 3h	-0.57 >More info	-0.43 >More info	WT water 3h	3h_AntimycinA		Original data	GEO bulk
45	ABA 24h	-0.56 >More info	-0.44 >More info	EtOH 24h	24hr		Original data	GEO bulk
46	Differentiation 36h	0.56 >More info	0.43 >More info	Differentiation 0h		leaves	Original data
47	GiantCell Root	0.59 >More info	0.39 >More info	Control Root		laser captured giant cells	Original data	GEO bulk
48	Roots Cd	0.44 >More info	0.54 >More info	Roots control	Cd	Root	Original data	GEO bulk
49	npr1 sni1 ssn2	0.53 >More info	0.44 >More info	npr1 sni1 water	water	seedling	Original data	GEO bulk
50	Nicotinamide-53hr	-0.58 >More info	-0.39 >More info	WT-untreated-53hr	nicotinamide	aerial tissue	Original data	GEO bulk
51	vtc2 mature somatic embryo	-0.55 >More info	-0.42 >More info	WT mature somatic embryo		mature somatic embryo	Original data	GEO bulk
52	SCR-GR Time 6H Dex	-0.62 >More info	-0.35 >More info	SCR-GR Time 0H Dex	Dex media for 6 hours		Original data	GEO bulk
53	dorn1-1 Root MES buffer 30 min	0.54 >More info	0.43 >More info	Col-0 Root MES buffer 30 min		Roots of 5 day-old seedlings	Original data
54	Nicotinamide-85hr	-0.57 >More info	-0.39 >More info	WT-untreated-85hr	nicotinamide	aerial tissue	Original data	GEO bulk
55	Nicotinamide-89hr	-0.52 >More info	-0.44 >More info	WT-untreated-89hr	nicotinamide	aerial tissue	Original data	GEO bulk
56	tZ	0.61 >More info	0.35 >More info	DMSO--WT	trans-zeatin	roots	Original data	GEO bulk
57	PNO8 12 h	-0.38 >More info	-0.58 >More info	Mock 12 h			Original data	Effect of other inhibitors on seedlings
58	Col ozone 3h	-0.38 >More info	-0.58 >More info	Col clean-air 3h	ozone		Original data	GEO bulk
59	CMV-WT	-0.57 >More info	-0.38 >More info	Mock-At		Aerial tissues	Original data	GEO bulk
60	roottip control pSCR	0.41 >More info	0.54 >More info	roottip control total	control	roottip	Original data	GEO bulk
61	agb1 -ABA LF	-0.41 >More info	-0.54 >More info	Col-0 -ABA LF		Leaves of five week-old plants	Original data	GEO bulk
62	dcl3-1	-0.55 >More info	-0.39 >More info	Col-0			Original data	GEO bulk
63	shoot control p35S	-0.55 >More info	-0.39 >More info	shoot control total			Original data	GEO bulk
64	roottip hypoxia pSCR	0.39 >More info	0.55 >More info	roottip hypoxia total	hypoxia	roottip	Original data	GEO bulk
65	35:SUB1C	-0.52 >More info	-0.42 >More info	WT		whole seedling	Original data	GEO bulk
66	35S::MBF1c	-0.43 >More info	-0.51 >More info	control			Original data	GEO bulk
67	Whole root - low pH 12H	-0.54 >More info	-0.39 >More info	Whole root - Std pH 12H	pH 4.6 for 12 hr		Original data	GEO bulk
68	nNOS-control	-0.51 >More info	-0.42 >More info	WT-control		leaf	Original data
69	seedlings-week-old RECA1-overexpressing transgenic	-0.54 >More info	-0.38 >More info	seedlings-week-old Col-0		seedlings	Original data
70	WT Shoot-Pi	-0.51 >More info	-0.41 >More info	WT Shoot+Pi		shoots	Original data	GEO bulk
71	Nicotinamide-65hr	-0.51 >More info	-0.41 >More info	WT-untreated-65hr	nicotinamide	aerial tissue	Original data	GEO bulk
72	Col-Luc WT 3h antimycin A	-0.51 >More info	-0.40 >More info	Col-Luc WT mock	50 µM antimycin A for 3 hours	whole green tissue	Original data	GEO bulk
73	GA 120min	-0.38 >More info	-0.53 >More info	CON120	GA 120 min.	root tips	Original data	GEO bulk
74	pepr1-1 Pepr2-3 +Pep2 10h	0.62 >More info	0.29 >More info	WT +Pep2 10h	Pep2		Original data	GEO bulk
75	detached inflorescences 24h	-0.55 >More info	-0.35 >More info	detached inflorescences 0h	detached dark-held immature inflorescences	inflorescences from the primary bolts	Original data	GEO bulk
76	Nicotinamide-73hr	-0.54 >More info	-0.36 >More info	WT-untreated-73hr	nicotinamide	aerial tissue	Original data	GEO bulk
