4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on mil4 sid2
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List of experiments correlated with "mil4 sid2"  Help Download transcriptome of top 30
Score Experiment Correlation from
mil4 sid2		 Correlation to
mil4 sid2		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 mil4 sid2 1.00 >More info 1.00 >More info Col rosettes Original data GEO bulk
2 sid2 0.91 >More info 0.90 >More info Col rosettes Original data GEO bulk
3 MIL4 ox 0.91 >More info 0.90 >More info Col Original data GEO bulk
4 mil4 0.85 >More info 0.85 >More info Col rosettes Original data GEO bulk
5 Pseudomonas 0.80 >More info 0.87 >More info Control pseudomonas treated whole seedling Original data GEO bulk
6 MYB12OX/tt4 0.80 >More info 0.83 >More info Col-0 aerial part Original data
7 pap1-D/tt4 0.78 >More info 0.81 >More info Col-0 aerial part Original data
8 tt4 0.77 >More info 0.82 >More info Col-0 aerial part Original data
9 Shoot dark control 7h 0.77 >More info 0.74 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
10 mil4 BTH 0.76 >More info 0.68 >More info Col BTH rosettes Original data GEO bulk
11 MIL4 ox BTH 0.76 >More info 0.68 >More info Col BTH Original data GEO bulk
12 Col(gl) leaf 100mM NaCl 0.75 >More info 0.68 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
13 Col(gl) 100mM NaCl 0.75 >More info 0.68 >More info Col 100mM NaCl 100mM NaCl leaf Original data GEO bulk
14 WOX1-1 0.69 >More info 0.74 >More info Col-0 aerial part Original data
15 mutant acs9B (single mutant) 0.72 >More info 0.67 >More info col control (single mutant) Original data GEO bulk
16 Night Time Treatment -0.67 >More info -0.71 >More info Night Time Control 1hr white light pulse aerial rosette Original data
17 mutant acs2C (single mutant) 0.71 >More info 0.66 >More info col control (single mutant) Original data GEO bulk
18 Shoot dark control 24h 0.71 >More info 0.65 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
19 mkk2 control rep 0.66 >More info 0.69 >More info Col-0 Time 0 rep Original data GEO bulk
20 Shoot submergence 24h 0.72 >More info 0.62 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
21 Day Time Treatment -0.66 >More info -0.67 >More info Day Time Control 1hr white light pulse aerial rosette Original data
22 TaFLS overexpression line (OE2) 0.69 >More info 0.64 >More info Col-0 Rosette leaves Original data
23 WT-Dry -0.64 >More info -0.66 >More info WT-CK dehydration treatment 1h Original data
24 Col BTH 0.61 >More info 0.67 >More info Col rosettes Original data GEO bulk
25 seedling 1.5h after HZE atm-1 0.61 >More info 0.67 >More info seedling day 1 unirradiated atm-1 1.5h Original data
26 Atss3 Light4 -0.62 >More info -0.64 >More info Atss3 Dark0.5 Original data GEO bulk
27 Atss3 Light1 -0.56 >More info -0.70 >More info Atss3 Dark0.5 Original data GEO bulk
28 sfr2 control -0.69 >More info -0.57 >More info WT control All aerial tissue Original data GEO bulk
29 Cd 18h root -0.56 >More info -0.69 >More info WT-Untreated Root Original data GEO bulk
30 cpr5 sim smr1 0.55 >More info 0.67 >More info WT seedling Original data GEO bulk
31 sim smr1 0.56 >More info 0.66 >More info WT seedling Original data GEO bulk
32 E.orontii Infection 3 day 0.57 >More info 0.63 >More info Uninfection 3 day Original data Elicitor treatments
33 E.orontii Infection 6 h 0.56 >More info 0.63 >More info Uninfection 6 h Original data Elicitor treatments
34 pXVE:HA-EDM2-a untreated 0.57 >More info 0.61 >More info Col-0 untreated seedlings Original data GEO bulk
35 shl-2 Pool 0.61 >More info 0.56 >More info Ler Pool seedling Original data GEO bulk
36 Dark 6h ivd 0.59 >More info 0.58 >More info 0h ivd Original data
