4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Col0 roots 2hr KNO3 nitrogen
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List of experiments correlated with "Col0 roots 2hr KNO3 nitrogen"  Help Download transcriptome of top 30
Score Experiment Correlation from
Col0 roots 2hr KNO3 nitrogen
Correlation to
Col0 roots 2hr KNO3 nitrogen
Control Experiment Genotype Treatment Tissue Link to
original data
Experimental
Category
Data set
Details
1 Col0 roots 2hr KNO3 nitrogen 1.00 >More info 1.00 >More info Col0 roots 2hr KCl control root Original data GEO bulk
2 Col 0 2h KNO3 0.76 >More info 0.69 >More info Col 0 2h KCl 5 mM KNO3 root Original data GEO bulk
3 2h KNO3 Whole root 0.72 >More info 0.62 >More info 2h KCl control Whole root Whole root Original data GEO bulk
4 IAA7mII over-expressor IAA Treated 0.55 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
5 2hr continuous KNO3 EPR cell 0.54 >More info 0.62 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
6 2hr transitory KNO3 ECR cell 0.37 >More info 0.73 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
7 Whole root - low pH 6H -0.78 >More info -0.31 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
8 Split KNO3 roots - 8hours 0.37 >More info 0.69 >More info Split KCl roots - 8hours 5mM KNO3 on ONE side for 8 hours roots Original data GEO bulk
9 root - 04% oxygen - 2h -0.38 >More info -0.66 >More info root - 21% oxygen - 2h Original data GEO bulk
10 Ws 2h KNO3 0.26 >More info 0.76 >More info Ws 2h KCl 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
11 2hr continuous KNO3 and MSX PeR cell 0.36 >More info 0.64 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
12 tZ 0.54 >More info 0.44 >More info DMSO--WT trans-zeatin roots Original data GEO bulk
13 root - 08% oxygen - 2h -0.34 >More info -0.64 >More info root - 21% oxygen - 2h Original data GEO bulk
14 Var2-1 roots 2hr KNO3 nitrogen -0.79 >More info -0.17 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
15 WT NAA 1h -0.60 >More info -0.36 >More info WT 0h Leaf tissue Original data GEO bulk
16 Roots Cd 0.63 >More info 0.33 >More info Roots control Cd Root Original data GEO bulk
17 MPK6 ox Shoot Hypoxia -0.35 >More info -0.61 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
18 Ts5 roots 2hr KCl control 0.51 >More info 0.44 >More info Col0 roots 2hr KCl control root Original data GEO bulk
19 WT Shoot Hypoxia -0.32 >More info -0.63 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
20 24h +Pi 0.54 >More info 0.40 >More info 24h -Pi root Original data GEO bulk
21 1.5 hr nitrate 0.36 >More info 0.58 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
22 Brz220 12 h 0.42 >More info 0.51 >More info Mock 12 h Original data Effect of brassinosteroid inhibitors on seedlings
23 Osmotic Stress 24 h (root) -0.68 >More info -0.24 >More info Stress mock 24 h (root) Original data Stress treatments
24 root hypoxia pGL2 -0.72 >More info -0.20 >More info root hypoxia total hypoxia root Original data GEO bulk
25 2hr continuous KNO3 ECR cell 0.21 >More info 0.71 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
26 root hypoxia pCO2 -0.68 >More info -0.23 >More info root hypoxia total hypoxia root Original data GEO bulk
27 1hr-pH4.5 -0.75 >More info -0.15 >More info 1hr-pH6 1hr pH 4.5 roots Original data GEO bulk
28 Heat and anoxia -0.58 >More info -0.31 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
29 inhibitor A Treated -0.57 >More info -0.32 >More info Negative Control Original data GEO bulk
30 root - 08% oxygen - 30min -0.30 >More info -0.59 >More info root - 21% oxygen - 30min Original data GEO bulk
31 Laer pretreat GA Flg22 1h 0.18 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
32 ANAC102 over-expressor -0.64 >More info -0.23 >More info C24 Original data GEO bulk