77	root epidermis and lateral root cap 40 mM NaCl	-0.55 >More info	-0.34 >More info	root epidermis and lateral root cap			Original data	GEO bulk
78	Fenclorim 24hr	-0.52 >More info	-0.37 >More info	Acetone 24hr		root	Original data	GEO bulk
79	Root -K	-0.53 >More info	-0.36 >More info	Control-root			Original data	GEO bulk
80	Differentiation 48h	0.52 >More info	0.37 >More info	Differentiation 0h		leaves	Original data
81	edr1 36 h powdery mildew	-0.50 >More info	-0.38 >More info	Col-0 36 h powdery mildew			Original data	GEO bulk
82	rdr6-15	0.60 >More info	0.28 >More info	Col-0			Original data	GEO bulk
83	K starvation (root)	-0.53 >More info	-0.34 >More info	Ws (root)			Original data	GEO bulk
84	root longitudinal zone-4 low sulfur	0.56 >More info	0.31 >More info	root longitudinal zone-4 pH 5.7			Original data	GEO bulk
85	Nicotinamide-61hr	-0.50 >More info	-0.37 >More info	WT-untreated-61hr	nicotinamide	aerial tissue	Original data	GEO bulk
86	cov1 cov2 stem Base	-0.61 >More info	-0.26 >More info	WT stem Base		stem Base	Original data	GEO bulk
87	root stele 40 mM NaCls	-0.55 >More info	-0.31 >More info	root stele			Original data	GEO bulk
88	DUO1 induced 6h	0.53 >More info	0.33 >More info	6hr-not-induced		whole plant	Original data	GEO bulk
89	Nicotinamide-57hr	-0.52 >More info	-0.34 >More info	WT-untreated-57hr	nicotinamide	aerial tissue	Original data	GEO bulk
90	dark +H2O2	0.31 >More info	0.55 >More info	dark	5 mM H2O2	seedling	Original data	GEO bulk
91	root callus inducing medium 96 h	0.59 >More info	0.27 >More info	root callus inducing medium 0 h	96 hours after incubating on callus inducing medium	root explants	Original data	GEO bulk
92	WT H2O2 3h	-0.54 >More info	-0.31 >More info	WT water 3h	3h_H2O2		Original data	GEO bulk
93	Differentiation 24h	0.52 >More info	0.33 >More info	Differentiation 0h		leaves	Original data
94	rcf1-1 cold 24h	-0.32 >More info	-0.53 >More info	WT cold 24h	cold at 4°C	seedlings	Original data	GEO bulk
95	Col-7 Sucrose	0.57 >More info	0.28 >More info	col-7			Original data	GEO bulk
96	cov1 cov2 stem Top	0.55 >More info	0.29 >More info	WT stem Top		stem Top	Original data	GEO bulk
97	Uniconazole 12 h	-0.53 >More info	-0.31 >More info	Mock 12 h			Original data	Effect of GA inhibitors on seedlings
98	Aerobic e1 ate2	-0.30 >More info	-0.54 >More info	Aerobic Col-0	aerobic (normal) conditions	seedlings	Original data	GEO bulk
99	vtc2 day 7 induction	0.57 >More info	0.26 >More info	WT day 7 induction		day 7 induction of somatic embryogenesis	Original data	GEO bulk
100	1h +Pi	0.50 >More info	0.32 >More info	1h -Pi		root	Original data	GEO bulk
101	root callus inducing medium 48 h	0.57 >More info	0.25 >More info	root callus inducing medium 0 h	48 hours after incubating on callus inducing medium	root explants	Original data	GEO bulk
102	dyt1	0.58 >More info	0.23 >More info	WT		anther	Original data	GEO bulk
103	axr2	0.50 >More info	0.30 >More info	WT-mock	mock	dark-grown seedlings	Original data	GEO bulk
104	shoot hypoxia p35S	-0.55 >More info	-0.25 >More info	shoot hypoxia total			Original data	GEO bulk
105	phr1 Root-Pi	-0.52 >More info	-0.28 >More info	WT Root+Pi		roots	Original data	GEO bulk
106	IAA Treated	0.51 >More info	0.28 >More info	Negative Control			Original data	GEO bulk
107	12h volatiles Sp. HRO-C48	0.58 >More info	0.21 >More info	12h untreated		whole seedling	Original data	GEO bulk
108	Laer pretreat GA Flg22 1h	0.08 >More info	0.71 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
109	CDB1-Knockout	0.23 >More info	0.55 >More info	WT			Original data	GEO bulk
110	root longitudinal zone-2 NaCl	-0.50 >More info	-0.27 >More info	root longitudinal zone-2			Original data	GEO bulk
111	Control KNO3 roots - 8hours	-0.50 >More info	-0.27 >More info	Control KCl roots - 8hours	5mM KNO3 on both sides for 8 hours	roots	Original data	GEO bulk
