4.0:Analysis result - correlation network
Home
Method
Manual
History
Module-based correlation network(MCN) centered on FLIGHT TAGESB plate
> How to read results
Simple
All
>>Show Interactive view (test)
List of experiments correlated with "FLIGHT TAGESB plate"
Download transcriptome of top 30
Score
Experiment
Correlation from
FLIGHT TAGESB plate
Correlation to
FLIGHT TAGESB plate
Control Experiment
Genotype
Treatment
Tissue
Link to
original data
Experimental
Category
Data set
Details
1
FLIGHT TAGESB plate
1.00
>More info
1.00
>More info
GROUND CONTROL TAGESB plate
Original data
2
SOS1 100mM NaCl
0.57
>More info
0.55
>More info
Ws 100mM NaCl
100mM NaCl
leaf
Original data
GEO bulk
3
OsRLCK253 expressing
-0.30
>More info
-0.74
>More info
WT
seedlings
Original data
GEO bulk
4
WT 3H Cold
0.28
>More info
0.75
>More info
WT control
Original data
GEO bulk
5
M6PR transgenic 0mM NaCl
0.43
>More info
0.58
>More info
Ws 0mM NaCl
0mM NaCl
leaf
Original data
GEO bulk
6
SOS1 0mM NaCl
0.39
>More info
0.61
>More info
Ws 0mM NaCl
0mM NaCl
leaf
Original data
GEO bulk
7
Col BTH
0.33
>More info
0.67
>More info
Col
rosettes
Original data
GEO bulk
8
Shoot submergence 24h
0.40
>More info
0.59
>More info
Shoot light control
24 h submergence in darkness
whole shoot
Original data
GEO bulk
9
FLIGHT TAGESB plate6 ROOTS
0.21
>More info
0.77
>More info
GROUND CONTROL TAGESB plate6 ROOTS
plant tissue
Original data
10
FLIGHT TAGES 2B plate6 HYPOCOTYLS
0.25
>More info
0.71
>More info
GROUND CONTROL TAGES 2B plate6 HYPOCOTYLS
plant tissue
Original data
11
rosette Light Wounded
0.31
>More info
0.63
>More info
rosette Light Control
Original data
GEO bulk
12
SCR-GR Time 1H Dex
0.39
>More info
0.54
>More info
SCR-GR Time 0H Dex
Dex media for 1 hour
Original data
GEO bulk
13
Heat shock optimum
0.27
>More info
0.65
>More info
Heat shock baseline
Photosynthesis at optimum temperature
leaf first fully expanded
Original data
GEO bulk
14
rosette leaves fdh
0.28
>More info
0.63
>More info
rosette leaves WT
Young rosette leaves 2mm to 1cm
Original data
GEO bulk
15
bHLH122 ox
-0.26
>More info
-0.65
>More info
WT Col-0
bHLH122 overexpression
shoot
Original data
GEO bulk
16
Shoot dark control 24h
0.32
>More info
0.59
>More info
Shoot light control
24 h non-submerged dark condition
whole shoot
Original data
GEO bulk
17
Polysomal RNA 35S:HF-RPL18 cold
0.36
>More info
0.54
>More info
Polysomal RNA csp1 cold
12h cold (4C)
rosettes
Original data
GEO bulk
18
detached inflorescences 24h
0.40
>More info
0.50
>More info
detached inflorescences 0h
detached dark-held immature inflorescences
inflorescences from the primary bolts
Original data
GEO bulk
19
triploid female excess
-0.24
>More info
-0.66
>More info
tetraploid
Original data
GEO bulk
20
3x(m)
0.28
>More info
0.62
>More info
2x
two week old seedlings
Original data
21
Laer pretreat GA Flg22 1h
0.19
>More info
0.71
>More info
Laer pretreat water control
leaf discs
Original data
GEO bulk
22
Rose Bengal 0.5 uM
0.31
>More info
0.59
>More info
Control RB and PER
Rose Bengal
Original data
23
seedlings-week-old RECA1-overexpressing
transgenic
0.33
>More info
0.56
>More info
seedlings-week-old Col-0
seedlings
Original data
24
FLIGHT TAGESB plate6 SHOOTS
0.34
>More info
0.55
>More info
GROUND CONTROL TAGESB plate6 SHOOTS
plant tissue
Original data
25
Te 8h
0.36
>More info
0.53
>More info
Te CA
Leaves
Original data
26
M6PR transgenic leaf 0mM NaCl
0.24
>More info
0.62
>More info
Col leaf 0mM NaCl
leaf
Original data
GEO bulk
27
TNT-seedlings
0.14
>More info
0.71
>More info
DMF-control-seedlings
TNT-treated-seedlings
whole plant
Original data
GEO bulk
28
root protoplasts 40 mM NaCl
0.25
>More info
0.60
>More info
whole roots 40 mM NaCl
protoplasting and FACS sorting
Original data
GEO bulk
29
Protoplast Induced
0.17
>More info
0.67
>More info
Uninduced
Original data
GEO bulk
30
Light
0.31
>More info
0.53
>More info
Control
Original data
GEO bulk
31
OsSAP11 expressing
-0.17
>More info
-0.67
>More info
WT
seedlings
Original data
GEO bulk
32
opr3 JA 0.5 h
0.23
>More info
0.61
>More info
opr3 0 h
Original data
GEO bulk
33
ein2 1% sucrose 14-day-old
-0.27
>More info
-0.56
>More info
Col-0 1% sucrose 14-day-old
Original data
GEO bulk
34
seedling 12h after HZE WT
0.27
>More info
0.56
>More info
seedling day 1 unirradiated WT
12h
Original data
35
Atss3 Light4
-0.26
>More info
-0.57
>More info
Atss3 Dark0.5
Original data
GEO bulk
36
Col-0 low oxygen
0.32
>More info
0.50
>More info
Col-0
Original data
GEO bulk
37
toc1-1-77hr
0.15
>More info
0.67
>More info
WT-untreated-77hr
none
seedlings aerial tissue
Original data
GEO bulk
38
1 h Light Total RNA
-0.17
>More info
-0.65
>More info
1h Dark Total RNA
1 h light control
whole seedlings
Original data
GEO bulk
39
2hr continuous KNO3 ECR cell
0.30
>More info
0.52
>More info
2hr KCl control ECR cell
Epidermis&Cortex root cells
Original data
GEO bulk
40
Shoot dark control 7h
0.23
>More info
0.59
>More info
Shoot light control
7 h non-submerged dark condition
whole shoot
Original data
GEO bulk
41
rosette Dark Wounded
0.18
>More info
0.63
>More info
rosette Dark Control
Original data
GEO bulk
42
toc1-1-89hr
-0.24
>More info
-0.57
>More info
WT-untreated-89hr
none
seedlings aerial tissue
Original data
GEO bulk
43
Col-0 C2H4 24h
0.27
>More info
0.53
>More info
Col-0 air
4 hour ethylene gas (10 ppm)
Original data
GEO bulk
44
ptpks2
-0.29
>More info
-0.51
>More info
Col-WT
leaves
Original data
GEO bulk
45
mbd11 mutant thaliana 10-day-old seedling
0.28
>More info
0.52
>More info
WT thaliana 10-day-old seedling
10 days old seedling
Original data
46
Col(gl) leaf 0mM NaCl
0.17
>More info
0.62
>More info
Col leaf 0mM NaCl
leaf
Original data
GEO bulk
47
oas-a1.1 Cd 24h
0.23
>More info
0.56
>More info
Cd 24h root
Shoot
Original data
GEO bulk
48
Col(gl) 0mM NaCl
0.17
>More info
0.62
>More info
Col 0mM NaCl
0mM NaCl
leaf
Original data
GEO bulk
49
low CO2 + light
0.20
>More info
0.59
>More info
normal CO2 + light
Original data
GEO bulk
50
cpr5scv1
0.26
>More info
0.53
>More info
WT(COL)
Original data
GEO bulk
51
Leafminer damaged seedlings
0.23
>More info
0.56
>More info
Healthy seedlings
leaves
Original data
GEO bulk
52
IAA7mII over-expressor IAA Treated
0.10
>More info
0.69
>More info
empty vector IAA Treated
Original data
GEO bulk
53
flu over-tAPX
0.20
>More info
0.58
>More info
WT Col
Original data
GEO bulk
54
D2O
0.27
>More info
0.51
>More info
H2O
seedling
Original data
GEO bulk
55
Day Time Treatment
-0.28
>More info
-0.50
>More info
Day Time Control
1hr white light pulse
aerial rosette
Original data
56
seedling 6h after HZE WT
0.19
>More info
0.59
>More info
seedling day 1 unirradiated WT
6h
Original data
57
shoot-10 μM DEX- 6 hr
0.21
>More info
0.57
>More info
shoot-10 μM DEX- 0 hr
SHR induction by DEX
whole shoot
Original data
58
flu dark 8hours/30 minute light
0.12
>More info
0.65
>More info
col dark 8hours/30 minute light
Original data
GEO bulk
59
low CO2 + dark
0.25
>More info
0.52
>More info
normal CO2 + light
Original data
GEO bulk
60
1 h Light IP RNA
-0.14
>More info
-0.63
>More info
1h Dark IP RNA
1 h light control
whole seedlings
Original data
GEO bulk
61
ACC 3 h
0.24
>More info
0.51
>More info
Mock 3 h
Original data
Basic hormone treatment of seedlings
62
AtMYB30-ox 2-4h Xanthomonas
0.24
>More info
0.51
>More info
WT 2-4h Xanthomonas
Original data
GEO bulk
63
Seedling-HeatStressed POLYSOMESmRNA
0.18
>More info
0.57
>More info
Seedling-control POLYSOMESmRNA
seedling
Original data
64
ein2-1 24hpi A. brassicicola
-0.23
>More info
-0.52
>More info
Col-0 9 hpi A. brassicicola
3rd-5th true leaves
Original data
65
root cap pGL2 8h BL
0.53
>More info
0.21
>More info
root cap pGL2 0h BL
brassinosteroid
root
Original data
66
Col light-dark EtOH
0.52
>More info
0.22
>More info
Col light-dark Mock
2.5% ethanol
Original data
GEO bulk
67
Ba1 UV
0.13
>More info
0.61
>More info
Ba1 mock
UV
seedling
Original data
68
Leafminer locally damaged thaliana seedlings
0.23
>More info
0.50
>More info
Undamaged thaliana seedlings
locally damaged by leafminer
leaves
Original data
GEO bulk
69
leaf blade in FRD
0.16
>More info
0.56
>More info
leaf blade in WL
leaf blades
Original data
GEO bulk
70
leaf blade in D
0.14
>More info
0.58
>More info
leaf blade in WL
leaf blades
Original data
GEO bulk
71
npr1 sni1 brca2a SA
-0.13
>More info
-0.59
>More info
npr1 sni1 SA
salicylic acid
seedling
Original data
GEO bulk
72
1h +Pi
0.00
>More info
-0.72
>More info
1h -Pi
root
Original data
GEO bulk
73
4C 1h
0.11
>More info
0.61
>More info
4C 0h
Original data
GEO bulk
74
sfr6 drought
-0.09
>More info
-0.63
>More info
WT drought
All aerial tissue
Original data
GEO bulk
75
Col0-PsmES4326-24hpi
0.10
>More info
0.61
>More info
Col0-mock-24hpi
leaf
Original data
GEO bulk
76
anti-sense for AtAOX1a
0.19
>More info
0.52
>More info
WT
Original data
GEO bulk
77
35S:RPS4 eds1-2 2h
-0.07
>More info
-0.64
>More info
35S:RPS4 2h
leaves
Original data
78
siliques AtHb1 control
0.18
>More info
0.52
>More info
siliques WT control
control
silique
Original data
GEO bulk
79
NJ15
0.20
>More info
0.50
>More info
mock
sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates
Seedlings
Original data
80
seedlings protease IV
0.20
>More info
0.50
>More info
seedlings nontreated control
whole seedling
Original data
81
Seedling-HeatStressed TOTALmRNA
0.15
>More info
0.54
>More info
Seedling-control TOTALmRNA
seedling
Original data
82
Mutant clv3-7(flower)
0.58
>More info
0.11
>More info
Flowers stage12
Original data
Developmental series; organs / tissues at different ages
83
12h-DC3000 avrRpm1
0.08
>More info
0.61
>More info
12h-DC3000
leaves
Original data
GEO bulk
84
IXB induced
0.12
>More info
0.56
>More info
Methanol IXB
Suspension cells
Original data
GEO bulk
85
ABA JA 24h
0.15
>More info
0.53
>More info
EtOH 24h
24hr
Original data
GEO bulk
86
Leaf wounded
-0.03
>More info
0.71
>More info
Leaf control
vegetative leaf
Original data
GEO bulk
87
WT+H2O2
0.07
>More info
0.61
>More info
WT
H2O2
Original data
GEO bulk
88
Col-0 shade
0.18
>More info
0.50
>More info
Col-0 light
seedlings
Original data
GEO bulk
89
Col 8h
0.11
>More info
0.57
>More info
Col CA
Leaves
Original data
90
Mutant lwd1_lwd2
0.11
>More info
0.56
>More info
Wildtype for phy mutants
Original data
GEO bulk
91
LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)
0.11
>More info
0.56
>More info
LWD1 and LWD2 in photoperiod regulation (wt )
Original data
GEO bulk
92
rosette leaves lcr
0.13
>More info
0.54
>More info
rosette leaves WT
Young rosette leaves 2mm to 1cm
Original data
GEO bulk
93
cpr5npr1svi1
0.15
>More info
0.52
>More info
WT(COL)
Original data
GEO bulk
94
3x(p)
0.13
>More info
0.54
>More info
2x
two week old seedlings
Original data
95
Ws leaf 100mM NaCl
0.06
>More info
0.61
>More info
Ws leaf 0mM NaCl
leaf
Original data
GEO bulk
96
30m light
-0.06
>More info
-0.61
>More info
before light
whole seedlings
Original data
GEO bulk
97
Ws 100mM NaCl
0.06
>More info
0.61
>More info
Ws 0mM NaCl
100mM NaCl
leaf
Original data
GEO bulk
98
WT+chitooctaose
0.11
>More info
0.55
>More info
WT+water
chitooctaose
seedlings
Original data
GEO bulk
99
35S::MBF1c
0.11
>More info
0.55
>More info
control
Original data
GEO bulk
100
flu
0.09
>More info
0.57
>More info
WT Col
Original data
GEO bulk
101
4C 2h(SOIL)
-0.03
>More info
0.69
>More info
4C 0h(SOIL)
Original data
GEO bulk
102
max4 hypocotyl
0.14
>More info
0.51
>More info
wt hypocotyl
hypocotyl
Original data
GEO bulk
103
CeO2 germinant
-0.15
>More info
-0.50
>More info
Millipore Water germinant
CeO2
seedling
Original data
104
aerial organ callus inducing medium 12 h
0.07
>More info
0.55
>More info
aerial organ callus inducing medium 0 h
12 hours after incubating on callus inducing medium
aerial organ explants
Original data
GEO bulk
105
10min Reillumination Total RNA
-0.02
>More info
-0.60
>More info
1h Dark Total RNA
1 h darkness plus 10 min reillumination
whole seedlings
Original data
GEO bulk
106
pepr1-1 Pepr2-3 +Pep2 2h
-0.12
>More info
-0.50
>More info
WT +Pep2 2h
Pep2
Original data
GEO bulk
107
root cap pGL2 3h BL
0.51
>More info
0.10
>More info
root cap pGL2 0h BL
brassinosteroid
root
Original data
108
Imbibed 1 h (seed)
0.08
>More info
0.53
>More info
Dry seed
Original data
Time course of early seed germination
109
A. thaliana-A. lyrata hybrid
-0.10
>More info
-0.51
>More info
A. thaliana
mature leaves before flowering
Original data
GEO bulk
110
ataf1-1 mutant Col-0 Bgh inoculated
0.08
>More info
0.52
>More info
ataf1-1 mutant Col-0 Un-inoculated
Original data
GEO bulk
111
WT 6H Cold
0.02
>More info
0.58
>More info
WT control
Original data
GEO bulk
112
Cycloheximide 3 h
0.06
>More info
0.53
>More info
Mock 3 h
Original data
Effect of other inhibitors on seedlings
113
sid2-avrB-6h
0.01
>More info
0.58
>More info
Col-0-avrB-6h
avrB
leaf tissue
Original data
GEO bulk
114
AgNO3 3 h
0.06
>More info
0.52
>More info
Mock 3 h
Original data
Effect of ethylene inhibitors on seedlings
115
Red/FR Light45min
0.06
>More info
0.52
>More info
FarRed Light 45min
Original data
Light treatments
116
HARAP aerobic
-0.06
>More info
-0.52
>More info
WT aerobic
aerobic
Original data
GEO bulk
117
bri1-116
-0.15
>More info
0.73
>More info
Col
seedling
Original data
GEO bulk
118
GST NPP1 4 h (leaf)
0.03
>More info
0.54
>More info
Mock 4 h (leaf)
Original data
Elicitor treatments
119
petiole in D
0.07
>More info
0.50
>More info
petiole in WL
petioles
Original data
GEO bulk
120
toc1-1-53hr
0.07
>More info
0.50
>More info
WT-untreated-53hr
none
seedlings aerial tissue
Original data
GEO bulk
121
gpa1-4/agb1-2 ozone 2d
-0.02
>More info
-0.55
>More info
Col ozone 2d
ozone
Original data
GEO bulk
122
CMV-A2b mutant
0.01
>More info
0.56
>More info
Mock-At
Aerial tissues
Original data
GEO bulk
123
Col-0 9 hpi A. brassicicola
-0.00
>More info
0.57
>More info
Col-0 9 hpi mock
3rd-5th true leaves
Original data
124
Col leaf 100mM NaCl
0.04
>More info
0.52
>More info
Col leaf 0mM NaCl
leaf
Original data
GEO bulk
125
Col leaf 100mM NaCl
0.04
>More info
0.52
>More info
Col leaf 0mM NaCl
leaf
Original data
GEO bulk
126
Col 100mM NaCl
0.04
>More info
0.52
>More info
Col 0mM NaCl
100mM NaCl
leaf
Original data
GEO bulk
127
erf5 erf6
-0.05
>More info
-0.51
>More info
WT+water
water
seedlings
Original data
GEO bulk
128
seed germinating in countinuous light 24h SL
-0.11
>More info
0.67
>More info
Control for tissue data
seed
Original data
GEO bulk
129
Col ozone 3h
0.06
>More info
0.50
>More info
Col clean-air 3h
ozone
Original data
GEO bulk
130
Cor hrpS 10h
0.02
>More info
0.54
>More info
Mock 10h
Cor hrpS
Original data
GEO bulk
131
Atss3 Light1
-0.04
>More info
-0.51
>More info
Atss3 Dark0.5
Original data
GEO bulk
132
abi1 hypocotyl
-0.13
>More info
0.68
>More info
Ler hypocotyl
hypocotyl
Original data
GEO bulk
133
col-5 hrpA 12h
0.03
>More info
0.52
>More info
col-5 MgCl2 12h
Whole leaf
Original data
GEO bulk
134
Seedling KUA1-IOX est
-0.00
>More info
0.55
>More info
Seedling KUA1-IOX mock
Original data
135
Shoot -Cs
-0.02
>More info
0.57
>More info
Control-shoot
Original data
GEO bulk
136
vip3
0.52
>More info
0.02
>More info
WT
Original data
GEO bulk
137
TA induced
0.00
>More info
0.54
>More info
Methanol TA
Suspension cells
Original data
GEO bulk
138
Nicotinamide-73hr
0.00
>More info
0.54
>More info
WT-untreated-73hr
nicotinamide
aerial tissue
Original data
GEO bulk
139
Nicotinamide-49hr
0.00
>More info
0.54
>More info
WT-untreated-49hr
nicotinamide
aerial tissue
Original data
GEO bulk
140
pif5 high R/FR
-0.01
>More info
-0.53
>More info
Col-0 high R/FR
high R/FR
seedlings
Original data
GEO bulk
141
petiole in FRD
-0.01
>More info
0.54
>More info
petiole in WL
petioles
Original data
GEO bulk
142
toc1-1-73hr
0.03
>More info
0.50
>More info
WT-untreated-73hr
none
seedlings aerial tissue
Original data
GEO bulk
143
2hr transitory KNO3 PrR cell
-0.05
>More info
0.58
>More info
2hr KCl control PrR cell
Protoplasted root cells
Original data
GEO bulk
144
Nicotinamide-69hr
-0.03
>More info
0.55
>More info
WT-untreated-69hr
nicotinamide
aerial tissue
Original data
GEO bulk
145
coi1-2
0.01
>More info
0.51
>More info
Col-0 mock
Whole seedling
Original data
GEO bulk
146
WT 3h -P
-0.01
>More info
0.51
>More info
WT 3h +P
No phosphate medium
seedlings without roots
Original data
GEO bulk
147
60m light
0.01
>More info
-0.51
>More info
before light
whole seedlings
Original data
GEO bulk
148
E.coli 0157 H7 7h
-0.06
>More info
0.55
>More info
Mock 7h
E.coli 0157 H7
Original data
GEO bulk
149
Nicotinamide-53hr
-0.10
>More info
0.59
>More info
WT-untreated-53hr
nicotinamide
aerial tissue
Original data
GEO bulk
150
P.p 10.5hai
-0.02
>More info
0.50
>More info
At-Control
roots
Original data
GEO bulk
151
chito-tetramer
-0.03
>More info
0.51
>More info
Col Mock
Original data
GEO bulk
152
WT hypoxia
-0.04
>More info
0.51
>More info
WT normoxia
whole rosette
Original data
153
myb61 xylem
-0.14
>More info
0.61
>More info
wt xylem
xylem
Original data
GEO bulk
154
Shoot apex inflorescence (after bolting)
-0.19
>More info
0.65
>More info
Control for tissue data
Original data
Developmental series; organs / tissues at different ages
155
WT 2-4h Xanthomonas
-0.05
>More info
0.51
>More info
WT T0
Original data
GEO bulk
156
SCR-GR Time 3H Dex
0.54
>More info
-0.10
>More info
SCR-GR Time 0H Dex
Dex media for 3 hours
Original data
GEO bulk
157
Selenate (root)
-0.19
>More info
0.62
>More info
Ws (root)
Original data
GEO bulk
158
Root Selenate
-0.19
>More info
0.62
>More info
Root control
40 micromolar selenate
Root
Original data
GEO bulk
159
AVG 3 h
0.11
>More info
-0.53
>More info
Mock 3 h
Original data
Effect of ethylene inhibitors on seedlings
160
ABA control
-0.13
>More info
0.55
>More info
No ABA control
Original data
GEO bulk
161
35S-MIF1 light grown
-0.17
>More info
0.57
>More info
Light-grown WT control
Original data
GEO bulk
162
aba1 hypocotyl
-0.18
>More info
0.56
>More info
Ler hypocotyl
hypocotyl
Original data
GEO bulk
163
PNO8 12 h
-0.12
>More info
0.50
>More info
Mock 12 h
Original data
Effect of other inhibitors on seedlings
164
GR:KAN1 DEX Shade
-0.53
>More info
0.16
>More info
GR:KAN1 Mock Shade
seedlings
Original data
165
Flagellin 4 h (leaf)
-0.13
>More info
0.50
>More info
Mock 4 h (leaf)
Original data
Elicitor treatments
166
ahg1-1
-0.21
>More info
0.58
>More info
ABA control
Original data
GEO bulk
167
sfr6 cold
-0.14
>More info
0.50
>More info
WT cold
All aerial tissue
Original data
GEO bulk
168
ANAC102 knock-out low oxygen
0.21
>More info
-0.53
>More info
Col-0 low oxygen
Original data
GEO bulk
169
frb1 mutant
-0.21
>More info
0.51
>More info
WT
whole seedling
Original data
GEO bulk
170
cat2-2; 8h switch to ambient CO2 concentrations;
-0.21
>More info
0.51
>More info
WT; 8h switch to ambient CO2 concentrations;
2 whole rosettes
Original data
171
CCA1-ox 6am non-polysomal
-0.26
>More info
0.51
>More info
WT 6am non-polysomal
aerial part
Original data
172
dde2-2 9 hpi A. brassicicola
-0.33
>More info
0.54
>More info
Col-0 9 hpi mock
3rd-5th true leaves
Original data