4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on FHY3p dark+DEX
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List of experiments correlated with "FHY3p dark+DEX"  Help Download transcriptome of top 30
Score Experiment Correlation from
FHY3p dark+DEX		 Correlation to
FHY3p dark+DEX		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 FHY3p dark+DEX 1.00 >More info 1.00 >More info FHY3p dark+mock Original data GEO bulk
2 FHY3p far-red+DEX 0.68 >More info 0.66 >More info FHY3p far-red+mock Original data GEO bulk
3 2 hr Hypoxia Total RNA -0.62 >More info -0.71 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
4 root - 01% oxygen - 2h -0.45 >More info -0.75 >More info root - 21% oxygen - 2h Original data GEO bulk
5 Col-0 2HS -0.49 >More info -0.71 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
6 Col-0 low oxygen -0.53 >More info -0.66 >More info Col-0 control low oxygen root Original data GEO bulk
7 AgNO3 3 h -0.47 >More info -0.71 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
8 root hypoxia total -0.48 >More info -0.70 >More info root control total Original data GEO bulk
9 2 hr Hypoxia IP RNA -0.54 >More info -0.62 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
10 TNT-seedlings -0.33 >More info -0.83 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
11 9 hr Hypoxia IP RNA -0.53 >More info -0.62 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
12 WT Root Hypoxia -0.40 >More info -0.74 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
13 ABA control -0.39 >More info -0.75 >More info No ABA control Original data GEO bulk
14 9 hr Hypoxia Total RNA -0.54 >More info -0.59 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
15 Anoxia -0.48 >More info -0.63 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
16 WT seedlings MV -0.49 >More info -0.62 >More info WT seedlings control Seedlings Original data GEO bulk
17 phyABCDE Dark -0.52 >More info -0.58 >More info WT Dark Dark whole seedling Original data GEO bulk
18 WT Shoot Hypoxia -0.36 >More info -0.74 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
19 roottip hypoxia total -0.33 >More info -0.75 >More info roottip control total Original data GEO bulk
20 Col-0 wt Hypoxic -0.38 >More info -0.70 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
21 1h +Pi 0.40 >More info 0.67 >More info 1h -Pi root Original data GEO bulk
22 WT+H2O2 -0.42 >More info -0.65 >More info WT H2O2 Original data GEO bulk
23 5-Triiodobenzoic acid3 h -0.39 >More info -0.67 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
24 inhibitor B Treated -0.44 >More info -0.62 >More info Negative Control Original data GEO bulk
25 Light -0.41 >More info -0.62 >More info Control Original data GEO bulk
26 6h +Pi 0.60 >More info 0.42 >More info 6h -Pi root Original data GEO bulk
27 Selenate (root) -0.47 >More info -0.55 >More info Ws (root) Original data GEO bulk
28 phyABDE Dark -0.46 >More info -0.56 >More info WT Dark Dark whole seedling Original data GEO bulk
29 0.125 mM gold 24 h -0.49 >More info -0.53 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
30 Root Selenate -0.47 >More info -0.55 >More info Root control 40 micromolar selenate Root Original data GEO bulk
31 root Dosed gold -0.49 >More info -0.53 >More info root No gold .125 mM gold 24 h roots Original data
32 Col-Luc WT 3h antimycin A -0.50 >More info -0.51 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
33 flu over-tAPX -0.44 >More info -0.57 >More info WT Col Original data GEO bulk
34 ACN1-2 Sucrose 0.38 >More info 0.63 >More info Col-7 Sucrose Original data GEO bulk
35 Shoot apex inflorescence (after bolting) 0.35 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
36 root - 04% oxygen - 2h -0.21 >More info -0.79 >More info root - 21% oxygen - 2h Original data GEO bulk
37 pif3 Dark 0h 0.49 >More info 0.51 >More info WT Dark 0h etiolated seedling Original data GEO bulk
38 P.p 10.5hai -0.50 >More info -0.49 >More info At-Control roots Original data GEO bulk
39 flu -0.42 >More info -0.57 >More info WT Col Original data GEO bulk
40 1 h Light IP RNA 0.49 >More info 0.50 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
41 P.p 2.5hai -0.48 >More info -0.50 >More info At-Control roots Original data GEO bulk
42 chito-octamer -0.47 >More info -0.51 >More info Col Mock Original data GEO bulk
43 gul2-1 mutant -0.45 >More info -0.53 >More info WT 7 day-old whole seedlings Original data
44 P.p 6hai -0.50 >More info -0.47 >More info At-Control roots Original data GEO bulk
45 bbx24 in Simulated Shade 0.51 >More info 0.45 >More info WT in simulated shade shade seedling Original data
46 Fenclorim 4hr -0.54 >More info -0.42 >More info Acetone 4hr root Original data GEO bulk
47 Cycloheximide 3 h -0.42 >More info -0.54 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
48 shoot hypoxia total -0.29 >More info -0.67 >More info shoot control total Original data GEO bulk
49 oligomycin 1 h -0.38 >More info -0.58 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
50 Col ozone 3h -0.28 >More info -0.67 >More info Col clean-air 3h ozone Original data GEO bulk
51 rosette Light Wounded -0.43 >More info -0.51 >More info rosette Light Control Original data GEO bulk
52 piffq 2d WL -0.33 >More info -0.61 >More info WT 2d WL whole seedling Original data GEO bulk
53 rosette Dark Wounded -0.39 >More info -0.54 >More info rosette Dark Control Original data GEO bulk
54 Mutant iaa17-6 (IAA) -0.24 >More info -0.69 >More info Col (IAA) Original data GEO bulk
55 Phytoprostane A1 4 h -0.38 >More info -0.54 >More info Col-0 Original data GEO bulk
56 9 hr Hypoxia 1 hr recovery Total RNA -0.35 >More info -0.57 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
57 seedlings protease IV -0.42 >More info -0.50 >More info seedlings nontreated control whole seedling Original data
58 clf-28 swn-7 -0.40 >More info -0.51 >More info Col whole plant Original data GEO bulk
59 inhibitor A Treated -0.34 >More info -0.57 >More info Negative Control Original data GEO bulk
60 WT+chitooctaose -0.34 >More info -0.57 >More info WT+water chitooctaose seedlings Original data GEO bulk
61 Col-0 low oxygen -0.35 >More info -0.55 >More info Col-0 Original data GEO bulk
62 bri1-116 0.17 >More info 0.73 >More info Col seedling Original data GEO bulk
63 pepr1-1 Pepr2-3 +Pep2 2h 0.38 >More info 0.52 >More info WT +Pep2 2h Pep2 Original data GEO bulk
64 Seedling KUA1-IOX est -0.31 >More info -0.59 >More info Seedling KUA1-IOX mock Original data
65 Methyl Jasmonate 0.5 h -0.39 >More info -0.50 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
66 IAA/inhibitor B Treated -0.28 >More info -0.61 >More info IAA Treated Original data GEO bulk
67 albino Ds13-2198-1 0.26 >More info 0.62 >More info control Original data GEO bulk
68 root - 01% oxygen - 30min -0.29 >More info -0.59 >More info root - 21% oxygen - 30min Original data GEO bulk
69 vtc2 mature somatic embryo -0.50 >More info -0.37 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
70 WT 3H Cold -0.27 >More info -0.60 >More info WT control Original data GEO bulk
71 root - 04% oxygen - 30min -0.20 >More info -0.66 >More info root - 21% oxygen - 30min Original data GEO bulk
72 9 hr Hypoxia 1 hr recovery IP RNA -0.30 >More info -0.56 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
73 ahg1-1 -0.29 >More info -0.57 >More info ABA control Original data GEO bulk
74 15m.KCl -0.33 >More info -0.52 >More info To. KCl 14 day old Roots Original data GEO bulk
75 chito-tetramer -0.33 >More info -0.52 >More info Col Mock Original data GEO bulk
76 pab polysome -0.24 >More info -0.61 >More info WT polysome seedling shoot/aerial seedling Original data
77 csn5 (csn5a-2 csn5b) light -0.57 >More info -0.27 >More info WT light Original data GEO bulk
78 Te ozone -0.51 >More info -0.32 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
79 TiO2 germinant 0.52 >More info 0.30 >More info Millipore Water germinant TiO2 seedling Original data
80 toc1-1-53hr -0.32 >More info -0.50 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
81 Whole root - low pH 3H -0.26 >More info -0.56 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
82 WT seedlings IAA -0.22 >More info -0.59 >More info WT seedlings control Seedlings Original data GEO bulk
83 plant (tga2-5-6) 4h phytoprostane A1 -0.24 >More info -0.56 >More info plant (tga2-5-6) 4h control Original data GEO bulk
84 hai1-2 low water potential -0.30 >More info -0.50 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
85 root - 08% oxygen - 2h -0.11 >More info -0.68 >More info root - 21% oxygen - 2h Original data GEO bulk
86 rosettes WT drought -0.28 >More info -0.51 >More info rosettes WT watered Original data GEO bulk
87 nia1nia2noa1-2 -0.53 >More info -0.25 >More info Col-0 whole seedlings Original data GEO bulk
88 Col in Pi deficiency medium -0.24 >More info -0.54 >More info Col in control medium root Original data GEO bulk
89 9m.KCl -0.22 >More info -0.55 >More info To. KCl 14 day old Roots Original data GEO bulk
90 Kas-1 -Fe 24h 0.19 >More info 0.58 >More info Kas-1 +Fe 24h roots Original data GEO bulk
91 Kas -Fe 24h Roots 0.19 >More info 0.58 >More info Kas +Fe 24h Roots Original data GEO bulk
92 3x(m) -0.16 >More info -0.61 >More info 2x two week old seedlings Original data
93 WT Bc inoculation 14h -0.52 >More info -0.23 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
94 root - 04% oxygen - 48h -0.16 >More info -0.59 >More info root - 21% oxygen - 48h Original data GEO bulk
95 root - 01% oxygen - 48h -0.15 >More info -0.60 >More info root - 21% oxygen - 48h Original data GEO bulk
96 SA 4mM -0.22 >More info -0.53 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
97 Rose Bengal 0.5 uM -0.18 >More info -0.57 >More info Control RB and PER Rose Bengal Original data
98 sfr6 drought 0.17 >More info 0.57 >More info WT drought All aerial tissue Original data GEO bulk
99 seed germinating in countinuous light 24h SL 0.06 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
100 Mutant siz1-3 (Drought) -0.53 >More info -0.19 >More info Col-0 (Drought) Original data GEO bulk
101 siz1-3 drought -0.53 >More info -0.19 >More info Col-0 drought Original data GEO bulk
102 35S:RPS4 eds1-2 2h 0.14 >More info 0.58 >More info 35S:RPS4 2h leaves Original data
103 Estradiol4 days -0.19 >More info -0.52 >More info Col Original data GEO bulk
104 estradiol induced LEC1 -0.19 >More info -0.52 >More info control Original data GEO bulk
105 Protoplast Induced -0.17 >More info -0.52 >More info Uninduced Original data GEO bulk
106 cpctry -0.17 >More info -0.52 >More info Col Original data GEO bulk
107 Chemically -0.13 >More info -0.56 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
108 pXVE:HA-EDM2-a untreated 0.12 >More info 0.57 >More info Col-0 untreated seedlings Original data GEO bulk
109 gun4-1 -0.53 >More info -0.13 >More info WT Col-0 seedling Original data GEO bulk
110 Aerobic e1 ate2 -0.14 >More info -0.52 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
111 Tsu-1 -Fe 24h -0.15 >More info -0.50 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
112 ABI3GR +DEX +CHX -0.15 >More info -0.50 >More info ABI3GR -DEX +CHX DEX CHX root/protoplasts Original data GEO bulk
113 Tsu -Fe 24h Roots -0.15 >More info -0.50 >More info Tsu +Fe 24h Roots Original data GEO bulk
114 35S::PI ap3-3 35S::AP-GR +DEX -0.13 >More info -0.50 >More info 0hr DEX Original data GEO bulk
115 WT-Dry -0.06 >More info -0.56 >More info WT-CK dehydration treatment 1h Original data
116 Leaf wounded -0.09 >More info -0.52 >More info Leaf control vegetative leaf Original data GEO bulk
117 root - 08% oxygen - 30min 0.02 >More info -0.61 >More info root - 21% oxygen - 30min Original data GEO bulk
118 ex2 flu dark 8hours/30 minute light -0.05 >More info -0.53 >More info col dark 8hours/30 minute light Original data GEO bulk
119 Cor hrpS 24h -0.07 >More info -0.50 >More info Mock 24h Cor hrpS Original data GEO bulk
120 4C 2h(SOIL) -0.01 >More info -0.55 >More info 4C 0h(SOIL) Original data GEO bulk
121 opr3 OPDA 0.5 h -0.00 >More info -0.55 >More info opr3 0 h Original data GEO bulk
122 SHR-GR Time 3H Dex -0.02 >More info -0.52 >More info SHR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
123 Col BTH -0.15 >More info 0.67 >More info Col rosettes Original data GEO bulk
124 IAA7mII over-expressor IAA Treated -0.17 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
125 Whole root - low pH 1H 0.04 >More info -0.53 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
126 Red/FR Light45min 0.03 >More info -0.52 >More info FarRed Light 45min Original data Light treatments
127 Laer pretreat GA Flg22 1h -0.22 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
128 CCA1-ox 6am non-polysomal -0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
129 Heat shock optimum -0.18 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
130 siliques AtHb1 control -0.25 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
131 Col0-PsmES4326-24hpi -0.38 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
132 Leafminer damaged seedlings -0.39 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk