cry1 low light

4.0:Analysis result - correlation network

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Module-based correlation network(MCN) centered on cry1 low light

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List of experiments correlated with "cry1 low light"

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Score	Experiment	Correlation from cry1 low light	Correlation to cry1 low light	Control Experiment	Treatment	Tissue	Link to original data	Experimental Category
1	cry1 low light	1.00 >More info	1.00 >More info	Col-O low light			Original data	GEO bulk
2	Mutant cry1	1.00 >More info	1.00 >More info	Col-0			Original data	GEO bulk
3	Mutant cry1 (High Light)	0.87 >More info	0.88 >More info	Col-0 (High Light)			Original data	GEO bulk
4	cry1 high light	0.87 >More info	0.88 >More info	Col-O high light			Original data	GEO bulk
5	MPK6 ox Shoot Hypoxia	-0.58 >More info	-0.91 >More info	WT Shoot Normoxia (mock)	Hypoxia	Shoot	Original data	GEO bulk
6	sav3-2 light	-0.61 >More info	-0.74 >More info	Col-0 light		seedlings	Original data	GEO bulk
7	Mutant sav3-2 (WL)	-0.61 >More info	-0.74 >More info	Col-0 (WL)			Original data	GEO bulk
8	Mutant sav3-2 (SH)	-0.44 >More info	-0.71 >More info	Col-0 (SH)			Original data	GEO bulk
9	sav3-2 shade	-0.44 >More info	-0.71 >More info	Col-0 shade		seedlings	Original data	GEO bulk
10	35S::PI ap3-3 35S::AP-GR +DEX	-0.47 >More info	-0.63 >More info	0hr DEX			Original data	GEO bulk
11	seedling 12h after HZE WT	-0.54 >More info	-0.52 >More info	seedling day 1 unirradiated WT	12h		Original data
12	Col-0 DCA 48h	-0.48 >More info	-0.58 >More info	Col-0 MOCK 48h			Original data	GEO bulk
13	ceh1 mutant	-0.41 >More info	-0.64 >More info	Parent line			Original data
14	Elevated CO2 AMPLE N DAY	-0.36 >More info	-0.68 >More info	Ambient CO2 AMPLE N DAY		Youngest Most Fully Expanded Leaf	Original data
15	hy5 low light	0.50 >More info	0.51 >More info	Col-O low light			Original data	GEO bulk
16	Mutant hy5	0.50 >More info	0.51 >More info	Col-0			Original data	GEO bulk
17	20h Col-0	-0.42 >More info	-0.58 >More info	00h Col-0			Original data	GEO bulk
18	WT Shoot Hypoxia	-0.29 >More info	-0.69 >More info	WT Shoot Normoxia (mock)	Hypoxia	Shoot	Original data	GEO bulk
19	erf104-ko H2O 4h	-0.43 >More info	-0.54 >More info	Col-0 H2O 4h			Original data	GEO bulk
20	pvip1 pvip2	-0.44 >More info	-0.53 >More info	Col-0		whole rosettes	Original data	GEO bulk
21	rsa3-1 Na 24h	-0.33 >More info	-0.64 >More info	WT Na 24h	120 mM NaCl for 24 h	whole seedlings	Original data	GEO bulk
22	ACN1-2 Sucrose	-0.40 >More info	-0.57 >More info	Col-7 Sucrose			Original data	GEO bulk
23	hst5	-0.51 >More info	-0.45 >More info	Col-0			Original data	GEO bulk
24	Transgenic LEC2GR Seedling 1h Dex	-0.42 >More info	-0.54 >More info	Transgenic LEC2GR Seedling 0h Dex			Original data	GEO bulk
25	pho1	-0.43 >More info	-0.52 >More info	Col2WT			Original data	GEO bulk
26	Glyphosate EC50	-0.37 >More info	-0.57 >More info	Carrier (Glyphosate)			Original data	GEO bulk
27	bZIP1ko mutant N+Light-	-0.30 >More info	-0.63 >More info	WT-sib N+Light-		whole plant	Original data	GEO bulk
28	sav1-1 shade	-0.31 >More info	-0.61 >More info	Col-0 shade		seedlings	Original data	GEO bulk
29	seedling -S Exp	-0.14 >More info	-0.77 >More info	seedling FN Exp		seedling	Original data
30	Elevated CO2 fully expanded leaf	-0.34 >More info	-0.57 >More info	Ambient CO2 fully expanded leaf		fully expanded leaf	Original data
31	Leaf GLU1-KO	-0.40 >More info	-0.50 >More info	Leaf Col(0)		rosette leaves	Original data	GEO bulk
32	csn4-1 mutant	-0.35 >More info	-0.55 >More info	WT dark			Original data	GEO bulk
33	WT 3h -P	-0.32 >More info	-0.58 >More info	WT 3h +P	No phosphate medium	seedlings without roots	Original data	GEO bulk