37 Root submergence 7h 0.64 >More info 0.53 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
38 tmm1-inflorescence-tips -0.47 >More info -0.70 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
39 ein2-1 24hpi A. brassicicola -0.49 >More info -0.65 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
40 arr10 arr12 -0.56 >More info -0.57 >More info WT Original data GEO bulk
41 Leaf systemic -0.51 >More info -0.62 >More info Leaf control vegetative leaf Original data GEO bulk
42 seedling 24h after Gamma atm-1 -0.53 >More info -0.60 >More info seedling day 2 unirradiated atm-1 24h Original data
43 Leaf wounded -0.58 >More info -0.55 >More info Leaf control vegetative leaf Original data GEO bulk
44 Dark 1day ivd 0.65 >More info 0.47 >More info 0h ivd Original data
45 mkk2 24h BTH rep 0.58 >More info 0.54 >More info Col-0 24h BTH rep Original data GEO bulk
46 pap1-D 0.53 >More info 0.59 >More info Col-0 aerial part Original data
47 gun5 control -0.55 >More info -0.56 >More info Col-0 control Original data GEO bulk
48 swn-7 0.55 >More info 0.56 >More info Col whole plant Original data GEO bulk
49 WT drought -0.44 >More info -0.67 >More info WT control All aerial tissue Original data GEO bulk
50 Col(gl) 0mM NaCl 0.57 >More info 0.54 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
51 fls1-3 0.59 >More info 0.52 >More info Col-0 Rosette leaves Original data
52 seedling 24h after Gamma WT -0.57 >More info -0.54 >More info seedling day 2 unirradiated WT 24h Original data
53 Col(gl) leaf 0mM NaCl 0.57 >More info 0.54 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
54 aerial organ callus inducing medium 12 h 0.53 >More info 0.57 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
55 Col-0 DEX Shade 0.60 >More info 0.50 >More info Col-0 DEX WL seedlings Original data
56 AmGSTF1 expressor 0.52 >More info 0.58 >More info WT leaf tissue Original data GEO bulk
57 wnk8-2 untreated 0.55 >More info 0.55 >More info Col-0 untreated seedlings Original data GEO bulk
58 seedling 1.5h after HZE WT 0.55 >More info 0.54 >More info seedling day 1 unirradiated WT 1.5h Original data
59 Mutant lwd1_lwd2 0.33 >More info 0.76 >More info Wildtype for phy mutants Original data GEO bulk
60 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.33 >More info 0.76 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
61 dde2-2 24hpi A. brassicicola -0.45 >More info -0.62 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
62 6h volatiles Sm. R3089 0.50 >More info 0.57 >More info 6h untreated whole seedling Original data GEO bulk
63 petiole in D 0.50 >More info 0.57 >More info petiole in WL petioles Original data GEO bulk
64 M6PR transgenic leaf 0mM NaCl 0.58 >More info 0.49 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
65 60m light -0.47 >More info -0.60 >More info before light whole seedlings Original data GEO bulk
66 Dark 1day hml 0.61 >More info 0.45 >More info 0h hml Original data
67 Dark 6h hml 0.60 >More info 0.46 >More info 0h hml Original data
68 mkk1/mkk2 control rep 0.55 >More info 0.51 >More info Col-0 Time 0 rep Original data GEO bulk
69 Dark 6h wt 0.60 >More info 0.46 >More info 0h wt Original data
70 sid2-2 24hpi A. brassicicola -0.47 >More info -0.59 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
71 Root dark control 7h 0.63 >More info 0.42 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
72 WT hypoxia 0.53 >More info 0.52 >More info WT normoxia whole rosette Original data
73 Root submergence 24h 0.57 >More info 0.47 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
74 Whole root - S 3H -0.50 >More info -0.54 >More info Whole root - S 0H Original data GEO bulk
75 Dark 1day wt 0.61 >More info 0.43 >More info 0h wt Original data
