4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on etiolated cop1
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List of experiments correlated with "etiolated cop1"  Help Download transcriptome of top 30
Score Experiment Correlation from
etiolated cop1		 Correlation to
etiolated cop1		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 etiolated cop1 1.00 >More info 1.00 >More info etiolated Col-0 whole seedlings Original data GEO bulk
2 etiolated cop1BBX22-GFPox 0.04 >More info 0.89 >More info etiolated Col-0 whole seedlings Original data GEO bulk
3 WT(Ler) Rc50 0.04 >More info 0.83 >More info WT(Ler) Dark Original data GEO bulk
4 WT Rc50 0.04 >More info 0.82 >More info WT Dark red light whole seedling Original data GEO bulk
5 phyB Dark 0.04 >More info 0.79 >More info WT(Ler) Dark Original data GEO bulk
6 WT(Ler) Rc15 0.04 >More info 0.78 >More info WT(Ler) Dark Original data GEO bulk
7 21h-DC3000 avrRpm1 0.04 >More info 0.73 >More info 21h-DC3000 leaves Original data GEO bulk
8 bri1-116 0.04 >More info 0.73 >More info Col seedling Original data GEO bulk
9 Light 4h steady-state 0.04 >More info 0.73 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
10 Light 4h polysome-bound 0.04 >More info 0.73 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
11 WT light 0.04 >More info 0.73 >More info WT dark Original data GEO bulk
12 WT Red light 18h 0.04 >More info 0.72 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
13 Laer pretreat GA Flg22 1h 0.04 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
14 phyAphyB Dark 0.04 >More info -0.79 >More info phyB Dark Original data GEO bulk
15 WT Seedling BL 0.04 >More info 0.71 >More info WT Seedling Dark Original data GEO bulk
16 csn5 (csn5a-2 csn5b) dark 0.04 >More info 0.71 >More info WT dark Original data GEO bulk
17 csn4-1 mutant 0.04 >More info 0.71 >More info WT dark Original data GEO bulk
18 csn3-1 dark 0.04 >More info 0.71 >More info WT dark Original data GEO bulk
19 CabpBVR2 0.04 >More info -0.78 >More info WT Original data GEO bulk
20 cop1 Seedling Dark 0.04 >More info 0.70 >More info WT Seedling Dark Original data GEO bulk
21 Dark 4 h pls RedLight 1min 0.04 >More info 0.69 >More info Dark 4 h Original data Light treatments
22 IAA7mII over-expressor IAA Treated 0.04 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
23 atmyc2 cop1 Seedling Dark 0.04 >More info 0.68 >More info WT Seedling Dark Original data GEO bulk
24 seed germinating in countinuous light 24h SL 0.04 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
25 Col BTH 0.04 >More info 0.67 >More info Col rosettes Original data GEO bulk
26 Red Light 45min 0.04 >More info -0.74 >More info White Light 45min Original data Light treatments
27 35SpBVR3 0.04 >More info -0.74 >More info WT Original data GEO bulk
28 Shoot apex inflorescence (after bolting) 0.04 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
29 Heat shock optimum 0.04 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
30 root cortex pH4.6 0.04 >More info 0.65 >More info root cortex pH5.7 Original data GEO bulk
31 dorn1-1 Root MES buffer 30 min 0.04 >More info 0.65 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
32 FarRed Light 4 h 0.04 >More info 0.64 >More info White Light 4 h Original data Light treatments
33 seedling h S Exp 0.04 >More info 0.64 >More info seedling -S Exp seedling Original data
34 Dark 4 h pls UV-AB 5min 0.04 >More info 0.63 >More info Dark 4 h Original data Light treatments
35 L2.4 mutant 0.04 >More info 0.63 >More info Wt Original data GEO bulk
36 axr2 0.04 >More info 0.63 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
37 Inflorescences Trp1 0.04 >More info 0.63 >More info Inflorescences ler inflorescences Original data GEO bulk
38 Blue Light 4 h 0.04 >More info 0.62 >More info White Light 4 h Original data Light treatments
39 Col0-PsmES4326-24hpi 0.04 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
40 Red/FR Light 4 h 0.04 >More info -0.68 >More info FarRed Light 4 h Original data Light treatments
41 pif4pif5 mut 24h FR 0.04 >More info 0.60 >More info WT 24h FR Original data GEO bulk
42 AtGATA2ox 0.04 >More info 0.59 >More info Col seedling Original data GEO bulk
43 WT Red light 1h 0.04 >More info 0.59 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
44 cop1 Seedling BL+ABA 0.04 >More info 0.59 >More info WT Seedling BL+ABA Original data GEO bulk
45 Dark 4 h pls UV-A 5 min 0.04 >More info 0.57 >More info Dark 4 h Original data Light treatments
46 T6 leaf-drought 0.04 >More info -0.65 >More info T6 leaf-well watered Original data GEO bulk
47 Laer Flg22(Agrobacterium) 2h 0.04 >More info 0.57 >More info Laer Control leaf discs Original data GEO bulk
48 Light 0.5h polysome-bound 0.04 >More info 0.57 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
49 low CO2 + dark 0.04 >More info -0.65 >More info normal CO2 + light Original data GEO bulk
50 Col leaves 120h LT 0.04 >More info 0.57 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
51 Mutant sav3-2 (SH) 0.04 >More info 0.56 >More info Col-0 (SH) Original data GEO bulk
52 Mutant sav3-2 (WL) 0.04 >More info 0.56 >More info Col-0 (WL) Original data GEO bulk
53 red illumination +lincomycin 0.04 >More info 0.56 >More info red illumination -lincomycin Original data GEO bulk
54 sav3-2 light 0.04 >More info 0.56 >More info Col-0 light seedlings Original data GEO bulk
55 sav3-2 shade 0.04 >More info 0.56 >More info Col-0 shade seedlings Original data GEO bulk
56 Leafminer damaged seedlings 0.04 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
57 axr2-BR 0.04 >More info 0.55 >More info BR BR dark-grown seedlings Original data GEO bulk
58 prors1-2 leaves 0.04 >More info 0.55 >More info Col-0 leaves leaves Original data
59 Dark 44min pls RedLigh 1min 0.04 >More info 0.54 >More info Dark 45 min Original data Light treatments
60 Dark 40 min pls UV-A 5 min 0.04 >More info 0.54 >More info Dark 45 min Original data Light treatments
61 erf104-ko H2O 4h 0.04 >More info 0.54 >More info Col-0 H2O 4h Original data GEO bulk
62 root epidermis and lateral root cap -S 0.04 >More info 0.54 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
63 CCA14 dark late 0.04 >More info -0.62 >More info Col dark late Original data GEO bulk
64 pif4pif5 mut 1h FR 0.04 >More info 0.53 >More info WT 1h FR Original data GEO bulk
65 21h-DC3000 hrpA 0.04 >More info 0.53 >More info 21h-DC3000 leaves Original data GEO bulk
66 Light 0.5h steady-state 0.04 >More info 0.53 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
67 WT 30μM phosphate 8 hours. 0.04 >More info 0.53 >More info WT control (not supplemented). Original data
68 ptpks2 0.04 >More info 0.52 >More info Col-WT leaves Original data GEO bulk
69 siliques AtHb1 control 0.04 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
70 root stele -S 0.04 >More info 0.52 >More info root stele pH5.7 Original data GEO bulk
71 WT cold 24h 0.04 >More info 0.52 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
72 35S::PI ap3-3 35S::AP-GR +DEX 0.04 >More info 0.52 >More info 0hr DEX Original data GEO bulk
73 seedling 24h after Gamma WT 0.04 >More info 0.52 >More info seedling day 2 unirradiated WT 24h Original data
74 2d dark-grown WT(Col-0)/1 hr red light 0.04 >More info 0.51 >More info 2d dark-grown WT seedling Original data GEO bulk
75 irradiated leaf (WT 1d) 0.04 >More info 0.51 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
76 S14-150 0.04 >More info 0.51 >More info wt Original data GEO bulk
77 CCA1-ox 6am non-polysomal 0.04 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
78 ABA 1 h 0.04 >More info -0.59 >More info Mock 1 h Original data Basic hormone treatment of seedlings
79 Red Light 4 h 0.04 >More info -0.59 >More info White Light 4 h Original data Light treatments
80 35S:VND7-VP16-GR+CHX 0.04 >More info -0.59 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
81 cdpk6-yfp 0.04 >More info 0.50 >More info Kan seedlings Original data GEO bulk
82 sfr6 cold 0.04 >More info 0.50 >More info WT cold All aerial tissue Original data GEO bulk
83 sav1-1 light 0.04 >More info 0.50 >More info Col-0 light seedlings Original data GEO bulk
84 SHR-GR Time 3H Dex 0.04 >More info -0.58 >More info SHR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
85 npr1 0.04 >More info -0.58 >More info WT(COL) Original data GEO bulk
86 aerial organ callus inducing medium 96 h 0.04 >More info -0.57 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
87 TNT-seedlings 0.04 >More info -0.56 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
88 eto1-4 + AVG 0.04 >More info -0.56 >More info eto1-4 whole seedling Original data GEO bulk
89 Seedling KUA1-IOX est 0.04 >More info -0.56 >More info Seedling KUA1-IOX mock Original data
90 Chemically 0.04 >More info -0.56 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
91 35S::MBF1c 0.04 >More info -0.55 >More info control Original data GEO bulk
92 Mutant ga1-5 0.04 >More info -0.53 >More info Ler-1 Original data Comparison of plant hormone related mutant
93 35:SUB1C 0.04 >More info -0.52 >More info WT whole seedling Original data GEO bulk
94 low CO2 + light 0.04 >More info -0.52 >More info normal CO2 + light Original data GEO bulk
95 QC pSCR(QC pSCRBRI1) 3h BL 0.04 >More info -0.51 >More info QC pSCR(QC pSCRBRI1) 0h BL brassinosteroid root Original data
96 tetraploid 0.04 >More info -0.51 >More info diploid Original data GEO bulk
97 Mutant cry1 (High Light) 0.04 >More info -0.50 >More info Col-0 (High Light) Original data GEO bulk
98 root longitudinal zone-3 -Fe 0.04 >More info -0.50 >More info root longitudinal zone-3 standard Original data GEO bulk
99 cry1 high light 0.04 >More info -0.50 >More info Col-O high light Original data GEO bulk
100 xyl-grown cell culture- 1h 1mM Glc 0.04 >More info -0.50 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data