34	pmr5	-0.31 >More info	-0.59 >More info	Col-0			Original data	GEO bulk
35	INA	-0.19 >More info	-0.71 >More info	CK	INA	seedling	Original data
36	UV Stress 24 h (shoot)	-0.27 >More info	-0.62 >More info	Stress mock 24 h (shoot)			Original data	Stress treatments
37	MPK6 ox Root Hypoxia	-0.14 >More info	-0.75 >More info	WT Root Normoxia (mock)	Hypoxia	Root	Original data	GEO bulk
38	pepr1-1 Pepr2-3 untreated	-0.33 >More info	-0.55 >More info	WT untreated	untreated		Original data	GEO bulk
39	Col laser microdissected 5 dpi	-0.52 >More info	-0.36 >More info	Col laser microdissected 5d UI		LMD leaf epidermal and mesophyll cells	Original data	GEO bulk
40	35S:LOB-GR mock	-0.26 >More info	-0.62 >More info	Col mock	mock	seedling	Original data	GEO bulk
41	seedling 24h after Gamma WT	-0.35 >More info	-0.53 >More info	seedling day 2 unirradiated WT	24h		Original data
42	Mock pft1 leaf	-0.19 >More info	-0.69 >More info	Mock Col-0 leaf	water	leaf	Original data	GEO bulk
43	ptpks2	-0.34 >More info	-0.53 >More info	Col-WT		leaves	Original data	GEO bulk
44	16h Col-0	-0.37 >More info	-0.50 >More info	00h Col-0			Original data	GEO bulk
45	cpr5npr1	-0.26 >More info	-0.61 >More info	WT(COL)			Original data	GEO bulk
46	Shoot -Cs	-0.23 >More info	-0.64 >More info	Control-shoot			Original data	GEO bulk
47	whole roots 140 mM NaCl 4 hour	0.35 >More info	0.52 >More info	whole roots standard			Original data	GEO bulk
48	Selenate (shoot)	-0.30 >More info	-0.56 >More info	Ws (shoot)			Original data	GEO bulk
49	Shoot Selenate	-0.30 >More info	-0.56 >More info	Shoot control	40 micromolar selenate	Shoot	Original data	GEO bulk
50	root - 04% oxygen - 30min	-0.21 >More info	-0.65 >More info	root - 21% oxygen - 30min			Original data	GEO bulk
51	Mutant ga1-5	0.32 >More info	0.53 >More info	Ler-1			Original data	Comparison of plant hormone related mutant
52	35SpBVR3	0.62 >More info	0.23 >More info	WT			Original data	GEO bulk
53	scrm-D	-0.27 >More info	-0.57 >More info	Col-0 WT		whole seedling	Original data	GEO bulk
54	WT powdery mildew	-0.27 >More info	-0.57 >More info	WT control	inoculation with the powdery mildew pathogen		Original data	GEO bulk
55	Cor 24h	-0.23 >More info	-0.61 >More info	Mock 24h	Cor		Original data	GEO bulk
56	Col-0 2HS	-0.22 >More info	-0.61 >More info	Col-0NS	2 h hypoxia stress (2HS)	7-day-old seedlings	Original data
57	CMP 4hr	-0.50 >More info	-0.32 >More info	Acetone 4hr		root	Original data	GEO bulk
58	ice1 3H Cold	-0.18 >More info	-0.64 >More info	WT 3H Cold			Original data	GEO bulk
59	seedlings by volatiles from leafminer damaged Lima bean 48h	-0.30 >More info	-0.52 >More info	seedlings by volatiles from healthy Lima bean 48h		leaves	Original data	GEO bulk
60	Whole root - S 3H	-0.31 >More info	-0.50 >More info	Whole root - S 0H			Original data	GEO bulk
61	wavy	-0.25 >More info	-0.55 >More info	WT			Original data	GEO bulk
62	SPT4-R3 seedlings0 DAS	-0.28 >More info	-0.52 >More info	Col-0 seedlings0 DAS		seedlings	Original data
63	FarRed Light 45min	0.26 >More info	0.53 >More info	White Light 45min			Original data	Light treatments
64	-Sulfate 24 h	-0.16 >More info	-0.62 >More info	Mock 24 h (1500uM sulfate)			Original data	Response to sulfate limitation
65	Ba1 UV	-0.26 >More info	-0.52 >More info	Ba1 mock	UV	seedling	Original data
66	ckh1 CK200	-0.27 >More info	-0.51 >More info	WT (Ler) CK200	cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin.	tissue culture	Original data	GEO bulk
67	smg7b-1	-0.27 >More info	-0.51 >More info	WT		whole plant	Original data	GEO bulk
68	sni1	-0.21 >More info	-0.57 >More info	WT			Original data	GEO bulk
69	FOX line K19624	-0.24 >More info	-0.53 >More info	empty vector control (T3) FOX lines			Original data	GEO bulk
70	mdh	0.14 >More info	0.63 >More info	Col			Original data	GEO bulk
71	sid2	0.22 >More info	0.54 >More info	Col-0-untreated-control	untreated	leaf tissue	Original data	GEO bulk
72	ACN1-2	-0.14 >More info	-0.62 >More info	col-7			Original data	GEO bulk
73	root - 01% oxygen - 30min	-0.19 >More info	-0.56 >More info	root - 21% oxygen - 30min			Original data	GEO bulk
74	WT NAA 2h	0.11 >More info	0.64 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
75	ice1 control	-0.16 >More info	-0.59 >More info	WT control			Original data	GEO bulk
76	ice1 6H Cold	-0.14 >More info	-0.60 >More info	WT 6H Cold			Original data	GEO bulk
77	cpr5	-0.22 >More info	-0.52 >More info	WT(COL)			Original data	GEO bulk
78	20m.KCl	0.16 >More info	0.57 >More info	To.	KCl	14 day old Roots	Original data	GEO bulk
79	cpr5npr1svi1	-0.17 >More info	-0.55 >More info	WT(COL)			Original data	GEO bulk
80	phyB mutant 22C 10hrs	0.19 >More info	0.53 >More info	L22-10hrs		whole plant excluding roots	Original data	GEO bulk
81	ABA control	-0.02 >More info	0.74 >More info	No ABA control			Original data	GEO bulk
82	cop1 Seedling BL+ABA	-0.16 >More info	-0.54 >More info	WT Seedling BL+ABA			Original data	GEO bulk
83	IAA7mII over-expressor IAA Treated	0.01 >More info	0.69 >More info	empty vector IAA Treated			Original data	GEO bulk
84	mbd6 mutant thaliana 10-day-old seedling	-0.19 >More info	-0.51 >More info	WT thaliana 10-day-old seedling		10 days old seedling	Original data
85	Ws-2 high light	-0.14 >More info	-0.54 >More info	Ws-2 low light			Original data	GEO bulk
86	Sepals stage15	-0.55 >More info	-0.12 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
87	root - 08% oxygen - 2h	0.08 >More info	-0.75 >More info	root - 21% oxygen - 2h			Original data	GEO bulk
88	D2O	-0.16 >More info	-0.51 >More info	H2O		seedling	Original data	GEO bulk
89	Estradiol4 days	0.05 >More info	0.61 >More info	Col			Original data	GEO bulk
90	long 17-degree-	-0.11 >More info	-0.55 >More info	control long			Original data	GEO bulk
91	root - 04% oxygen - 2h	0.15 >More info	-0.81 >More info	root - 21% oxygen - 2h			Original data	GEO bulk
92	estradiol induced LEC1	0.05 >More info	0.61 >More info	control			Original data	GEO bulk
93	pmr5 pmr6	-0.15 >More info	-0.51 >More info	Col-0			Original data	GEO bulk
94	Col-0 wt Hypoxic	-0.04 >More info	-0.61 >More info	Col-0 wt Aerobic	hypoxic treatment		Original data	GEO bulk
95	siliques AtHb1 control	0.13 >More info	0.52 >More info	siliques WT control	control	silique	Original data	GEO bulk
96	Aerobic prt6	0.17 >More info	-0.82 >More info	Aerobic Col-0	aerobic (normal) conditions	seedlings	Original data	GEO bulk
97	Night Time Treatment	-0.52 >More info	-0.12 >More info	Night Time Control	1hr white light pulse	aerial rosette	Original data
98	camta3-2	-0.13 >More info	-0.51 >More info	WT			Original data	GEO bulk
99	ged1 seedlings	-0.11 >More info	-0.53 >More info	Ws seedlings			Original data	GEO bulk
100	Ws seedlings	0.11 >More info	0.53 >More info	ged1 seedlings			Original data	GEO bulk
101	bio4-1 mutant watered00µM biotin leaves	0.09 >More info	0.55 >More info	bio4-1 mutant leaves		leaves	Original data	GEO bulk
102	bri1-116	-0.10 >More info	0.73 >More info	Col		seedling	Original data	GEO bulk
103	seed germinating in countinuous light 24h SL	-0.05 >More info	0.67 >More info	Control for tissue data		seed	Original data	GEO bulk
104	opr3 OPDA 8 h	-0.12 >More info	-0.50 >More info	opr3 0 h			Original data	GEO bulk
105	WT Root Hypoxia	-0.03 >More info	-0.58 >More info	WT Root Normoxia (mock)	Hypoxia	Root	Original data	GEO bulk
106	Stem tissue 5 days NAA	-0.06 >More info	-0.54 >More info	Stem tissue T0	Stem tissue with NAA treatment	Stem tissue with NAA treatment	Original data	GEO bulk
107	Cd 24h root	0.09 >More info	0.51 >More info	WT-Untreated		Shoot	Original data	GEO bulk
108	ice1 24H Cold	-0.03 >More info	-0.57 >More info	WT 24H Cold			Original data	GEO bulk
109	Col-O low light	-0.60 >More info	0.02 >More info	Col-O bule light			Original data	GEO bulk
110	Laer pretreat GA Flg22 1h	-0.13 >More info	0.71 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
111	short 17-degree-	-0.03 >More info	-0.54 >More info	control short			Original data	GEO bulk
112	IAA 2h	0.58 >More info	-0.01 >More info	control 2h		root	Original data	GEO bulk
113	Uniconazole 3 h	-0.04 >More info	-0.51 >More info	Mock 3 h			Original data	Effect of GA inhibitors on seedlings
114	mutant acs9B (single mutant)	0.51 >More info	0.03 >More info	col control (single mutant)			Original data	GEO bulk
115	Aerobic e1 ate2	0.21 >More info	-0.75 >More info	Aerobic Col-0	aerobic (normal) conditions	seedlings	Original data	GEO bulk
116	root - 08% oxygen - 30min	0.11 >More info	-0.64 >More info	root - 21% oxygen - 30min			Original data	GEO bulk
117	35S::HRE2 Aerobic	0.01 >More info	0.52 >More info	Col-0 wt Aerobic	untreated control		Original data	GEO bulk
118	mbd4 mutant thaliana 10-day-old seedling	-0.01 >More info	-0.52 >More info	WT thaliana 10-day-old seedling		10 days old seedling	Original data
119	root - 01% oxygen - 2h	0.16 >More info	-0.69 >More info	root - 21% oxygen - 2h			Original data	GEO bulk
120	Col BTH	-0.15 >More info	0.67 >More info	Col		rosettes	Original data	GEO bulk
121	CCA1-ox 6am non-polysomal	0.01 >More info	0.51 >More info	WT 6am non-polysomal		aerial part	Original data
122	piffq 2d WL	0.00 >More info	0.51 >More info	WT 2d WL		whole seedling	Original data	GEO bulk
123	pab polysome	-0.03 >More info	0.53 >More info	WT polysome		seedling shoot/aerial seedling	Original data
124	E.orontii Infection 6 h	0.06 >More info	-0.55 >More info	Uninfection 6 h			Original data	Elicitor treatments
125	Heat shock optimum	-0.18 >More info	0.65 >More info	Heat shock baseline	Photosynthesis at optimum temperature	leaf first fully expanded	Original data	GEO bulk
126	shoots bhlh100/101 100uM Fe	0.08 >More info	-0.55 >More info	shoots WT 100uM Fe	100uM Fe	shoots	Original data	GEO bulk
127	gpa1-4/agb1-2 ozone 2d	-0.14 >More info	0.60 >More info	Col ozone 2d	ozone		Original data	GEO bulk
128	IAA 4h	0.56 >More info	-0.11 >More info	control 4h		root	Original data	GEO bulk
129	35S:PCO1 hypoxia	-0.11 >More info	0.56 >More info	WT hypoxia		whole rosette	Original data
130	Chemically	-0.08 >More info	0.51 >More info	Solvent	treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid	whole seedlings	Original data
131	root - 01% oxygen - 48h	0.11 >More info	-0.53 >More info	root - 21% oxygen - 48h			Original data	GEO bulk
132	short 12-degree-	0.09 >More info	-0.50 >More info	control short			Original data	GEO bulk
133	eds16 whole leaf 7d UI	-0.15 >More info	0.55 >More info	Col whole leaf 7d UI		whole leaf	Original data	GEO bulk
134	WT NAA 1h	-0.12 >More info	0.50 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
135	Col0-PsmES4326-24hpi	-0.24 >More info	0.61 >More info	Col0-mock-24hpi		leaf	Original data	GEO bulk
136	root - 08% oxygen - 48h	0.25 >More info	-0.61 >More info	root - 21% oxygen - 48h			Original data	GEO bulk
137	Col in Pi deficiency medium	0.28 >More info	-0.62 >More info	Col in control medium		root	Original data	GEO bulk
138	Shoot apex inflorescence (after bolting)	-0.32 >More info	0.65 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
139	root - 04% oxygen - 48h	0.42 >More info	-0.71 >More info	root - 21% oxygen - 48h			Original data	GEO bulk
140	coi1	-0.26 >More info	0.50 >More info	Col-0		Leaves	Original data	GEO bulk
141	Leafminer damaged seedlings	-0.33 >More info	0.56 >More info	Healthy seedlings		leaves	Original data	GEO bulk