4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Dark 44min pls RedLigh 1min
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List of experiments correlated with "Dark 44min pls RedLigh 1min "  Help Download transcriptome of top 30
Score Experiment Correlation from
Dark 44min pls RedLigh 1min 		Correlation to
Dark 44min pls RedLigh 1min 		Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Dark 44min pls RedLigh 1min 1.00 >More info 1.00 >More info Dark 45 min Original data Light treatments
2 Dark 40 min pls UV-A 5 min 0.95 >More info 0.94 >More info Dark 45 min Original data Light treatments
3 WT Red light 1h 0.88 >More info 0.89 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
4 Dark 40min pls UV-AB 5min 0.93 >More info 0.83 >More info Dark 45 min Original data Light treatments
5 Light 0.5h polysome-bound 0.88 >More info 0.82 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
6 Light 0.5h steady-state 0.86 >More info 0.83 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
7 2d dark-grown WT(Col-0)/1 hr red light 0.85 >More info 0.82 >More info 2d dark-grown WT seedling Original data GEO bulk
8 FarRed Light 45min -0.64 >More info -0.84 >More info White Light 45min Original data Light treatments
9 Light 4h steady-state 0.82 >More info 0.64 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
10 Red/FR Light 4 h -0.70 >More info -0.75 >More info FarRed Light 4 h Original data Light treatments
11 Light 4h polysome-bound 0.83 >More info 0.62 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
12 FarRed Light 4 h 0.65 >More info 0.73 >More info White Light 4 h Original data Light treatments
13 Blue Light 4 h 0.58 >More info 0.76 >More info White Light 4 h Original data Light treatments
14 Red Light 4 h -0.67 >More info -0.61 >More info White Light 4 h Original data Light treatments
15 WT Red light 18h 0.78 >More info 0.45 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
16 shl-2 Pool -0.63 >More info -0.57 >More info Ler Pool seedling Original data GEO bulk
17 WT(Ler) Rc50 0.71 >More info 0.46 >More info WT(Ler) Dark Original data GEO bulk
18 Dark 4 h pls RedLight 1min 0.60 >More info 0.56 >More info Dark 4 h Original data Light treatments
19 etiolated cop1BBX22-GFPox 0.74 >More info 0.42 >More info etiolated Col-0 whole seedlings Original data GEO bulk
20 Night Time Treatment 0.56 >More info 0.58 >More info Night Time Control 1hr white light pulse aerial rosette Original data
21 Col-0 shade -0.64 >More info -0.50 >More info Col-0 light seedlings Original data GEO bulk
22 Dark 4 h pls UV-AB 5min 0.71 >More info 0.43 >More info Dark 4 h Original data Light treatments
23 WT(Ler) Rc15 0.66 >More info 0.47 >More info WT(Ler) Dark Original data GEO bulk
24 WT Rc50 0.70 >More info 0.43 >More info WT Dark red light whole seedling Original data GEO bulk
25 phyAphyB Dark -0.65 >More info -0.47 >More info phyB Dark Original data GEO bulk
26 phyB Dark 0.66 >More info 0.45 >More info WT(Ler) Dark Original data GEO bulk
27 petiole in FRD -0.64 >More info -0.45 >More info petiole in WL petioles Original data GEO bulk
28 60m light 0.50 >More info 0.59 >More info before light whole seedlings Original data GEO bulk
29 low R/FR JA spray -0.53 >More info -0.53 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
30 WT Seedling BL 0.61 >More info 0.45 >More info WT Seedling Dark Original data GEO bulk
31 csn5 (csn5a-2 csn5b) dark 0.67 >More info 0.38 >More info WT dark Original data GEO bulk
32 csn4-1 mutant 0.67 >More info 0.38 >More info WT dark Original data GEO bulk
33 24h volatiles Sm. R3089 -0.47 >More info -0.57 >More info 24h untreated whole seedling Original data GEO bulk
34 csn3-1 dark 0.67 >More info 0.36 >More info WT dark Original data GEO bulk
35 Dark 4 h pls UV-A 5 min 0.55 >More info 0.47 >More info Dark 4 h Original data Light treatments
36 rosettes myoox drought 0.45 >More info 0.56 >More info rosettes myoox watered Original data GEO bulk
37 12h volatiles Sm. R3089 -0.46 >More info -0.55 >More info 12h untreated whole seedling Original data GEO bulk