33 35S:miR396 -0.60 >More info -0.27 >More info WT 0 days-old seedlings. Original data GEO bulk
34 TAMM27 roots 2hr KNO3 nitrogen -0.51 >More info -0.36 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
35 jkd-4 QC -0.62 >More info -0.24 >More info Col-0 QC Quiescent Center Original data
36 ABA -0.64 >More info -0.22 >More info control Original data GEO bulk
37 6h +Pi 0.62 >More info 0.24 >More info 6h -Pi root Original data GEO bulk
38 root control pCO2 -0.58 >More info -0.28 >More info root control total control root Original data GEO bulk
39 Mock pft1 leaf 0.55 >More info 0.30 >More info Mock Col-0 leaf water leaf Original data GEO bulk
40 pericycle auxin -0.66 >More info -0.18 >More info pericycle control 5 uM indole-3-acetic acid pericycle Original data GEO bulk
41 cys-c1 root -0.52 >More info -0.32 >More info Root-WT roots Original data GEO bulk
42 mutant-line1135 0.66 >More info 0.18 >More info WT-control whole plant Original data GEO bulk
43 whole roots 140 mM NaCl 16 hour -0.66 >More info -0.18 >More info whole roots standard Original data GEO bulk
44 ddm1-12 0.66 >More info 0.18 >More info wt whole seedling Original data GEO bulk
45 Cocultivation 8 hrs root -0.55 >More info -0.29 >More info Mock cocultivation 8 hrs root Root Original data
46 WT H2O2 3h -0.58 >More info -0.26 >More info WT water 3h 3h_H2O2 Original data GEO bulk
47 rosettes atx drought -0.56 >More info -0.27 >More info rosettes atx watered Original data GEO bulk
48 root control pGL2 -0.53 >More info -0.30 >More info root control total control root Original data GEO bulk
49 whole roots 140 mM NaCl 32 hour -0.61 >More info -0.22 >More info whole roots standard Original data GEO bulk
50 root - 04% oxygen - 30min -0.31 >More info -0.51 >More info root - 21% oxygen - 30min Original data GEO bulk
51 root stele pH4.6 -0.58 >More info -0.24 >More info root stele pH5.7 Original data GEO bulk
52 empty vector IAA Treated -0.68 >More info -0.13 >More info empty vector mock Original data GEO bulk
53 2hr continuous KNO3 PrR cell 0.29 >More info 0.52 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
54 cngc4 -0.58 >More info -0.23 >More info Ws-2 Seedlings Original data GEO bulk
55 RRE1 Chitin -0.75 >More info -0.05 >More info Chitin Original data GEO bulk
56 whole roots 140 mM NaCl 4 hour -0.56 >More info -0.24 >More info whole roots standard Original data GEO bulk
57 pollinated pop2-1 flowers -0.62 >More info -0.18 >More info pollinated WT flowers flowers Original data GEO bulk
58 gabaculin -0.60 >More info -0.20 >More info WT Col-0 seedling Original data GEO bulk
59 Col-0 drought -0.72 >More info -0.08 >More info Col-0 control Original data GEO bulk
60 Red/FR Light45min 0.05 >More info -0.85 >More info FarRed Light 45min Original data Light treatments
61 250uM K-nitrate 20min roots 0.09 >More info 0.71 >More info 250uM KCl 20min roots Roots Original data GEO bulk
62 Light -0.53 >More info -0.26 >More info Control Original data GEO bulk
63 eds16 whole leaf 6hpi 0.59 >More info 0.20 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
64 Whole root - low pH 3H -0.64 >More info -0.15 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
65 cop1 Seedling BL -0.74 >More info -0.05 >More info WT Seedling BL Original data GEO bulk
66 root longitudinal zone-1 pH 4.6 -0.69 >More info -0.10 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
67 seedling h S Exp 0.57 >More info 0.22 >More info seedling -S Exp seedling Original data
68 Drought Stress 24 h (root) 0.64 >More info 0.14 >More info Stress mock 24 h (root) Original data Stress treatments
69 arr10 arr12 0.71 >More info 0.07 >More info DMSO--WT DMSO roots Original data GEO bulk
70 rao2 H2O2 3h 0.53 >More info 0.25 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
71 Col-0 leaf drought -0.54 >More info -0.24 >More info Col-0 leaf water leaf Original data GEO bulk
72 Mutant axr3-1 (IAA) -0.55 >More info -0.22 >More info Col (IAA) Original data GEO bulk
73 seedling SPL13 0.54 >More info 0.23 >More info seedling Col-0 Original data GEO bulk
74 polysome mRNA eif3k -0.54 >More info -0.23 >More info polysome mRNA WT aerial part Original data GEO bulk
75 dor control -0.78 >More info 0.01 >More info WT control Original data GEO bulk
76 anac017-2 H2O2 3h 0.76 >More info 0.01 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
77 Split KNO3 roots - 2days 0.20 >More info 0.57 >More info Split KCl roots - 2days 5mM KNO3 on ONE side for 2 days roots Original data GEO bulk
78 fri-flc 0.56 >More info 0.20 >More info WT Original data GEO bulk
79 TA induced -0.58 >More info -0.18 >More info Methanol TA Suspension cells Original data GEO bulk
80 Dark 2day hml -0.59 >More info -0.15 >More info 0h hml Original data
81 hira-root 0.56 >More info 0.17 >More info WT-root root Original data
82 Mutant cry1 (High Light) 0.70 >More info 0.03 >More info Col-0 (High Light) Original data GEO bulk
83 siliques WT hypoxia -0.74 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
84 gai Flg22 2h -0.51 >More info -0.22 >More info Laer Flg22 2h leaf discs Original data GEO bulk
85 cry1 high light 0.70 >More info 0.03 >More info Col-O high light Original data GEO bulk
86 root hypoxia pSUC2 -0.66 >More info -0.05 >More info root hypoxia total hypoxia root Original data GEO bulk
87 Methyl Jasmonate 3 h -0.55 >More info -0.16 >More info Mock 3 h Original data Basic hormone treatment of seedlings
88 HopZ1a treated ulp1c ulp1d -0.56 >More info -0.14 >More info col Original data GEO bulk
89 root cells cortex 140mM NaCl 1 hour -0.58 >More info -0.12 >More info root cells cortex standard 1 hour root cells cortex Original data
90 Mutant nph4-1_arf19-1 (IAA) 0.52 >More info 0.18 >More info Col (IAA) Original data GEO bulk
91 WT Shoot-Pi -0.57 >More info -0.13 >More info WT Shoot+Pi shoots Original data GEO bulk
92 root columella root cap 40 mM NaCl -0.52 >More info -0.17 >More info root columella root cap Original data GEO bulk
93 cat2-2; 8h switch to ambient CO2 concentrations; -0.15 >More info -0.54 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
94 root endodermis -S 0.51 >More info 0.18 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
95 Fenclorim 4hr -0.57 >More info -0.12 >More info Acetone 4hr root Original data GEO bulk
96 IAA/inhibitor A Treated -0.52 >More info -0.16 >More info IAA Treated Original data GEO bulk
97 rosettes WT drought -0.62 >More info -0.05 >More info rosettes WT watered Original data GEO bulk
98 Dark 2day wt -0.52 >More info -0.15 >More info 0h wt Original data
99 Brz220 3 h 0.50 >More info 0.16 >More info Mock 3 h Original data Effect of brassinosteroid inhibitors on seedlings
100 ABA SA 3h -0.63 >More info -0.03 >More info EtOH 3h 3hr Original data GEO bulk
101 rdr2-1 -0.50 >More info -0.16 >More info Col-0 Original data GEO bulk
102 bak1-3 +Pep2 10h -0.58 >More info -0.08 >More info WT +Pep2 10h Pep2 Original data GEO bulk
103 WT AntimycinA 3h -0.59 >More info -0.07 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
104 edr1 18 h powdery mildew -0.58 >More info -0.08 >More info Col-0 18 h powdery mildew Original data GEO bulk
105 RRE2 Chitin -0.64 >More info -0.01 >More info Chitin Original data GEO bulk
106 anac017-2 AntimycinA 3h 0.55 >More info 0.10 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
107 root cells stele 140mM NaCl 1 hour -0.51 >More info -0.14 >More info root cells stele standard 1 hour root cells stele Original data
108 RGA-GR-DEX 0.58 >More info 0.07 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
109 Genotoxic Stress 3 h (root) 0.52 >More info 0.12 >More info Stress mock 3 h (root) Original data Stress treatments
110 elevated CO2 normal Mg root 0.51 >More info 0.13 >More info atmospheric CO2 normal Mg root Root Original data
111 Mutant ap2-6(flower) 0.62 >More info 0.02 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
112 des1.1 -0.53 >More info -0.11 >More info Leaves-WT leaf Original data GEO bulk
113 Kas2 roots 2hr KNO3 nitrogen -0.55 >More info -0.08 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
114 Whole root - low pH 1H -0.51 >More info -0.12 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
115 shoot hypoxia total -0.13 >More info -0.50 >More info shoot control total Original data GEO bulk
116 NJ15 -0.08 >More info -0.55 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
117 nd-1 mock 48 hpi -0.53 >More info -0.09 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
118 Mutant hy5 (High Light) 0.59 >More info 0.03 >More info Col-0 (High Light) Original data GEO bulk
119 root longitudinal zone-4 NaCl -0.53 >More info -0.09 >More info root longitudinal zone-4 Original data GEO bulk
120 hy5 high light 0.59 >More info 0.03 >More info Col-O high light Original data GEO bulk
121 LFYGR 0.52 >More info 0.10 >More info WT shoot apices Original data GEO bulk
122 phr1 phl1 Shoot-Pi 0.56 >More info 0.05 >More info WT Shoot-Pi shoots Original data GEO bulk
123 aln-1 -0.55 >More info -0.06 >More info Col-0 Aerial part of seedlings Original data
124 Bay-0-3h IAA -0.53 >More info -0.08 >More info Bay-0-0h IAA whole plant Original data GEO bulk
125 Shoot apex inflorescence (after bolting) -0.04 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
126 Chitin 0.54 >More info 0.06 >More info Col C Original data GEO bulk
127 ABA DFPM -0.53 >More info -0.07 >More info control Original data GEO bulk
128 seed germinating in countinuous light 24h SL -0.07 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
129 cov1 cov2 stem Base -0.50 >More info -0.10 >More info WT stem Base stem Base Original data GEO bulk
130 Heat shock optimum -0.05 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
131 bZIP1ko mutant N-Light+ 0.52 >More info 0.07 >More info WT-sib N-Light+ whole plant Original data GEO bulk
132 Sha-30min IAA -0.55 >More info -0.04 >More info Sha-0h IAA whole plant Original data GEO bulk
133 WT 3H Cold -0.62 >More info 0.03 >More info WT control Original data GEO bulk
134 CCA1-ox 6am non-polysomal 0.08 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
135 coi1-2 -0.52 >More info -0.06 >More info Col-0 mock Whole seedling Original data GEO bulk
136 Stamen stage15 -0.51 >More info -0.07 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
137 C2 leaf-drought -0.54 >More info -0.04 >More info C2 leaf-well watered Original data GEO bulk
138 agb1 +ABA GC -0.53 >More info -0.04 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
139 35S::Zat12 0.52 >More info 0.05 >More info WT Original data GEO bulk
140 Mutant iaa5_6_19(IAA) -0.57 >More info -0.00 >More info Col (IAA) Original data GEO bulk
141 hyl1 0.50 >More info 0.06 >More info Col-0 Original data GEO bulk
142 root cells cortex 140mM NaCl 3 hours -0.52 >More info -0.04 >More info root cells cortex standard 1 hour root cells cortex Original data
143 root cells cortex 140mM NaCl 8 hours -0.51 >More info -0.05 >More info root cells cortex standard 1 hour root cells cortex Original data
144 Mutant iaa17-6 (IAA) -0.65 >More info 0.09 >More info Col (IAA) Original data GEO bulk
145 IPT8 induced 12h -0.70 >More info 0.14 >More info Control 12h 12 hours primary root tip (5 mm) Original data GEO bulk
146 bri1-116 -0.17 >More info 0.73 >More info Col seedling Original data GEO bulk
147 anac017-1 H2O2 3h 0.56 >More info -0.01 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
148 root - 01% oxygen - 2h 0.00 >More info -0.55 >More info root - 21% oxygen - 2h Original data GEO bulk
149 pkl Mutant Uniconazole -0.60 >More info 0.05 >More info pkl Mutant mock Original data GEO bulk
150 gid1a gid1b-1 gid1c-2 1 hr 100 uM GA3 -0.50 >More info -0.04 >More info ga-1 1 hr 100 uM GA3 Original data GEO bulk
151 pft1 23C 0.03 >More info -0.57 >More info WT 23C seedling Original data GEO bulk
152 OE WRKY63.3 high light -0.55 >More info 0.02 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
153 Mutant ap2-6(shoot apex) 0.54 >More info -0.02 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
154 12h-DC3000 avrRpm1 -0.65 >More info 0.13 >More info 12h-DC3000 leaves Original data GEO bulk
155 20m.KNO3 -0.01 >More info 0.53 >More info To. KNO3 14 day old Roots Original data GEO bulk
156 tfl1-1-16ºC -0.50 >More info -0.01 >More info WT-16ºC Original data GEO bulk
157 gir flower 33d 0.64 >More info -0.14 >More info Col-7 flower 33d flower Original data GEO bulk
158 Ler KAR1 24h seed -0.53 >More info 0.04 >More info Ler WATER 24h seed KAR1 seed Original data GEO bulk
159 erf5 erf6 +chitooctaose 0.53 >More info -0.04 >More info WT+chitooctaose chitooctaose seedlings Original data GEO bulk
160 Ba1 UV -0.55 >More info 0.07 >More info Ba1 mock UV seedling Original data
161 an3-4 leaf primordia -0.58 >More info 0.10 >More info WT leaf primordia Original data GEO bulk
162 IPT8 mutant tZ 12h -0.51 >More info 0.04 >More info Control 12h 12 hours primary root tip (5 mm) Original data GEO bulk
163 PNO8 12 h -0.50 >More info 0.03 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
164 ago4-1 -0.50 >More info 0.05 >More info WT La-er whole plants Original data GEO bulk
165 2hr KCl control SR cell -0.57 >More info 0.12 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
166 dyt1 0.55 >More info -0.11 >More info WT anther Original data GEO bulk
167 proline 0.51 >More info -0.08 >More info noneHS Original data GEO bulk
168 HRE1-RNAi20 normoxia -0.58 >More info 0.15 >More info Col upon normoxia normoxia seedling roots Original data GEO bulk
169 GRX-overexpression seedlings IAA -0.54 >More info 0.12 >More info WT seedlings IAA Seedlings Original data GEO bulk
170 cat2-long-day 4d 0.54 >More info -0.13 >More info Col0-LD4 transferred to air (400 ppm) for 4 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
171 Split KNO3 roots - 2hours -0.21 >More info 0.62 >More info Split KCl roots - 2hours 5mM KNO3 on ONE side for 2 hours roots Original data GEO bulk
172 arf2 mock -0.50 >More info 0.10 >More info Col mock Original data GEO bulk
173 Mutant arf2 (etiol) -0.50 >More info 0.10 >More info Col (etiol) Original data GEO bulk
174 Mutant iaa5_6_19 0.51 >More info -0.12 >More info Col Original data GEO bulk
175 Col BTH -0.29 >More info 0.67 >More info Col rosettes Original data GEO bulk
176 Mutant lfy-12(flower) 0.51 >More info -0.13 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
177 nas4x roots + Fe 0.55 >More info -0.17 >More info WT roots + Fe Roots Original data GEO bulk
178 etiolated atbzip16 -0.51 >More info 0.13 >More info etiolated Ler etiolated aerial part of seedlings Original data GEO bulk
179 sid2-avrB-6h -0.51 >More info 0.14 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
180 Leafminer damaged seedlings -0.22 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
181 desiccated mature pollen grains -0.68 >More info 0.35 >More info hydrated pollen grains Original data GEO bulk
182 cat2-2; harvested 8h continiously maintained in
high CO2;
0.50 >More info -0.17 >More info WT; harvested 8h continiously maintained in high
CO2;
2 whole rosettes Original data
183 Blue Light 45 min -0.25 >More info 0.56 >More info White Light 45min Original data Light treatments
184 Col0-PsmES4326-24hpi -0.31 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
185 siliques AtHb1 control -0.23 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
186 WT Nitrate 0.5h -0.43 >More info 0.50 >More info WT untreated Original data GEO bulk