76 camta1-2 0.42 >More info 0.62 >More info Col-0-WT Original data GEO bulk
77 mkk1 control rep 0.62 >More info 0.41 >More info Col-0 Time 0 rep Original data GEO bulk
78 35S:GIF 0.58 >More info 0.45 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
79 Dark 3day hml 0.60 >More info 0.42 >More info 0h hml Original data
80 max3GR24 (1 uM) -0.57 >More info -0.44 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
81 PRR5-VP 12h light on -0.45 >More info -0.56 >More info WT 12h light on whole plant Original data GEO bulk
82 Dark 2day wt 0.61 >More info 0.39 >More info 0h wt Original data
83 pad4-est1b-1-doublemutant 0.44 >More info 0.56 >More info pad4-mutant developed rosette leaves Original data GEO bulk
84 sex1-3 0.36 >More info 0.64 >More info Col-WT leaves Original data GEO bulk
85 12h volatiles Sm. R3089 0.41 >More info 0.59 >More info 12h untreated whole seedling Original data GEO bulk
86 Light 4h steady-state -0.50 >More info -0.49 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
87 Dark 3day wt 0.59 >More info 0.40 >More info 0h wt Original data
88 Heat shock optimum 0.34 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
89 Col-0 +lincomycin 0.48 >More info 0.51 >More info Col-0 -lincomycin Original data GEO bulk
90 mkk1 24h BTH rep 0.57 >More info 0.41 >More info Col-0 24h BTH rep Original data GEO bulk
91 det2 light-dark 0.52 >More info 0.46 >More info det2 light light-dark Original data GEO bulk
92 sdg8-2 mutant -0.56 >More info -0.42 >More info wild type leaf Original data GEO bulk
93 Octopus mutant DYG25 -0.46 >More info -0.52 >More info WS Original data GEO bulk
94 Root dark control 24h 0.56 >More info 0.41 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
95 mkk1/mkk2 24h BTH rep 0.50 >More info 0.47 >More info Col-0 24h BTH rep Original data GEO bulk
96 Laer pretreat GA Flg22 1h 0.26 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
97 leaf blade in D 0.46 >More info 0.51 >More info leaf blade in WL leaf blades Original data GEO bulk
98 camta1 leaf water 0.44 >More info 0.53 >More info Col-0 leaf water leaf Original data GEO bulk
99 CBF3 100mM NaCl 0.53 >More info 0.43 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
100 4d red light grown hmr-5 seedlings 0.53 >More info 0.43 >More info 4d red light grown WT(Col-0) seedlings Original data
101 toc1-1-77hr 0.41 >More info 0.55 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
102 sfr3 control -0.43 >More info -0.53 >More info WT control All aerial tissue Original data GEO bulk
103 MYB12OX 0.44 >More info 0.52 >More info Col-0 aerial part Original data
104 Dark 3day ivd 0.55 >More info 0.40 >More info 0h ivd Original data
105 TaFLS overexpression line (OE1) 0.56 >More info 0.39 >More info Col-0 Rosette leaves Original data
106 essp3/brm5 mutant -0.57 >More info -0.38 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
107 IRP1-OE-Ctrl--shoot -0.51 >More info -0.44 >More info COL-0-Ctrl--shoot shoot Original data
108 Blue Light 4 h -0.37 >More info -0.58 >More info White Light 4 h Original data Light treatments
109 cca1-lhy 30m light 0.43 >More info 0.52 >More info 30m light whole seedlings Original data GEO bulk
110 essp4/sdg8-5 mutant -0.54 >More info -0.40 >More info wild type leaf Original data GEO bulk
111 Cd 24h root -0.38 >More info -0.56 >More info WT-Untreated Shoot Original data GEO bulk
112 Mutant lfy-12(shoot apex) -0.53 >More info -0.41 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
113 seedling SPL13 0.54 >More info 0.39 >More info seedling Col-0 Original data GEO bulk
114 oas-a1.1 root -0.38 >More info -0.55 >More info WT-Untreated Root Original data GEO bulk
115 ptpks2 -0.26 >More info -0.67 >More info Col-WT leaves Original data GEO bulk
116 Col-0 WT HL 3h -0.50 >More info -0.43 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
117 Col-0 Mock Shade 0.64 >More info 0.29 >More info Col-0 Mock WL seedlings Original data
118 mutant acs1A (single mutant) 0.57 >More info 0.36 >More info col control (single mutant) Original data GEO bulk
119 Dark 2day hml 0.59 >More info 0.34 >More info 0h hml Original data
120 toc1-1-89hr -0.32 >More info -0.61 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
121 ga1-3 scl3-1 -0.56 >More info -0.36 >More info ga1-3 whole root Original data
122 FarRed Light 4 h -0.37 >More info -0.55 >More info White Light 4 h Original data Light treatments
123 RPL18 TuMV inoculated total RNA 0.55 >More info 0.36 >More info mock inoculated total RNA PO Original data GEO bulk
124 Col-0 C2H4 24h 0.54 >More info 0.37 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
125 cpr5scv1 0.40 >More info 0.51 >More info WT(COL) Original data GEO bulk
126 gapcp1gapcp2 -0.61 >More info -0.30 >More info WT Original data GEO bulk
127 16h Col-0 0.29 >More info 0.62 >More info 00h Col-0 Original data GEO bulk
128 CDB1-Knockout 0.29 >More info 0.61 >More info WT Original data GEO bulk
129 phr1 phl1 Shoot-Pi 0.56 >More info 0.33 >More info WT Shoot-Pi shoots Original data GEO bulk
130 ceh1 mutant 0.55 >More info 0.34 >More info Parent line Original data
131 Nicotinamide-49hr 0.53 >More info 0.36 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
132 ced1 -0.52 >More info -0.37 >More info WT PEG 6hr seedlings Original data GEO bulk
133 WT 3H Cold -0.37 >More info -0.52 >More info WT control Original data GEO bulk
134 rGRF3x35S:GIF 0.51 >More info 0.36 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
135 xyl-grown cell culture- 1h 1mM Fru -0.37 >More info -0.50 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
136 vte1-1 3d vernalization -0.52 >More info -0.34 >More info WT 3d vernalization Original data GEO bulk
137 mutant acs4A (single mutant) 0.53 >More info 0.33 >More info col control (single mutant) Original data GEO bulk
138 current injection -0.50 >More info -0.36 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
139 20h Col-0 0.24 >More info 0.62 >More info 00h Col-0 Original data GEO bulk
140 seedling mSPL13 0.53 >More info 0.32 >More info seedling Col-0 Original data GEO bulk
141 RPL18 TuMV inoculated polysomal RNA 0.50 >More info 0.35 >More info mock inoculated polysomal RNA PO Original data GEO bulk
142 pip3 At2g19270 RNAi 24 -0.34 >More info -0.50 >More info Nd-1 whole plant Original data GEO bulk
143 Col-0 INA 6d 0.53 >More info 0.30 >More info Col-0 MOCK 6d Original data GEO bulk
144 Col-0 low oxygen 0.50 >More info 0.33 >More info Col-0 Original data GEO bulk
145 4C 1h -0.14 >More info -0.69 >More info 4C 0h Original data GEO bulk
146 WT Shoot-Pi -0.55 >More info -0.27 >More info WT Shoot+Pi shoots Original data GEO bulk
147 sfr6 control -0.50 >More info -0.31 >More info WT control All aerial tissue Original data GEO bulk
148 Col0-PsmES4326-24hpi 0.20 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
149 toc1-1-85hr -0.29 >More info -0.52 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
150 Red Light 4 h 0.25 >More info 0.54 >More info White Light 4 h Original data Light treatments
151 phyB mutant 16C 10hrs -0.63 >More info -0.15 >More info 16C 10h whole plant excluding roots Original data GEO bulk
152 phyB mutant 16C 4hrs 0.68 >More info 0.10 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
153 bri1-116 0.05 >More info 0.73 >More info Col seedling Original data GEO bulk
154 Kas-1 -Fe 24h 0.27 >More info 0.51 >More info Kas-1 +Fe 24h roots Original data GEO bulk
155 Kas -Fe 24h Roots 0.27 >More info 0.51 >More info Kas +Fe 24h Roots Original data GEO bulk
156 Shoot submergence 7h 0.77 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
157 L2.4 mutant -0.50 >More info -0.27 >More info Wt Original data GEO bulk
158 Shoot apex inflorescence (after bolting) 0.12 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
159 Col-0 DCA 6d 0.51 >More info 0.25 >More info Col-0 MOCK 6d Original data GEO bulk
160 short 17-degree- -0.15 >More info -0.61 >More info control short Original data GEO bulk
161 root - 04% oxygen - 2h 0.26 >More info 0.50 >More info root - 21% oxygen - 2h Original data GEO bulk
162 Heat 2 days recovery 0.51 >More info 0.23 >More info Mock 2 days recovery seedling Original data GEO bulk
163 vtc2 mature somatic embryo -0.22 >More info -0.52 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
164 Cs root -0.20 >More info -0.54 >More info control root Original data GEO bulk
165 seedling 12h after HZE atm-1 0.16 >More info 0.58 >More info seedling day 1 unirradiated atm-1 12h Original data
166 green tissue gl3 egl3 0.57 >More info 0.16 >More info green tissue WT L. er Original data GEO bulk
167 seed germinating in countinuous light 24h SL 0.05 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
168 12h-DC3000 avrRpm1 0.22 >More info 0.50 >More info 12h-DC3000 leaves Original data GEO bulk
169 light -0.53 >More info -0.18 >More info dark light seedling Original data GEO bulk
170 phyABCDE Rc50 -0.18 >More info -0.53 >More info phyABCDE Dark red light whole seedling Original data GEO bulk
171 4C 2h(SOIL) -0.10 >More info -0.61 >More info 4C 0h(SOIL) Original data GEO bulk
172 seedling 12h after Gamma atm-1 0.20 >More info 0.51 >More info seedling day 1 unirradiated atm-1 12h Original data
173 hen1 -0.52 >More info -0.17 >More info Ler Original data GEO bulk
174 short 12-degree- -0.17 >More info -0.52 >More info control short Original data GEO bulk
175 dor control -0.52 >More info -0.16 >More info WT control Original data GEO bulk
176 ANAC102 knock-out 0.16 >More info 0.52 >More info Col-0 Original data GEO bulk
177 amiRAP hypoxic 0.14 >More info 0.51 >More info hypoxic hypoxia Original data GEO bulk
178 Dark 2day ivd 0.64 >More info -0.01 >More info 0h ivd Original data
179 WT roots - Fe -0.02 >More info 0.64 >More info WT roots + Fe Roots Original data GEO bulk
180 seedling 3h after HZE WT 0.59 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
181 Leafminer damaged seedlings 0.04 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
182 anti-sense for AtAOX1a 0.06 >More info 0.53 >More info WT Original data GEO bulk
183 WT 1wk -P -0.50 >More info -0.09 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
184 IAA7mII over-expressor IAA Treated -0.10 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
185 Got7 UV -0.06 >More info -0.51 >More info Got7 mock UV seedling Original data
186 siliques AtHb1 control 0.05 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
187 ex1 flu dark 8hours/30 minute light -0.04 >More info -0.52 >More info col dark 8hours/30 minute light Original data GEO bulk
188 CCA1-ox 6am non-polysomal 0.04 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
189 Mock pft1 leaf -0.51 >More info -0.03 >More info Mock Col-0 leaf water leaf Original data GEO bulk
190 abi1 hypocotyl -0.03 >More info -0.51 >More info Ler hypocotyl hypocotyl Original data GEO bulk
191 35S:VND7-VP16-GR+CHX 0.00 >More info -0.51 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
192 sng1 0.01 >More info -0.51 >More info WT aerial region Original data GEO bulk
193 3x(m) 0.06 >More info -0.54 >More info 2x two week old seedlings Original data
194 nbp35-3/- 0.50 >More info -0.08 >More info WT whole seedling Original data GEO bulk