112	Nicotinamide-49hr	-0.50 >More info	-0.27 >More info	WT-untreated-49hr	nicotinamide	aerial tissue	Original data	GEO bulk
113	TaFLS overexpression line (OE1)	0.51 >More info	0.26 >More info	Col-0		Rosette leaves	Original data
114	Heat shock optimum	0.12 >More info	0.65 >More info	Heat shock baseline	Photosynthesis at optimum temperature	leaf first fully expanded	Original data	GEO bulk
115	dcl2-1	-0.52 >More info	-0.24 >More info	Col-0			Original data	GEO bulk
116	Osmotic Stress 24 h (root)	-0.53 >More info	-0.23 >More info	Stress mock 24 h (root)			Original data	Stress treatments
117	P.p 6hai	-0.53 >More info	-0.22 >More info	At-Control		roots	Original data	GEO bulk
118	Shoot apex inflorescence (after bolting)	0.10 >More info	0.65 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
119	Inflorescence miR-NGA	0.60 >More info	0.14 >More info	Inflorescence wt			Original data	GEO bulk
120	Nicotinamide-81hr	-0.51 >More info	-0.23 >More info	WT-untreated-81hr	nicotinamide	aerial tissue	Original data	GEO bulk
121	6h +Pi	0.51 >More info	0.23 >More info	6h -Pi		root	Original data	GEO bulk
122	Salt Stress 24 h (root)	-0.50 >More info	-0.24 >More info	Stress mock 24 h (root)			Original data	Stress treatments
123	bri1-116	0.01 >More info	0.73 >More info	Col		seedling	Original data	GEO bulk
124	PNO8 3 h	-0.17 >More info	-0.56 >More info	Mock 3 h			Original data	Effect of other inhibitors on seedlings
125	CMV-A2b mutant	-0.52 >More info	-0.21 >More info	Mock-At		Aerial tissues	Original data	GEO bulk
126	M6PR transgenic leaf 100mM NaCl	-0.51 >More info	-0.20 >More info	Col leaf 100mM NaCl		leaf	Original data	GEO bulk
127	root callus inducing medium 24h	0.53 >More info	0.18 >More info	root callus inducing medium 0 h	24 hours after incubating on callus inducing medium	root explants	Original data	GEO bulk
128	rdr2-1	-0.51 >More info	-0.19 >More info	Col-0			Original data	GEO bulk
129	CeO2 germinant	0.17 >More info	0.50 >More info	Millipore Water germinant	CeO2	seedling	Original data
130	GO5; 8h switch to ambient CO2 concentrations;	-0.07 >More info	-0.58 >More info	WT; 8h switch to ambient CO2 concentrations;		2 whole rosettes	Original data
131	MYB29 OE	0.58 >More info	0.05 >More info	WT for MYB29/76			Original data	GEO bulk
132	root - 04% oxygen - 30min	-0.08 >More info	-0.55 >More info	root - 21% oxygen - 30min			Original data	GEO bulk
133	seed germinating in countinuous light 24h SL	-0.06 >More info	0.67 >More info	Control for tissue data		seed	Original data	GEO bulk
134	axr2-BR	0.52 >More info	0.09 >More info	BR	BR	dark-grown seedlings	Original data	GEO bulk
135	CCA1-ox 6am non-polysomal	0.10 >More info	0.51 >More info	WT 6am non-polysomal		aerial part	Original data
136	rdr6-15	0.05 >More info	0.55 >More info	Col-0		plant inflorescence	Original data
137	Bay-0-30min IAA	-0.50 >More info	-0.10 >More info	Bay-0-0h IAA		whole plant	Original data	GEO bulk
138	cdpk6-yfp	0.10 >More info	0.50 >More info	Kan		seedlings	Original data	GEO bulk
139	IAA7mII over-expressor IAA Treated	-0.10 >More info	0.69 >More info	empty vector IAA Treated			Original data	GEO bulk
140	SCR-GR Time 3H Dex	-0.50 >More info	-0.07 >More info	SCR-GR Time 0H Dex	Dex media for 3 hours		Original data	GEO bulk
141	Col BTH	-0.21 >More info	0.67 >More info	Col		rosettes	Original data	GEO bulk
142	siliques AtHb1 control	-0.11 >More info	0.52 >More info	siliques WT control	control	silique	Original data	GEO bulk
143	Col0-PsmES4326-24hpi	-0.31 >More info	0.61 >More info	Col0-mock-24hpi		leaf	Original data	GEO bulk
144	Leafminer damaged seedlings	-0.33 >More info	0.56 >More info	Healthy seedlings		leaves	Original data	GEO bulk