4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on seedling 24h after HZE atm-1
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List of experiments correlated with "seedling 24h after HZE atm-1"  Help Download transcriptome of top 30
Score Experiment Correlation from
seedling 24h after HZE atm-1		 Correlation to
seedling 24h after HZE atm-1		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 seedling 24h after HZE atm-1 1.00 >More info 1.00 >More info seedling day 2 unirradiated atm-1 24h Original data
2 seedling 24h after HZE WT 0.81 >More info 0.85 >More info seedling day 2 unirradiated WT 24h Original data
3 seedling 3h after Gamma WT 0.64 >More info 0.81 >More info seedling day 1 unirradiated WT 3h Original data
4 atm3 -0.66 >More info -0.76 >More info Col0 whole plant Original data GEO bulk
5 seedling 6h after HZE WT 0.81 >More info 0.58 >More info seedling day 1 unirradiated WT 6h Original data
6 BLM+INA 0.71 >More info 0.56 >More info CK BLM and INA seedling Original data
7 TNT-seedlings 0.54 >More info 0.73 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
8 seedling 12h after HZE WT 0.68 >More info 0.58 >More info seedling day 1 unirradiated WT 12h Original data
9 BLM 0.72 >More info 0.51 >More info CK BLM seedling Original data
10 seedling 6h after Gamma WT 0.65 >More info 0.57 >More info seedling day 1 unirradiated WT 6h Original data
11 irradiated leaf (WT 1d) 0.55 >More info 0.65 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
12 seedling 1.5h after Gamma WT 0.53 >More info 0.63 >More info seedling day 1 unirradiated WT 1.5h Original data
13 oligomycin 1 h 0.53 >More info 0.63 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
14 Genotoxic Stress 3 h (shoot) 0.49 >More info 0.67 >More info Stress mock 3 h (shoot) Original data Stress treatments
15 pil5 red light 0.61 >More info 0.54 >More info Col-0 red light Original data GEO bulk
16 hira-root -0.62 >More info -0.50 >More info WT-root root Original data
17 FLIGHT TAGESB plate6 ROOTS 0.48 >More info 0.64 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
18 seedling -S Exp 0.45 >More info 0.64 >More info seedling FN Exp seedling Original data
19 seedling 1.5h after HZE WT 0.58 >More info 0.50 >More info seedling day 1 unirradiated WT 1.5h Original data
20 Kas -Fe 48h Shoots 0.63 >More info 0.43 >More info Kas +Fe 24h Shoots Original data GEO bulk
21 15m.KCl 0.49 >More info 0.54 >More info To. KCl 14 day old Roots Original data GEO bulk
22 GO5; 8h switch to ambient CO2 concentrations; 0.46 >More info 0.55 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
23 Col0-PsmES4326-24hpi 0.39 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
24 gis5 seedlings 0.51 >More info 0.48 >More info WT seedlings Whole seedlings (leaves + roots) Original data
25 WT seedlings MV 0.67 >More info 0.32 >More info WT seedlings control Seedlings Original data GEO bulk
26 csn3-1 light 0.71 >More info 0.28 >More info WT light Original data GEO bulk
27 Cycloheximide 3 h 0.54 >More info 0.45 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
28 WT leaves - Fe 0.61 >More info 0.38 >More info WT leaves + Fe Leaves Original data GEO bulk
29 csn5 (csn5a-2 csn5b) light 0.71 >More info 0.28 >More info WT light Original data GEO bulk
30 sfr6 drought -0.50 >More info -0.48 >More info WT drought All aerial tissue Original data GEO bulk
31 4C 2h(SOIL) 0.19 >More info 0.79 >More info 4C 0h(SOIL) Original data GEO bulk
32 oligomycin 4 h 0.56 >More info 0.41 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
33 flu dark 8hours/30 minute light 0.24 >More info 0.73 >More info col dark 8hours/30 minute light Original data GEO bulk
34 4C 1h 0.34 >More info 0.63 >More info 4C 0h Original data GEO bulk
35 WT drought 0.42 >More info 0.55 >More info WT control All aerial tissue Original data GEO bulk
36 Rose Bengal 0.5 uM 0.34 >More info 0.63 >More info Control RB and PER Rose Bengal Original data
37 Protoplast Induced 0.35 >More info 0.61 >More info Uninduced Original data GEO bulk
38 inhibitor B Treated 0.44 >More info 0.52 >More info Negative Control Original data GEO bulk
39 Leaf wounded 0.29 >More info 0.67 >More info Leaf control vegetative leaf Original data GEO bulk
40 nas4x leaves - Fe -0.60 >More info -0.35 >More info WT leaves - Fe Leaves Original data GEO bulk
41 max4 hypocotyl 0.44 >More info 0.50 >More info wt hypocotyl hypocotyl Original data GEO bulk
42 whole roots 140 mM NaCl 30 minutes 0.30 >More info 0.64 >More info whole roots standard Original data GEO bulk
43 npr1 sni1 brca2a SA -0.31 >More info -0.62 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
44 35S::MBF1c 0.33 >More info 0.60 >More info control Original data GEO bulk
45 whole roots -Fe 72 hour 0.58 >More info 0.34 >More info whole roots standard Original data GEO bulk
46 Fe starvation 72 h 0.58 >More info 0.34 >More info Control Original data GEO bulk
47 Laer pretreat GA Flg22 1h 0.21 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
48 seedling 6h after Gamma atm-1 0.69 >More info 0.22 >More info seedling day 1 unirradiated atm-1 6h Original data
49 CDB1-Knockout -0.18 >More info -0.73 >More info WT Original data GEO bulk
50 1h +Pi -0.35 >More info -0.55 >More info 1h -Pi root Original data GEO bulk
51 whole roots 140 mM NaCl 1 hour 0.34 >More info 0.55 >More info whole roots standard Original data GEO bulk
52 Bur-0-3h IAA 0.51 >More info 0.38 >More info Bur-0h IAA whole plant Original data GEO bulk
53 9m.KCl 0.39 >More info 0.50 >More info To. KCl 14 day old Roots Original data GEO bulk
54 aox1a:rpoTmp untreated 0.55 >More info 0.33 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
55 coi1-2 JA 0.32 >More info 0.56 >More info JA Whole seedling Original data GEO bulk
56 Col-0 37C 0.66 >More info 0.22 >More info Col-0 22C Original data GEO bulk
57 UV 0.59 >More info 0.28 >More info WT aerial region Original data GEO bulk
58 ex2 flu dark 8hours/30 minute light 0.21 >More info 0.66 >More info col dark 8hours/30 minute light Original data GEO bulk
59 coi1-2 0.35 >More info 0.52 >More info Col-0 mock Whole seedling Original data GEO bulk
60 WT 3H Cold 0.16 >More info 0.71 >More info WT control Original data GEO bulk
61 Whole root - low pH 30min 0.36 >More info 0.50 >More info Whole root - Std pH 30min pH 4.6 for 30 min Original data GEO bulk
62 apum23 0.66 >More info 0.19 >More info WT (Col-3) aerial parts Original data GEO bulk
63 WT+chitooctaose 0.31 >More info 0.54 >More info WT+water chitooctaose seedlings Original data GEO bulk
64 WT-Dry 0.29 >More info 0.56 >More info WT-CK dehydration treatment 1h Original data
65 low CO2 + light 0.28 >More info 0.57 >More info normal CO2 + light Original data GEO bulk
66 sicy-192 gun1-101 cotyledons 0.50 >More info 0.34 >More info WT cotyledons cotyledons Original data
67 Whole root - low pH 3H 0.31 >More info 0.53 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
68 seedlings +5AC 0.59 >More info 0.25 >More info control seedlings 10-day old whole seedling Original data GEO bulk
69 12m.KCl 0.30 >More info 0.53 >More info To. KCl 14 day old Roots Original data GEO bulk
70 Heat shock optimum 0.17 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
71 seedling 12h after HZE atm-1 0.71 >More info 0.11 >More info seedling day 1 unirradiated atm-1 12h Original data
72 JA 3h -0.24 >More info -0.57 >More info EtOH 3h 3hr Original data GEO bulk
73 msh1 albino 0.66 >More info 0.14 >More info WT aerial part Original data GEO bulk
74 COL-0-Fe--root 0.54 >More info 0.26 >More info COL-0-Ctrl--root root Original data
75 Ler hypocotyl 0.52 >More info 0.28 >More info wt hypocotyl hypocotyl Original data GEO bulk
76 Leafminer damaged seedlings 0.24 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
77 seedling 24h after Gamma atm-1 0.69 >More info 0.11 >More info seedling day 2 unirradiated atm-1 24h Original data
78 Col-0 HS 0.55 >More info 0.24 >More info Col-0 control heat shocked seedling Original data GEO bulk
79 csn4-1 mutant 0.56 >More info 0.23 >More info WT dark Original data GEO bulk
80 WT (Col-0) heat shock 0.55 >More info 0.24 >More info WT (Col-0) whole seedling Original data GEO bulk
81 abi1 hypocotyl 0.26 >More info 0.53 >More info Ler hypocotyl hypocotyl Original data GEO bulk
82 35S::PI ap3-3 35S::AP-GR +DEX 0.24 >More info 0.55 >More info 0hr DEX Original data GEO bulk
83 NJ15 0.51 >More info 0.27 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
84 Kas-1 -Fe 24h -0.17 >More info -0.61 >More info Kas-1 +Fe 24h roots Original data GEO bulk
85 Kas -Fe 24h Roots -0.17 >More info -0.61 >More info Kas +Fe 24h Roots Original data GEO bulk
86 opr3 OPDA 0.5 h 0.05 >More info 0.73 >More info opr3 0 h Original data GEO bulk
87 35S:RPS4 eds1-2 2h -0.14 >More info -0.64 >More info 35S:RPS4 2h leaves Original data
88 seedling 6h after HZE atm-1 0.64 >More info 0.13 >More info seedling day 1 unirradiated atm-1 6h Original data
89 UV Stress 24 h (shoot) 0.60 >More info 0.17 >More info Stress mock 24 h (shoot) Original data Stress treatments
90 gai Control 0.60 >More info 0.17 >More info Laer Control leaf discs Original data GEO bulk
91 WT 30μM arsenate 8 hours. 0.50 >More info 0.27 >More info WT control (not supplemented). Original data
92 myb61 xylem 0.11 >More info 0.66 >More info wt xylem xylem Original data GEO bulk
93 amiRAP aerobic -0.24 >More info -0.52 >More info WT aerobic aerobic Original data GEO bulk
94 HARAP aerobic -0.22 >More info -0.54 >More info WT aerobic aerobic Original data GEO bulk
95 phyB mutant 22C 4hrs -0.13 >More info -0.62 >More info L22-4hrs whole plant excluding roots Original data GEO bulk
96 LTN008-2 aza-dc 0.57 >More info 0.17 >More info LTN012-2 Mock Original data
97 root endodermis and quiescent center 40 mM NaCl 0.52 >More info 0.22 >More info root endodermis and quiescent center Original data GEO bulk
98 bak1-3 +Pep2 2h 0.21 >More info 0.53 >More info WT +Pep2 2h Pep2 Original data GEO bulk
99 csn4-1 dark 0.55 >More info 0.18 >More info WT light Original data GEO bulk
100 ex1 flu dark 8hours/30 minute light 0.11 >More info 0.62 >More info col dark 8hours/30 minute light Original data GEO bulk
101 oas-a1.1 Cd 18h 0.22 >More info 0.51 >More info Cd 18h root Root Original data GEO bulk
102 seedling 12h after Gamma atm-1 0.63 >More info 0.09 >More info seedling day 1 unirradiated atm-1 12h Original data
103 WT mitomycin C 0.58 >More info 0.14 >More info WT mock shoot apical meristem Original data
104 Leaf systemic 0.22 >More info 0.50 >More info Leaf control vegetative leaf Original data GEO bulk
105 Col-0 norflurazon 0.52 >More info 0.19 >More info Col-0 control Original data GEO bulk
106 low CO2 + dark 0.21 >More info 0.50 >More info normal CO2 + light Original data GEO bulk
107 siliques AtHb1 control 0.18 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
108 WT flg22 2h 0.53 >More info 0.15 >More info WT 0h Leaf tissue Original data GEO bulk
109 control leaf (cmt 5d) -0.50 >More info -0.18 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
110 dorn1-1 Root 100 mM ATP 30 min -0.07 >More info -0.61 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
111 Methyl Jasmonate 3 h -0.05 >More info -0.62 >More info Mock 3 h Original data Basic hormone treatment of seedlings
112 Col BTH 0.00 >More info 0.67 >More info Col rosettes Original data GEO bulk
113 ice1 control 0.57 >More info 0.09 >More info WT control Original data GEO bulk
114 seedling 3h after HZE WT 0.63 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
115 35S::RSL4 -0.11 >More info -0.54 >More info Col-0 Control root Original data GEO bulk
116 Col-0 (t-zeatin 3 h) -0.08 >More info -0.54 >More info Col-0 Original data Cytokinin treatment of seedlings
117 seedling 1.5h after Gamma atm-1 0.67 >More info -0.06 >More info seedling day 1 unirradiated atm-1 1.5h Original data
118 dark-hs 0.50 >More info 0.11 >More info dark-control seedling Original data
119 PstDC3000 48h 0.09 >More info 0.52 >More info WT untreated 48hr leaf Original data GEO bulk
120 npr1-3 DCA 48h 0.02 >More info 0.58 >More info npr1-3 MOCK 48h Original data GEO bulk
121 myb61 cork -0.01 >More info 0.61 >More info wt cork cork Original data GEO bulk
122 seedling 24h after Gamma WT 0.64 >More info -0.08 >More info seedling day 2 unirradiated WT 24h Original data
123 OsSAP11 expressing -0.02 >More info -0.54 >More info WT seedlings Original data GEO bulk
124 camta3-1 0.04 >More info 0.51 >More info WT Original data GEO bulk
125 seed germinating in countinuous light 24h SL -0.13 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
126 35S:RPS4 rrs1-11 T0 0.04 >More info 0.50 >More info 35S:RPS4 T0 leaves Original data
127 Shoot apex inflorescence (after bolting) -0.12 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
128 estradiole-induced ANAC059 0.00 >More info 0.53 >More info transgenic (empty vector inducible system) Original data GEO bulk
129 opr3 JA 2 h 0.02 >More info -0.55 >More info opr3 0 h Original data GEO bulk
130 irradiated leaf (WT 5d) 0.54 >More info -0.04 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
131 pnp1-1 1wk +P 0.50 >More info -0.01 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
132 bri1-116 -0.24 >More info 0.73 >More info Col seedling Original data GEO bulk
133 Methyl Jasmonate 1 h 0.08 >More info -0.57 >More info Mock 1 h Original data Basic hormone treatment of seedlings
134 ptpks2 0.07 >More info -0.54 >More info Col-WT leaves Original data GEO bulk
135 IAA7mII over-expressor IAA Treated -0.22 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
136 root longitudinal zone-2 pH 4.6 -0.05 >More info 0.50 >More info root longitudinal zone-2 pH 5.7 Original data GEO bulk
137 vtc1-1 -0.16 >More info 0.60 >More info Col-0 whole plant Original data GEO bulk
138 aux1 mutant roots ethylene -0.13 >More info 0.55 >More info roots air Original data GEO bulk
139 CCA1-ox 6am non-polysomal -0.14 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
140 12h-DC3000 avrRpm1 0.15 >More info -0.50 >More info 12h-DC3000 leaves Original data GEO bulk