38 Red Light 45min -0.52 >More info -0.48 >More info White Light 45min Original data Light treatments
39 rosettes WT drought 0.40 >More info 0.60 >More info rosettes WT watered Original data GEO bulk
40 aerial organ callus inducing medium 12 h -0.60 >More info -0.39 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
41 Heat and anoxia 0.56 >More info 0.43 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
42 Heat 0.55 >More info 0.44 >More info Control 90 minutes at 38°C. Original data GEO bulk
43 msg2 -0.64 >More info -0.34 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
44 seedling 24h after Gamma atm-1 0.62 >More info 0.34 >More info seedling day 2 unirradiated atm-1 24h Original data
45 NJ15 0.19 >More info 0.77 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
46 sfr3 control 0.53 >More info 0.42 >More info WT control All aerial tissue Original data GEO bulk
47 atmyc2 cop1 Seedling BL 0.55 >More info 0.38 >More info WT Seedling BL Original data GEO bulk
48 piffq FR 3h 0.57 >More info 0.36 >More info WT FR 3h whole seedling Original data GEO bulk
49 seedling 24h after Gamma WT 0.57 >More info 0.36 >More info seedling day 2 unirradiated WT 24h Original data
50 Anoxia 0.64 >More info 0.29 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
51 Day Time Treatment 0.54 >More info 0.38 >More info Day Time Control 1hr white light pulse aerial rosette Original data
52 MYB12OX/tt4 -0.53 >More info -0.39 >More info Col-0 aerial part Original data
53 Col-0 Mock Shade -0.59 >More info -0.33 >More info Col-0 Mock WL seedlings Original data
54 30m light 0.50 >More info 0.42 >More info before light whole seedlings Original data GEO bulk
55 GV3101 3hpi -0.63 >More info -0.28 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
56 msg2-BR -0.63 >More info -0.28 >More info BR BR dark-grown seedlings Original data GEO bulk
57 Col-0 DEX Shade -0.64 >More info -0.27 >More info Col-0 DEX WL seedlings Original data
58 C58 3hpi -0.65 >More info -0.26 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
59 wnk8-3 untreated -0.60 >More info -0.31 >More info Col-0 untreated seedlings Original data GEO bulk
60 mutant acs9B (single mutant) -0.53 >More info -0.36 >More info col control (single mutant) Original data GEO bulk
61 piffq FR 1h 0.54 >More info 0.34 >More info WT FR 1h whole seedling Original data GEO bulk
62 Red/FR Light45min 0.07 >More info 0.81 >More info FarRed Light 45min Original data Light treatments
63 csn5 (csn5a-2 csn5b) light 0.52 >More info 0.36 >More info WT light Original data GEO bulk
64 bri1-116 0.15 >More info 0.73 >More info Col seedling Original data GEO bulk
65 Col-0 WT HL 3h 0.55 >More info 0.32 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
66 csn3-1 light 0.56 >More info 0.30 >More info WT light Original data GEO bulk
67 WT hypoxia -0.55 >More info -0.31 >More info WT normoxia whole rosette Original data
68 pXVE:HA-EDM2-a untreated -0.56 >More info -0.30 >More info Col-0 untreated seedlings Original data GEO bulk
69 seed germinating in countinuous light 24h SL 0.19 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
70 phyABCDE 4-day dark- 2 hours Rc50 0.52 >More info 0.32 >More info phyABCDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
71 2d red light grown pif1pif3pif4pif5 (pifq) mutant 0.51 >More info 0.33 >More info 2d red light grown WT(Col-0) seedlings Original data GEO bulk
72 tt4 -0.51 >More info -0.33 >More info Col-0 aerial part Original data
73 MIL4 ox -0.50 >More info -0.33 >More info Col Original data GEO bulk
74 35SpBVR3 -0.55 >More info -0.27 >More info WT Original data GEO bulk
75 ga1-3 SCL3OE 0.54 >More info 0.28 >More info ga1-3 whole root Original data
76 QC pSCR 3h BL 0.25 >More info 0.55 >More info QC pSCR 0h BL brassinosteroid root Original data
77 NaCl Col 0.20 >More info 0.60 >More info Col Original data GEO bulk
78 nas4x roots + Fe -0.52 >More info -0.27 >More info WT roots + Fe Roots Original data GEO bulk
79 essp3/brm5 mutant 0.53 >More info 0.26 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
80 pif4pif5 mut 24h FR 0.51 >More info 0.28 >More info WT 24h FR Original data GEO bulk
81 ABA 1 h 0.12 >More info 0.67 >More info Mock 1 h Original data Basic hormone treatment of seedlings
82 toc1-1-85hr 0.25 >More info 0.54 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
83 2d dark-grown pif1pif3pif4pif5 (pifq) mutant 0.60 >More info 0.18 >More info 2d dark-grown WT seedling Original data GEO bulk
84 dor drought 0.15 >More info 0.62 >More info WT drought Original data GEO bulk
85 35S:GIF -0.57 >More info -0.19 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
86 sfr3 warm 0.08 >More info 0.68 >More info WT-warm aerial tissues Original data GEO bulk
87 cop1 Seedling BL 0.50 >More info 0.25 >More info WT Seedling BL Original data GEO bulk
88 Shoot apex inflorescence (after bolting) 0.09 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
89 tbf1-SA -0.52 >More info -0.21 >More info WT-SA 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
90 WT 90-105 min Xanthomonas 0.51 >More info 0.22 >More info WT T0 Original data GEO bulk
91 WT NAA 2h -0.22 >More info -0.51 >More info WT 0h Leaf tissue Original data GEO bulk
92 ABA 3 h 0.20 >More info 0.52 >More info Mock 3 h Original data Basic hormone treatment of seedlings
93 erf104-ko H2O 4h 0.56 >More info 0.15 >More info Col-0 H2O 4h Original data GEO bulk
94 toc1-1-89hr 0.18 >More info 0.53 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
95 npr1 sni1 ssn2 0.51 >More info 0.18 >More info npr1 sni1 water water seedling Original data GEO bulk
96 Col-0 INA 6d -0.50 >More info -0.16 >More info Col-0 MOCK 6d Original data GEO bulk
97 CCA14 dark late -0.59 >More info -0.07 >More info Col dark late Original data GEO bulk
98 FAMA induced 4h 0.09 >More info 0.57 >More info control 4h Whole seedling Original data GEO bulk
99 35S::ERF104 H2O 4h 0.55 >More info 0.10 >More info Col-0 H2O 4h Original data GEO bulk
100 6h volatiles Sp. HRO-C48 -0.50 >More info -0.14 >More info 6h untreated whole seedling Original data GEO bulk
101 A. halleri -0.52 >More info -0.12 >More info A. thaliana mature leaves before flowering Original data GEO bulk
102 short 17-degree- 0.12 >More info 0.52 >More info control short Original data GEO bulk
103 Col0-PsmES4326-24hpi 0.03 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
104 Whole root - low pH 48H -0.08 >More info -0.52 >More info Whole root - Std pH 48H pH 4.6 for 48 hr Original data GEO bulk
105 CCA1-ox 6am non-polysomal 0.09 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
106 etiolated cop1 0.54 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
107 nrpe1 -0.52 >More info -0.05 >More info WT Original data
108 20m.KCl -0.51 >More info -0.04 >More info To. KCl 14 day old Roots Original data GEO bulk
109 Col-0 RNAi-MBS2/mbs1-1 HL 3h 0.55 >More info -0.01 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
110 WT zebularine 5d 0.50 >More info 0.04 >More info WT mock 5d shoot apical meristem Original data
111 Col BTH -0.14 >More info 0.67 >More info Col rosettes Original data GEO bulk
112 IAA7mII over-expressor IAA Treated -0.17 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
113 light 0.69 >More info -0.18 >More info dark light seedling Original data GEO bulk
114 seedling 3h after HZE WT -0.52 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
115 Laer pretreat GA Flg22 1h -0.21 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
116 siliques AtHb1 control -0.03 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
117 ein2 mutant roots mock -0.57 >More info 0.13 >More info roots mock Original data GEO bulk
118 Col-0 35S:MBS1 HL 3h 0.51 >More info -0.08 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
119 vtc1-1 -0.08 >More info 0.50 >More info Col-0 whole plant Original data GEO bulk
120 Pst-DC3000(hrpA)-4hpi -0.16 >More info 0.56 >More info Pst-DC3000-4hpi Original data GEO bulk
121 Heat shock optimum -0.28 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
122 Leafminer damaged seedlings -0.31 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
123 MPK6 ox Shoot Hypoxia 0.50 >More info -0.27 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk