4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Cd 18h root
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List of experiments correlated with "Cd 18h root"  Help Download transcriptome of top 30
Score Experiment Correlation from
Cd 18h root		 Correlation to
Cd 18h root		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Cd 18h root 1.00 >More info 1.00 >More info WT-Untreated Root Original data GEO bulk
2 oas-a1.1 root 0.62 >More info 0.80 >More info WT-Untreated Root Original data GEO bulk
3 Mutant lwd1_lwd2 -0.58 >More info -0.73 >More info Wildtype for phy mutants Original data GEO bulk
4 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 -0.58 >More info -0.73 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
5 Atss3 Light1 0.67 >More info 0.59 >More info Atss3 Dark0.5 Original data GEO bulk
6 Root dark control 7h -0.72 >More info -0.54 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
7 8 hr ammonium -0.70 >More info -0.56 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
8 mil4 sid2 -0.69 >More info -0.56 >More info Col rosettes Original data GEO bulk
9 OsRLCK253 expressing 0.64 >More info 0.59 >More info WT seedlings Original data GEO bulk
10 toc1-1-77hr -0.62 >More info -0.60 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
11 Pseudomonas -0.57 >More info -0.65 >More info Control pseudomonas treated whole seedling Original data GEO bulk
12 Whole root - S 3H 0.49 >More info 0.71 >More info Whole root - S 0H Original data GEO bulk
13 Col(gl) 0mM NaCl -0.65 >More info -0.54 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
14 Col(gl) leaf 0mM NaCl -0.65 >More info -0.54 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
15 MIL4 ox -0.69 >More info -0.50 >More info Col Original data GEO bulk
16 Shoot dark control 7h -0.70 >More info -0.48 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
17 tmm1-inflorescence-tips 0.47 >More info 0.71 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
18 seedling 1.5h after HZE atm-1 -0.66 >More info -0.50 >More info seedling day 1 unirradiated atm-1 1.5h Original data
19 Root submergence 7h -0.73 >More info -0.43 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
20 vte1-1 3d vernalization 0.66 >More info 0.48 >More info WT 3d vernalization Original data GEO bulk
21 seedling 12h after HZE atm-1 -0.60 >More info -0.54 >More info seedling day 1 unirradiated atm-1 12h Original data
22 Night Time Treatment 0.56 >More info 0.57 >More info Night Time Control 1hr white light pulse aerial rosette Original data
23 dde2-2 24hpi A. brassicicola 0.58 >More info 0.55 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
24 M6PR transgenic leaf 0mM NaCl -0.64 >More info -0.49 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
25 8 hr nitrate -0.67 >More info -0.45 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
26 MYB12OX/tt4 -0.64 >More info -0.48 >More info Col-0 aerial part Original data
27 Root dark control 24h -0.63 >More info -0.49 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
28 Laer Flg22(Agrobacterium) 2h -0.54 >More info -0.58 >More info Laer Control leaf discs Original data GEO bulk
29 ein2-1 24hpi A. brassicicola 0.57 >More info 0.55 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
30 AmGSTF1 expressor -0.59 >More info -0.53 >More info WT leaf tissue Original data GEO bulk
31 sdg8-2 mutant 0.66 >More info 0.46 >More info wild type leaf Original data GEO bulk
32 pap1-D/tt4 -0.62 >More info -0.48 >More info Col-0 aerial part Original data
33 Root submergence 24h -0.64 >More info -0.45 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
34 FarRed Light 45min -0.39 >More info -0.69 >More info White Light 45min Original data Light treatments
35 Dark 6h ivd -0.61 >More info -0.46 >More info 0h ivd Original data
36 toc1-1-89hr 0.46 >More info 0.61 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
37 myb61 xylem -0.57 >More info -0.49 >More info wt xylem xylem Original data GEO bulk
38 dor control 0.62 >More info 0.44 >More info WT control Original data GEO bulk
39 WT Na2S 0.52 >More info 0.53 >More info WT water Na2S leaf Original data GEO bulk
40 seedling 1.5h after HZE WT -0.64 >More info -0.41 >More info seedling day 1 unirradiated WT 1.5h Original data
41 downy mildew cotyledons late stage 0.53 >More info 0.52 >More info mock inoculated Cotyledons Original data GEO bulk
42 tt4 -0.60 >More info -0.45 >More info Col-0 aerial part Original data
43 sid2-2 24hpi A. brassicicola 0.56 >More info 0.47 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
44 Col(gl) leaf 100mM NaCl -0.63 >More info -0.40 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
45 Col(gl) 100mM NaCl -0.63 >More info -0.40 >More info Col 100mM NaCl 100mM NaCl leaf Original data GEO bulk
46 Whole root - S 12H 0.53 >More info 0.50 >More info Whole root - S 0H Original data GEO bulk
47 Dark 6h hml -0.63 >More info -0.39 >More info 0h hml Original data
48 toc1-1-53hr -0.66 >More info -0.36 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
49 Dark 1day ivd -0.64 >More info -0.37 >More info 0h ivd Original data
50 cca1-lhy 60m light -0.45 >More info -0.56 >More info 60m light whole seedlings Original data GEO bulk
51 20h Col-0 -0.46 >More info -0.55 >More info 00h Col-0 Original data GEO bulk
52 seedling 12h after Gamma atm-1 -0.53 >More info -0.47 >More info seedling day 1 unirradiated atm-1 12h Original data
53 lht1 untreated 0.53 >More info 0.47 >More info WT untreated untreated leaf Original data GEO bulk
54 Dark 6h wt -0.64 >More info -0.36 >More info 0h wt Original data
55 inhibitor A Treated 0.62 >More info 0.37 >More info Negative Control Original data GEO bulk
56 WOX1-1 -0.57 >More info -0.42 >More info Col-0 aerial part Original data
57 pip3 At2g19270 RNAi 24 0.53 >More info 0.45 >More info Nd-1 whole plant Original data GEO bulk
58 Atss3 Light4 0.55 >More info 0.43 >More info Atss3 Dark0.5 Original data GEO bulk
59 mil4 -0.57 >More info -0.41 >More info Col rosettes Original data GEO bulk
60 Dark 1day wt -0.64 >More info -0.34 >More info 0h wt Original data
61 CBF3 0mM NaCl -0.59 >More info -0.38 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
62 sid2 -0.56 >More info -0.41 >More info Col rosettes Original data GEO bulk
63 seedling 12h after Gamma WT -0.59 >More info -0.38 >More info seedling day 1 unirradiated WT 12h Original data
64 Dark 1day hml -0.63 >More info -0.34 >More info 0h hml Original data
65 Shoot dark control 24h -0.54 >More info -0.43 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
66 60m light 0.52 >More info 0.44 >More info before light whole seedlings Original data GEO bulk
67 16h Col-0 -0.43 >More info -0.53 >More info 00h Col-0 Original data GEO bulk
68 1 h Light Total RNA 0.45 >More info 0.51 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
69 gun1-9 control 0.55 >More info 0.40 >More info Col-0 control Original data GEO bulk
70 essp4/sdg8-5 mutant 0.54 >More info 0.41 >More info wild type leaf Original data GEO bulk
71 oas-a1.1 Cd 18h -0.64 >More info -0.31 >More info Cd 18h root Root Original data GEO bulk
72 M6PR transgenic 0mM NaCl -0.56 >More info -0.38 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
73 gun5 control 0.59 >More info 0.35 >More info Col-0 control Original data GEO bulk
74 ANOXIA -0.20 >More info -0.74 >More info ANOXIA+SUCROSE Original data GEO bulk
75 Day Time Treatment 0.43 >More info 0.51 >More info Day Time Control 1hr white light pulse aerial rosette Original data
76 Red/FR Light45min 0.14 >More info 0.78 >More info FarRed Light 45min Original data Light treatments
77 shl-2 Pool -0.55 >More info -0.36 >More info Ler Pool seedling Original data GEO bulk
78 WT +elf18 10h -0.61 >More info -0.30 >More info WT untreated elf18 Original data GEO bulk
79 Red Light 4 h -0.31 >More info -0.60 >More info White Light 4 h Original data Light treatments
80 Octopus mutant DYG25 0.56 >More info 0.34 >More info WS Original data GEO bulk
81 WT 90-105 min Xanthomonas 0.56 >More info 0.34 >More info WT T0 Original data GEO bulk
82 hen1 0.62 >More info 0.28 >More info Ler Original data GEO bulk
83 tetraploid -0.50 >More info -0.40 >More info diploid Original data GEO bulk
84 CBF3 100mM NaCl -0.65 >More info -0.25 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
85 des1 water 0.51 >More info 0.39 >More info WT water water leaf Original data GEO bulk
86 WT +Pep2 10h -0.63 >More info -0.27 >More info WT untreated Pep2 Original data GEO bulk
87 aba2 1% sucrose 12-day-old -0.55 >More info -0.35 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
88 npr1 sni1 ssn2 SA -0.55 >More info -0.34 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
89 mutant acs6E (single mutant) 0.55 >More info 0.34 >More info col control (single mutant) Original data GEO bulk
90 OsSAP11 expressing 0.53 >More info 0.36 >More info WT seedlings Original data GEO bulk
91 IAA/inhibitor A Treated 0.58 >More info 0.31 >More info IAA Treated Original data GEO bulk
92 cat2-2; 8h switch to ambient CO2 concentrations; 0.30 >More info 0.58 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
93 Shoot submergence 24h -0.54 >More info -0.33 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
94 ptpks2 0.19 >More info 0.68 >More info Col-WT leaves Original data GEO bulk
95 max3GR24 (1 uM) 0.50 >More info 0.37 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
96 phr1 phl1 Shoot-Pi -0.50 >More info -0.37 >More info WT Shoot-Pi shoots Original data GEO bulk
97 lht1 PstDC3000 48h 0.51 >More info 0.36 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
98 seedling 24h after Gamma atm-1 0.36 >More info 0.51 >More info seedling day 2 unirradiated atm-1 24h Original data
99 phyB mutant 16C 4hrs -0.56 >More info -0.30 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
100 seed germinating in countinuous light 24h SL 0.19 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
101 rdr1-1 0.50 >More info 0.36 >More info Col-0 Original data GEO bulk
102 WT cold 12 h -0.55 >More info -0.30 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
103 rao1-2 0.56 >More info 0.29 >More info Col-Luc WT mock water control treatment 3 hours whole green tissue Original data GEO bulk
104 Dark 2day wt -0.60 >More info -0.25 >More info 0h wt Original data
105 iron minus 6 h 0.66 >More info 0.18 >More info iron +6 h root Original data GEO bulk
106 Col-0 DCA 6d -0.56 >More info -0.28 >More info Col-0 MOCK 6d Original data GEO bulk
107 light-hs 0.51 >More info 0.33 >More info light-control seedling Original data
108 ga1-3 SCL3OE 0.56 >More info 0.28 >More info ga1-3 whole root Original data
109 Cs root 0.34 >More info 0.50 >More info control root Original data GEO bulk
110 MIL4 ox BTH -0.54 >More info -0.29 >More info Col BTH Original data GEO bulk
111 opr3 OPDA 0.5 h -0.28 >More info -0.55 >More info opr3 0 h Original data GEO bulk
112 Dark 3day hml -0.61 >More info -0.22 >More info 0h hml Original data
113 Nicotinamide-73hr -0.55 >More info -0.27 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
114 upf1 0.57 >More info 0.25 >More info WT whole plant Original data GEO bulk
115 anac017-1 AntimycinA 3h -0.51 >More info -0.30 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
116 seedling 24h after Gamma WT 0.30 >More info 0.51 >More info seedling day 2 unirradiated WT 24h Original data
117 Dark 2day hml -0.59 >More info -0.22 >More info 0h hml Original data
118 -Sulfate 24 h 0.08 >More info 0.73 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
119 Dark 3day wt -0.60 >More info -0.20 >More info 0h wt Original data
120 WT Shoot-Pi 0.50 >More info 0.30 >More info WT Shoot+Pi shoots Original data GEO bulk
121 current injection 0.50 >More info 0.30 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
122 abi4 vtc2 (I) -0.51 >More info -0.29 >More info Col (I) rosette Original data GEO bulk
123 P.p 10.5hai -0.57 >More info -0.23 >More info At-Control roots Original data GEO bulk
124 seedling 12h after HZE WT -0.54 >More info -0.25 >More info seedling day 1 unirradiated WT 12h Original data
125 Col-0 INA 6d -0.59 >More info -0.20 >More info Col-0 MOCK 6d Original data GEO bulk
126 sfr2 control 0.56 >More info 0.23 >More info WT control All aerial tissue Original data GEO bulk
127 npr1-3 MOCK 48h 0.58 >More info 0.21 >More info Col-0 MOCK 48h Original data GEO bulk
128 aerial organ callus inducing medium 12 h -0.53 >More info -0.24 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
129 seedling 6h after HZE WT -0.53 >More info -0.24 >More info seedling day 1 unirradiated WT 6h Original data
130 Dark 3day ivd -0.55 >More info -0.21 >More info 0h ivd Original data
131 swn-7 -0.50 >More info -0.26 >More info Col whole plant Original data GEO bulk
132 seedling -S Exp 0.18 >More info 0.58 >More info seedling FN Exp seedling Original data
133 rdr2-1 0.50 >More info 0.24 >More info Col-0 Original data GEO bulk
134 long 14-degree- 0.22 >More info 0.52 >More info control long Original data GEO bulk
135 bbx24 in With Light -0.22 >More info -0.52 >More info WT in With Light light seedling Original data
136 root - 08% oxygen - 30min 0.64 >More info 0.09 >More info root - 21% oxygen - 30min Original data GEO bulk
137 ced1 0.59 >More info 0.14 >More info WT PEG 6hr seedlings Original data GEO bulk
138 SOS1 100mM NaCl -0.53 >More info -0.18 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
139 3x(m) -0.09 >More info -0.62 >More info 2x two week old seedlings Original data
140 Nicotinamide-49hr -0.54 >More info -0.16 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
141 Bay-0-3h IAA -0.51 >More info -0.19 >More info Bay-0-0h IAA whole plant Original data GEO bulk
142 bak1-3 untreated 0.11 >More info 0.59 >More info WT untreated untreated Original data GEO bulk
143 bri1-116 -0.04 >More info 0.73 >More info Col seedling Original data GEO bulk
144 Shoot apex inflorescence (after bolting) 0.03 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
145 NJ15 -0.03 >More info 0.71 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
146 WT (Col-0) inflorescence well-watered day 3 0.50 >More info 0.17 >More info WT (Col-0) inflorescence well-watered day 0 Unopen flower buds Original data GEO bulk
147 Shoot submergence 7h -0.67 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
148 seedling 3h after HZE WT -0.68 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
149 3x(p) -0.10 >More info -0.55 >More info 2x two week old seedlings Original data
150 IAA7mII over-expressor IAA Treated -0.06 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
151 ms1 unpollinated 0.56 >More info 0.06 >More info WT 8h-pollinated pistil Original data GEO bulk
152 short 17-degree- -0.03 >More info 0.65 >More info control short Original data GEO bulk
153 Dark 2day ivd -0.59 >More info -0.01 >More info 0h ivd Original data
154 abi1 hypocotyl -0.54 >More info -0.03 >More info Ler hypocotyl hypocotyl Original data GEO bulk
155 phyB mutant 16C 10hrs 0.55 >More info 0.02 >More info 16C 10h whole plant excluding roots Original data GEO bulk
156 Light 3day hml 0.07 >More info 0.50 >More info 0h hml Original data
157 siliques AtHb1 control 0.03 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
158 root epidermis and lateral root cap 40 mM NaCl -0.50 >More info -0.02 >More info root epidermis and lateral root cap Original data GEO bulk
159 Blue Light 45 min -0.01 >More info -0.50 >More info White Light 45min Original data Light treatments
160 Heat shock optimum -0.14 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
161 short 12-degree- -0.01 >More info 0.51 >More info control short Original data GEO bulk
162 Col0-PsmES4326-24hpi -0.12 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
163 CCA1-ox 6am non-polysomal -0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
164 root - 08% oxygen - 2h -0.05 >More info 0.53 >More info root - 21% oxygen - 2h Original data GEO bulk
165 Cs shoot -0.10 >More info 0.53 >More info control shoot Original data GEO bulk
166 GRX-overexpression seedlings NaCl -0.10 >More info 0.53 >More info WT seedlings NaCl Seedlings Original data GEO bulk
167 hsfa2 KO -0.52 >More info 0.12 >More info WT (Col-0) whole seedling Original data GEO bulk
168 Laer pretreat GA Flg22 1h -0.33 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
169 Col BTH -0.30 >More info 0.67 >More info Col rosettes Original data GEO bulk
170 light 0.54 >More info -0.18 >More info dark light seedling Original data GEO bulk
171 GA 120min -0.27 >More info 0.61 >More info CON120 GA 120 min. root tips Original data GEO bulk
172 Leafminer damaged seedlings -0.41 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk