4.0:Analysis result - correlation network
Home
Method
Manual
History
Module-based correlation network(MCN) centered on gun1-1 +lincomycin
> How to read results
Simple
All
>>Show Interactive view (test)
List of experiments correlated with "gun1-1 +lincomycin"
Download transcriptome of top 30
Score
Experiment
Correlation from
gun1-1 +lincomycin
Correlation to
gun1-1 +lincomycin
Control Experiment
Genotype
Treatment
Tissue
Link to
original data
Experimental
Category
Data set
Details
1
gun1-1 +lincomycin
1.00
>More info
1.00
>More info
Col-0 +lincomycin
Original data
GEO bulk
2
gun1gun5 Norflurazon
0.70
>More info
0.78
>More info
Norflurazon
a herbicide (Norflurazon)
seedling
Original data
GEO bulk
3
Col-0 +lincomycin
-0.61
>More info
-0.69
>More info
Col-0 -lincomycin
Original data
GEO bulk
4
col-5 hrpA 12h
-0.65
>More info
-0.62
>More info
col-5 MgCl2 12h
Whole leaf
Original data
GEO bulk
5
4h light (+Lincomycin)
-0.68
>More info
-0.56
>More info
4h light (-Lincomycin)
seedlings
Original data
GEO bulk
6
Seedling KUA1-IOX est
-0.53
>More info
-0.71
>More info
Seedling KUA1-IOX mock
Original data
7
CabpBVR2
-0.60
>More info
-0.59
>More info
WT
Original data
GEO bulk
8
bri1-116
0.46
>More info
0.73
>More info
Col
seedling
Original data
GEO bulk
9
35SpBVR3
-0.63
>More info
-0.53
>More info
WT
Original data
GEO bulk
10
Dark 4 h pls RedLight 1min
0.54
>More info
0.61
>More info
Dark 4 h
Original data
Light treatments
11
Light 4h steady-state
0.65
>More info
0.50
>More info
Dark steady-state
white light
seedlings (aerial parts)
Original data
GEO bulk
12
Light 4h polysome-bound
0.65
>More info
0.50
>More info
Dark polysome-bound
white light
seedlings (aerial parts)
Original data
GEO bulk
13
efr-1 +elf18 10h
0.55
>More info
0.56
>More info
WT +elf18 10h
elf18
Original data
GEO bulk
14
1h light (+Lincomycin)
-0.58
>More info
-0.53
>More info
1h light (-Lincomycin)
seedlings
Original data
GEO bulk
15
Shoot submergence 24h
-0.61
>More info
-0.50
>More info
Shoot light control
24 h submergence in darkness
whole shoot
Original data
GEO bulk
16
AgNO3 3 h
-0.42
>More info
-0.69
>More info
Mock 3 h
Original data
Effect of ethylene inhibitors on seedlings
17
WT Red light 18h
0.56
>More info
0.54
>More info
WT Dark 18h
deetiolated seedling
Original data
GEO bulk
18
24h light (+Lincomycin)
-0.58
>More info
-0.52
>More info
24h light (-Lincomycin)
seedlings
Original data
GEO bulk
19
aerial organ callus inducing medium 96 h
-0.59
>More info
-0.51
>More info
aerial organ callus inducing medium 0 h
96 hours after incubating on callus inducing medium
aerial organ explants
Original data
GEO bulk
20
WT light
0.54
>More info
0.55
>More info
WT dark
Original data
GEO bulk
21
E.coli 0157 H7 7h
-0.51
>More info
-0.58
>More info
Mock 7h
E.coli 0157 H7
Original data
GEO bulk
22
etiolated cop1BBX22-GFPox
0.58
>More info
0.50
>More info
etiolated Col-0
whole seedlings
Original data
GEO bulk
23
Shoot dark control 7h
-0.60
>More info
-0.48
>More info
Shoot light control
7 h non-submerged dark condition
whole shoot
Original data
GEO bulk
24
Shoot dark control 24h
-0.56
>More info
-0.52
>More info
Shoot light control
24 h non-submerged dark condition
whole shoot
Original data
GEO bulk
25
CHLM overexpression
0.63
>More info
0.45
>More info
Col-0 estr
green tissue
Original data
GEO bulk
26
col-5 DC3000 12h
-0.64
>More info
-0.43
>More info
col-5 MgCl2 12h
Whole leaf
Original data
GEO bulk
27
seedlings protease IV
-0.58
>More info
-0.48
>More info
seedlings nontreated control
whole seedling
Original data
28
WT Seedling BL
0.53
>More info
0.53
>More info
WT Seedling Dark
Original data
GEO bulk
29
aerial organ callus inducing medium 48 h
-0.62
>More info
-0.43
>More info
aerial organ callus inducing medium 0 h
48 hours after incubating on callus inducing medium
aerial organ explants
Original data
GEO bulk
30
Dark 4 h pls UV-A 5 min
0.59
>More info
0.45
>More info
Dark 4 h
Original data
Light treatments
31
Col-0 DCA 6d
-0.48
>More info
-0.55
>More info
Col-0 MOCK 6d
Original data
GEO bulk
32
hrpA fliC 7h
-0.49
>More info
-0.54
>More info
Mock 7h
hrpA fliC
Original data
GEO bulk
33
csn5 (csn5a-2 csn5b) dark
0.57
>More info
0.45
>More info
WT dark
Original data
GEO bulk
34
seedling 1.5h after HZE atm-1
-0.57
>More info
-0.45
>More info
seedling day 1 unirradiated atm-1
1.5h
Original data
35
csn4-1 mutant
0.54
>More info
0.48
>More info
WT dark
Original data
GEO bulk
36
csn3-1 dark
0.54
>More info
0.48
>More info
WT dark
Original data
GEO bulk
37
TNT-seedlings
-0.38
>More info
-0.64
>More info
DMF-control-seedlings
TNT-treated-seedlings
whole plant
Original data
GEO bulk
38
gpa1 -ABA GC
0.38
>More info
0.64
>More info
Col-0 -ABA GC
Guard cells taken for mature leaves of five week-old plants
Original data
GEO bulk
39
E.coli TUV86 2 fliC 7h
-0.49
>More info
-0.53
>More info
Mock 7h
E.coli TUV86 2 fliC
Original data
GEO bulk
40
Dark 6h ivd
-0.59
>More info
-0.41
>More info
0h ivd
Original data
41
edr1 36 h powdery mildew
-0.57
>More info
-0.43
>More info
Col-0 36 h powdery mildew
Original data
GEO bulk
42
35S::ERF104 Flg22 4h
-0.49
>More info
-0.51
>More info
35S::ERF104 H2O 4h
Original data
GEO bulk
43
hrcC
-0.56
>More info
-0.43
>More info
MgCl2
5x10^7 cfu/ml DC3000 hrcC mutant
Original data
GEO bulk
44
ataf1-1 mutant Col-0 Bgh inoculated
-0.52
>More info
-0.47
>More info
ataf1-1 mutant Col-0 Un-inoculated
Original data
GEO bulk
45
Red Light 4 h
-0.39
>More info
-0.60
>More info
White Light 4 h
Original data
Light treatments
46
col-5 hrpA 4h
-0.44
>More info
-0.55
>More info
col-5 MgCl2 4h
Whole leaf
Original data
GEO bulk
47
Col-0 9 hpi A. brassicicola
-0.43
>More info
-0.56
>More info
Col-0 9 hpi mock
3rd-5th true leaves
Original data
48
aerial organ callus inducing medium 12 h
-0.50
>More info
-0.48
>More info
aerial organ callus inducing medium 0 h
12 hours after incubating on callus inducing medium
aerial organ explants
Original data
GEO bulk
49
9m.KNO3
-0.54
>More info
-0.44
>More info
To.
KNO3
14 day old Roots
Original data
GEO bulk
50
mpk6-ko Flg22 4h
-0.63
>More info
-0.35
>More info
mpk6-ko H2O 4h
Original data
GEO bulk
51
0h light (+Lincomycin)
-0.45
>More info
-0.53
>More info
0h light (-Lincomycin)
seedlings
Original data
GEO bulk
52
petiole in D
-0.54
>More info
-0.43
>More info
petiole in WL
petioles
Original data
GEO bulk
53
GST NPP1 4 h (leaf)
-0.47
>More info
-0.50
>More info
Mock 4 h (leaf)
Original data
Elicitor treatments
54
WT +elf18 10h
-0.56
>More info
-0.40
>More info
WT untreated
elf18
Original data
GEO bulk
55
rGRF
-0.39
>More info
-0.56
>More info
Col-0
Apices from 20 day-old plants growth in shortdays
Original data
56
gpa1-4/agb1-2 ozone 2d
0.42
>More info
0.53
>More info
Col ozone 2d
ozone
Original data
GEO bulk
57
Dark 4 h pls UV-AB 5min
0.59
>More info
0.35
>More info
Dark 4 h
Original data
Light treatments
58
cpr5scv1
-0.43
>More info
-0.51
>More info
WT(COL)
Original data
GEO bulk
59
ABA control
-0.35
>More info
-0.59
>More info
No ABA control
Original data
GEO bulk
60
1 h Light IP RNA
0.51
>More info
0.42
>More info
1h Dark IP RNA
1 h light control
whole seedlings
Original data
GEO bulk
61
Col-0 DEX Shade
-0.62
>More info
-0.31
>More info
Col-0 DEX WL
seedlings
Original data
62
abi4-102 +lincomycin
0.50
>More info
0.43
>More info
Col-0 +lincomycin
Original data
GEO bulk
63
shoot hypoxia pRBCS
0.42
>More info
0.51
>More info
shoot hypoxia total
Original data
GEO bulk
64
Col ozone 3h
-0.34
>More info
-0.59
>More info
Col clean-air 3h
ozone
Original data
GEO bulk
65
tor mutant glucose
-0.55
>More info
-0.37
>More info
WT (Col) glucose
glucose
seedlings
Original data
GEO bulk
66
WT +elf18 2h
-0.51
>More info
-0.41
>More info
WT untreated
elf18
Original data
GEO bulk
67
Col-0 norflurazon
-0.50
>More info
-0.42
>More info
Col-0 control
Original data
GEO bulk
68
hrpA 7h
-0.51
>More info
-0.41
>More info
Mock 7h
hrpA
Original data
GEO bulk
69
WT(Ler) Rc50
0.60
>More info
0.32
>More info
WT(Ler) Dark
Original data
GEO bulk
70
ein2-1 9 hpi A. brassicicola
-0.41
>More info
-0.50
>More info
Col-0 9 hpi mock
3rd-5th true leaves
Original data
71
mutant acs2C (single mutant)
-0.53
>More info
-0.37
>More info
col control (single mutant)
Original data
GEO bulk
72
Col-0 low oxygen
-0.50
>More info
-0.40
>More info
Col-0
Original data
GEO bulk
73
gpa1-4/agb1-2 ozone 3h
0.40
>More info
0.50
>More info
Col ozone 3h
ozone
Original data
GEO bulk
74
rGRF3x35S:GIF
-0.36
>More info
-0.53
>More info
Col-0
Apices from 20 day-old plants growth in shortdays
Original data
75
cpr5npr1svi1
-0.36
>More info
-0.52
>More info
WT(COL)
Original data
GEO bulk
76
WT Rc50
0.59
>More info
0.29
>More info
WT Dark
red light
whole seedling
Original data
GEO bulk
77
mutant acs9B (single mutant)
-0.53
>More info
-0.34
>More info
col control (single mutant)
Original data
GEO bulk
78
Leafminer locally damaged thaliana seedlings
-0.63
>More info
-0.24
>More info
Undamaged thaliana seedlings
locally damaged by leafminer
leaves
Original data
GEO bulk
79
ulp1c ulp1d +Pto
-0.59
>More info
-0.28
>More info
ulp1c ulp1d mock
Original data
GEO bulk
80
AvrRpm1 2 h (leaf)
-0.28
>More info
-0.59
>More info
Mock 2 h (leaf)
Original data
Pseudomonas syringae pv. tomato or pv. phaseolicola
infection
81
phyABDE Rc50
0.53
>More info
0.33
>More info
phyABDE Dark
red light
whole seedling
Original data
GEO bulk
82
anac017-2 water 3h
0.52
>More info
0.33
>More info
WT water 3h
3h_water
Original data
GEO bulk
83
essp3/brm5 mutant
0.51
>More info
0.34
>More info
WT (Pro-beta-CG;GUS)
Original data
GEO bulk
84
coi1-16 ein2 sid2 ctrl
0.51
>More info
0.34
>More info
Col-0 ozone- (control genotype coi1-16 ein2 sid2)
control
Original data
85
DC3000 7h
-0.57
>More info
-0.28
>More info
Mock 7h
DC3000
Original data
GEO bulk
86
petiole in FRD
-0.57
>More info
-0.28
>More info
petiole in WL
petioles
Original data
GEO bulk
87
cpr5npr1
-0.35
>More info
-0.50
>More info
WT(COL)
Original data
GEO bulk
88
phr1 phl1 Root-Pi
-0.55
>More info
-0.29
>More info
WT Shoot+Pi
roots
Original data
GEO bulk
89
GST 4 h (leaf)
-0.22
>More info
-0.62
>More info
Mock 4 h (leaf)
Original data
Elicitor treatments
90
phr1 Shoot-Pi
0.52
>More info
0.31
>More info
WT Root-Pi
shoots
Original data
GEO bulk
91
Mutant coi1(leaf)
0.50
>More info
0.33
>More info
Col-0 (leaf)
Original data
GEO bulk
92
tumour
-0.55
>More info
-0.28
>More info
non-tumor
tumour
Original data
GEO bulk
93
Dark 2day wt
-0.56
>More info
-0.27
>More info
0h wt
Original data
94
DC3000 hrcC 2 h (leaf)
-0.26
>More info
-0.57
>More info
Mock 2 h (leaf)
Original data
Pseudomonas syringae pv. tomato or pv. phaseolicola
infection
95
C58 35dpi
-0.56
>More info
-0.26
>More info
Reference 35dpi
wounded inflorescence stalk segments
Original data
GEO bulk
96
root longitudinal zone-3 pH 4.6
-0.30
>More info
-0.52
>More info
root longitudinal zone-3 pH 5.7
Original data
GEO bulk
97
Col-0 V. longisporum-inoculated 48 hpi
-0.27
>More info
-0.55
>More info
Col-0 mock 48 hpi
Pool of >50 individual roots
Original data
98
seed germinating in countinuous light 24h SL
0.14
>More info
0.67
>More info
Control for tissue data
seed
Original data
GEO bulk
99
pif4pif5 mut 24h FR
0.56
>More info
0.24
>More info
WT 24h FR
Original data
GEO bulk
100
WT(Ler) Rc15
0.56
>More info
0.23
>More info
WT(Ler) Dark
Original data
GEO bulk
101
Col-Luc WT 3h antimycin A
-0.54
>More info
-0.25
>More info
Col-Luc WT mock
50 µM antimycin A for 3 hours
whole green tissue
Original data
GEO bulk
102
abh1 -ABA
-0.29
>More info
-0.50
>More info
Col-0 -ABA
Original data
GEO bulk
103
3x(m)
-0.13
>More info
-0.65
>More info
2x
two week old seedlings
Original data
104
pad4-PsmES4326-24hpi
0.50
>More info
0.27
>More info
Col0-PsmES4326-24hpi
PsmES4326
leaf
Original data
GEO bulk
105
Dark 3day wt
-0.50
>More info
-0.27
>More info
0h wt
Original data
106
erf104-ko Flg22 4h
-0.50
>More info
-0.27
>More info
erf104-ko H2O 4h
Original data
GEO bulk
107
C24-3h IAA
-0.57
>More info
-0.20
>More info
C24-0h IAA
whole plant
Original data
GEO bulk
108
Cor 10h
-0.51
>More info
-0.26
>More info
Mock 10h
Cor
Original data
GEO bulk
109
IRP1-OE-Fe--shoot
-0.25
>More info
-0.52
>More info
COL-0-Fe--shoot
shoot
Original data
110
fls1-3
-0.59
>More info
-0.17
>More info
Col-0
Rosette leaves
Original data
111
WT 3h -P
-0.17
>More info
-0.58
>More info
WT 3h +P
No phosphate medium
seedlings without roots
Original data
GEO bulk
112
treated group
-0.53
>More info
-0.21
>More info
Control group
Original data
113
mp-B4149 mutant IAA
0.50
>More info
0.24
>More info
GR-bdl IAA
Original data
GEO bulk
114
Chemically
-0.13
>More info
-0.61
>More info
Solvent
treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid
whole seedlings
Original data
115
4d red light grown hmr-5 seedlings
-0.51
>More info
-0.22
>More info
4d red light grown WT(Col-0) seedlings
Original data
116
Dark 2day hml
-0.52
>More info
-0.19
>More info
0h hml
Original data
117
Shoot apex inflorescence (after bolting)
0.05
>More info
0.65
>More info
Control for tissue data
Original data
Developmental series; organs / tissues at different ages
118
seedling SPL13
-0.17
>More info
-0.52
>More info
seedling Col-0
Original data
GEO bulk
119
Mature callus
-0.51
>More info
-0.18
>More info
Young callus
hypocotyls
Original data
GEO bulk
120
ANAC102 over-expressor
0.53
>More info
0.14
>More info
C24
Original data
GEO bulk
121
Botrytis cinerea 48h
-0.50
>More info
-0.17
>More info
control 48h
Original data
GEO bulk
122
CeO2 germinant
-0.01
>More info
0.67
>More info
Millipore Water germinant
CeO2
seedling
Original data
123
piffq FR 3h
0.50
>More info
0.15
>More info
WT FR 3h
whole seedling
Original data
GEO bulk
124
opr3 OPDA 2 h
0.06
>More info
-0.71
>More info
opr3 0 h
Original data
GEO bulk
125
Blue Light 45 min
-0.13
>More info
-0.50
>More info
White Light 45min
Original data
Light treatments
126
Red/FR Light45min
-0.01
>More info
0.64
>More info
FarRed Light 45min
Original data
Light treatments
127
SCR-GR Time 3H Dex
-0.03
>More info
-0.56
>More info
SCR-GR Time 0H Dex
Dex media for 3 hours
Original data
GEO bulk
128
Shoot submergence 7h
-0.59
>More info
-0.00
>More info
Shoot light control
7 h submergence in darkness
whole shoot
Original data
GEO bulk
129
amiRAP aerobic
0.01
>More info
0.55
>More info
WT aerobic
aerobic
Original data
GEO bulk
130
seedling 3h after HZE WT
-0.57
>More info
0.02
>More info
seedling day 1 unirradiated WT
3h
Original data
131
CCA1-ox 6am non-polysomal
0.03
>More info
0.51
>More info
WT 6am non-polysomal
aerial part
Original data
132
IAA7mII over-expressor IAA Treated
-0.16
>More info
0.69
>More info
empty vector IAA Treated
Original data
GEO bulk
133
Col-0 24hpi A. brassicicola
-0.54
>More info
0.02
>More info
Col-0 24hpi mock
3rd-5th true leaves
Original data
134
SHR-GR Time 3H Dex
-0.00
>More info
-0.51
>More info
SHR-GR Time 0H Dex
Dex media for 3 hours
Original data
GEO bulk
135
rao1-1
-0.50
>More info
0.03
>More info
Col-Luc WT mock
water control treatment 3 hours
whole green tissue
Original data
GEO bulk
136
WT zebularine 5d
0.50
>More info
-0.06
>More info
WT mock 5d
shoot apical meristem
Original data
137
light
0.61
>More info
-0.18
>More info
dark
light
seedling
Original data
GEO bulk
138
Col BTH
-0.27
>More info
0.67
>More info
Col
rosettes
Original data
GEO bulk
139
Heat shock optimum
-0.29
>More info
0.65
>More info
Heat shock baseline
Photosynthesis at optimum temperature
leaf first fully expanded
Original data
GEO bulk
140
siliques AtHb1 control
-0.22
>More info
0.52
>More info
siliques WT control
control
silique
Original data
GEO bulk
141
Laer pretreat GA Flg22 1h
-0.51
>More info
0.71
>More info
Laer pretreat water control
leaf discs
Original data
GEO bulk
142
Col0-PsmES4326-24hpi
-0.46
>More info
0.61
>More info
Col0-mock-24hpi
leaf
Original data
GEO bulk
143
Leafminer damaged seedlings
-0.63
>More info
0.56
>More info
Healthy seedlings
leaves
Original data
GEO bulk