4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on SHR-GR Time 1H Dex
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List of experiments correlated with "SHR-GR Time 1H Dex"  Help Download transcriptome of top 30
Score Experiment Correlation from
SHR-GR Time 1H Dex		 Correlation to
SHR-GR Time 1H Dex		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 SHR-GR Time 1H Dex 1.00 >More info 1.00 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
2 SHR-GR Time 3H Dex 0.81 >More info 0.83 >More info SHR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
3 SCR-GR Time 12H Dex 0.68 >More info 0.74 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
4 SCR-GR Time 6H Dex 0.72 >More info 0.68 >More info SCR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
5 root stele -S -0.67 >More info -0.73 >More info root stele pH5.7 Original data GEO bulk
6 SCR-GR Time 1H Dex 0.56 >More info 0.80 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
7 upb1-1 elongation zone 0.63 >More info 0.67 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
8 root stele 40 mM NaCls 0.67 >More info 0.60 >More info root stele Original data GEO bulk
9 21h-DC3000 avrRpm1 -0.52 >More info -0.73 >More info 21h-DC3000 leaves Original data GEO bulk
10 root longitudinal zone-3 low sulfur -0.60 >More info -0.64 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
11 root longitudinal zone-1 low sulfur -0.57 >More info -0.64 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
12 root epidermis and lateral root cap -S -0.44 >More info -0.72 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
13 root callus inducing medium 96 h -0.66 >More info -0.47 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
14 tunicamycin -0.43 >More info -0.70 >More info DMF Original data GEO bulk
15 aox1a:rpoTmp MLD stressed -0.56 >More info -0.54 >More info WT(Col0) MLD stressed (control aox1a:rpoTmp) leaf Original data
16 WT Shoot-Pi 0.63 >More info 0.47 >More info WT Shoot+Pi shoots Original data GEO bulk
17 root cells cortex 140mM NaCl 32 hours -0.63 >More info -0.46 >More info root cells cortex standard 1 hour root cells cortex Original data
18 Wounding Stress3 h (shoot) 0.52 >More info 0.57 >More info Stress mock 3 h (shoot) Original data Stress treatments
19 root protoplasts 40 mM NaCl 0.64 >More info 0.44 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
20 root cells epidermis 140mM NaCl 32 hours -0.61 >More info -0.46 >More info root cells epidermis standard 1 hour root cells epidermis Original data
21 Col ozone 3h 0.40 >More info 0.67 >More info Col clean-air 3h ozone Original data GEO bulk
22 root longitudinal zone-2 low sulfur -0.57 >More info -0.49 >More info root longitudinal zone-2 pH 5.7 Original data GEO bulk
23 root cortex 40 mM NaCl 0.65 >More info 0.41 >More info root cortex Original data GEO bulk
24 SCR-GR Time 3H Dex 0.50 >More info 0.56 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
25 bZIP1ko mutant N+Light- 0.43 >More info 0.63 >More info WT-sib N+Light- whole plant Original data GEO bulk
26 embryo proper linear-cotyledon -0.57 >More info -0.47 >More info whole seeds linear-cotyledon Original data GEO bulk
27 dcl3-1 0.60 >More info 0.44 >More info Col-0 Original data GEO bulk
28 tZ -0.56 >More info -0.48 >More info DMSO--WT trans-zeatin roots Original data GEO bulk
29 ABA JA 24h 0.39 >More info 0.65 >More info EtOH 24h 24hr Original data GEO bulk
30 Col0-PsmES4326-24hpi 0.42 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
31 OXUPB1-2 meristematic zone -0.42 >More info -0.61 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
32 root cells epidermis 140mM NaCl 8 hours -0.61 >More info -0.40 >More info root cells epidermis standard 1 hour root cells epidermis Original data
33 general seed coat pre-globular -0.50 >More info -0.51 >More info whole seed sections pre-globular Original data GEO bulk
34 gpa1 -ABA GC -0.38 >More info -0.63 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
35 HopZ1a treated 0.46 >More info 0.55 >More info col Original data GEO bulk
36 WT+chitooctaose 0.46 >More info 0.55 >More info WT+water chitooctaose seedlings Original data GEO bulk
37 vte2-1 1d vernalization 0.48 >More info 0.53 >More info WT 1d vernalization Original data GEO bulk
38 dyt1 -0.67 >More info -0.33 >More info WT anther Original data GEO bulk
39 seedling h S Exp -0.51 >More info -0.49 >More info seedling -S Exp seedling Original data
40 stele auxin -0.64 >More info -0.36 >More info stele control 5 uM indole-3-acetic acid stele Original data GEO bulk
41 stn7-1 -0.42 >More info -0.58 >More info Col-0 rosette leaves Original data GEO bulk
42 21h-DC3000 hrpA -0.44 >More info -0.56 >More info 21h-DC3000 leaves Original data GEO bulk
43 Pto inoculated 0.50 >More info 0.49 >More info col Original data GEO bulk
44 P35S:rGRF1 -0.57 >More info -0.42 >More info Col-0 Original data GEO bulk
45 low CO2 + light 0.35 >More info 0.64 >More info normal CO2 + light Original data GEO bulk
46 anac017-2 AntimycinA 3h -0.43 >More info -0.56 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
47 35:SUB1C 0.51 >More info 0.47 >More info WT whole seedling Original data GEO bulk
48 root cells epidermis 140mM NaCl 20 hours -0.59 >More info -0.39 >More info root cells epidermis standard 1 hour root cells epidermis Original data
49 SHR-GR Time 12H Dex -0.56 >More info -0.42 >More info SHR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
50 Col 1d 0.51 >More info 0.47 >More info Col CA Leaves Original data
51 root callus inducing medium 48 h -0.59 >More info -0.39 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
52 Col-0 (t-zeatin 3 h) -0.42 >More info -0.56 >More info Col-0 Original data Cytokinin treatment of seedlings
53 Mutant arf2-6 (IAA) -0.45 >More info -0.53 >More info Col (IAA) Original data GEO bulk
54 HopZ1a treated ulp1c ulp1d 0.44 >More info 0.54 >More info col Original data GEO bulk
55 WT AntimycinA 3h 0.40 >More info 0.58 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
56 line J1551-5 days control + 2 days salt s -0.40 >More info -0.58 >More info line J1551-7 days-control Original data
57 cov1 cov2 stem Base 0.56 >More info 0.41 >More info WT stem Base stem Base Original data GEO bulk
58 8-DAC chr11-1chr17-1 0.58 >More info 0.39 >More info 8-DAC Col-0 leaf explants Original data
59 Phaseolicola 2 h (leaf) 0.40 >More info 0.57 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
60 rosette Light Wounded 0.41 >More info 0.56 >More info rosette Light Control Original data GEO bulk
61 MYB46-GR DEX 0.28 >More info 0.68 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
62 Whole root - low pH 6H 0.53 >More info 0.43 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
63 Col leaves 120h LT -0.51 >More info -0.45 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
64 TA induced 0.37 >More info 0.59 >More info Methanol TA Suspension cells Original data GEO bulk
65 bHLH122 ox -0.41 >More info -0.55 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
66 dorn1-1 Root 100 mM ATP 30 min -0.41 >More info -0.55 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
67 rosette leaves fdh 0.39 >More info 0.56 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
68 WT no Pi 0.54 >More info 0.41 >More info WT complete seedlings Original data
69 root longitudinal zone-4 low sulfur -0.50 >More info -0.45 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
70 Light 3day wt -0.37 >More info -0.58 >More info 0h wt Original data
71 arp6-10 12 ºC -0.42 >More info -0.53 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
72 ein2-1 9 hpi A. brassicicola 0.41 >More info 0.54 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
73 root cells epidermis 140mM NaCl 3 hours -0.50 >More info -0.44 >More info root cells epidermis standard 1 hour root cells epidermis Original data
74 GST NPP1 4 h (leaf) 0.35 >More info 0.59 >More info Mock 4 h (leaf) Original data Elicitor treatments
75 Col-Luc WT 3h antimycin A 0.43 >More info 0.50 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
76 col-5 hrpA 12h 0.35 >More info 0.58 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
77 bak1-3 +Pep2 10h 0.38 >More info 0.54 >More info WT +Pep2 10h Pep2 Original data GEO bulk
78 red illumination +lincomycin -0.24 >More info -0.68 >More info red illumination -lincomycin Original data GEO bulk
79 ein5-1 ski2-3 0.42 >More info 0.50 >More info Col-0 aerial tissue Original data
80 WT in -N 0.55 >More info 0.36 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
81 embryo proper pre-globular -0.57 >More info -0.34 >More info whole seed sections pre-globular Original data GEO bulk
82 Rsch 8h 0.41 >More info 0.50 >More info Rsch CA Leaves Original data
83 GA4 3 h (ga1 seed) -0.50 >More info -0.40 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
84 toc1-1-73hr -0.55 >More info -0.35 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
85 cat2-2; 8h switch to ambient CO2 concentrations; 0.28 >More info 0.62 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
86 Lipopolysaccaride4 h (leaf) 0.33 >More info 0.57 >More info Mock 4 h (leaf) Original data Elicitor treatments
87 myb3 myb3r4d 0.30 >More info 0.60 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
88 LTN005-2 TSA -0.55 >More info -0.34 >More info LTN012-2 Mock Original data
89 IXB induced 0.33 >More info 0.56 >More info Methanol IXB Suspension cells Original data GEO bulk
90 siliques AtHb1 hypoxia -0.54 >More info -0.35 >More info siliques WT hypoxia hypoxia silique Original data GEO bulk
91 root cells epidermis 140mM NaCl 48 hours -0.54 >More info -0.35 >More info root cells epidermis standard 1 hour root cells epidermis Original data
92 flu over-tAPX 0.31 >More info 0.58 >More info WT Col Original data GEO bulk
93 Col-0 9 hpi A. brassicicola 0.32 >More info 0.57 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
94 hira-protoplast -0.30 >More info -0.59 >More info WT-protoplast protoplast Original data
95 naxillin 3h 0.38 >More info 0.50 >More info before treatment naxillin root Original data GEO bulk
96 downy mildew cotyledons late stage 0.54 >More info 0.33 >More info mock inoculated Cotyledons Original data GEO bulk
97 Leaf wounded 0.32 >More info 0.55 >More info Leaf control vegetative leaf Original data GEO bulk
98 mpk6-ko Flg22 4h 0.25 >More info 0.62 >More info mpk6-ko H2O 4h Original data GEO bulk
99 dcl2-1 0.54 >More info 0.32 >More info Col-0 Original data GEO bulk
100 GST 4 h (leaf) 0.18 >More info 0.68 >More info Mock 4 h (leaf) Original data Elicitor treatments
101 dark +H2O2 -0.31 >More info -0.54 >More info dark 5 mM H2O2 seedling Original data GEO bulk
102 arr10 arr12 -0.61 >More info -0.24 >More info DMSO--WT DMSO roots Original data GEO bulk
103 Flagellin 4 h (leaf) 0.25 >More info 0.60 >More info Mock 4 h (leaf) Original data Elicitor treatments
104 flu 0.29 >More info 0.55 >More info WT Col Original data GEO bulk
105 Col-0-avrB-6h 0.28 >More info 0.56 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
106 WT 3H Cold 0.18 >More info 0.66 >More info WT control Original data GEO bulk
107 Leafminer damaged seedlings 0.28 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
108 ABA SA 24h 0.15 >More info 0.69 >More info EtOH 24h 24hr Original data GEO bulk
109 seedling -S Exp 0.51 >More info 0.32 >More info seedling FN Exp seedling Original data
110 ataf1-1 mutant Col-0 Bgh inoculated 0.33 >More info 0.50 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
111 GiantCell Root -0.32 >More info -0.51 >More info Control Root laser captured giant cells Original data GEO bulk
112 hrcC 0.33 >More info 0.50 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
113 rosette Dark Wounded 0.26 >More info 0.57 >More info rosette Dark Control Original data GEO bulk
114 gai MeJA 1h -0.51 >More info -0.31 >More info Laer MeJA 1h leaf discs Original data GEO bulk
115 IAA7mII over-expressor IAA Treated 0.13 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
116 miR396b overexpressor 0.53 >More info 0.28 >More info Col-0 vegetative apices together with the leaf primordia Original data
117 WT NAA/flg 1h 0.29 >More info 0.52 >More info WT 0h Leaf tissue Original data GEO bulk
118 Col BTH 0.14 >More info 0.67 >More info Col rosettes Original data GEO bulk
119 SCR 96hr-S -0.31 >More info -0.50 >More info SCR 0hr endodermis Original data
120 WT 2-4h Xanthomonas 0.22 >More info 0.58 >More info WT T0 Original data GEO bulk
121 Salt Stress 24 h (shoot) 0.53 >More info 0.26 >More info Stress mock 24 h (shoot) Original data Stress treatments
122 root cells endodermis 140mM NaCl 20 hours -0.54 >More info -0.25 >More info root cells endodermis standard 1 hour root cells endodermis Original data
123 rdr6-15 -0.51 >More info -0.28 >More info Col-0 Original data GEO bulk
124 35S::ERF104 Flg22 4h 0.26 >More info 0.53 >More info 35S::ERF104 H2O 4h Original data GEO bulk
125 P.p 10.5hai 0.27 >More info 0.52 >More info At-Control roots Original data GEO bulk
126 35S::MBF1c 0.25 >More info 0.54 >More info control Original data GEO bulk
127 col-5 DC3000 12h 0.25 >More info 0.54 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
128 Shoot -Cs 0.29 >More info 0.50 >More info Control-shoot Original data GEO bulk
129 Inflorescences Trp1 -0.19 >More info -0.60 >More info Inflorescences ler inflorescences Original data GEO bulk
130 root cells endodermis 140mM NaCl 48 hours -0.53 >More info -0.25 >More info root cells endodermis standard 1 hour root cells endodermis Original data
131 root cells epidermis and lateral root cap -Fe -0.50 >More info -0.28 >More info whole roots standard Original data GEO bulk
132 WT flg22 1h 0.28 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
133 rsa3-1 Na 24h 0.26 >More info 0.52 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
134 E.coli TUV86 2 fliC 7h 0.19 >More info 0.59 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
135 WT-Dry 0.25 >More info 0.53 >More info WT-CK dehydration treatment 1h Original data
136 AvrRpm1 2 h (leaf) 0.27 >More info 0.50 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
137 Laer pretreat GA Flg22 1h 0.06 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
138 Whole root - S 3H 0.23 >More info 0.54 >More info Whole root - S 0H Original data GEO bulk
139 E.coli 0157 H7 7h 0.20 >More info 0.57 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
140 rdr2-1 0.59 >More info 0.17 >More info Col-0 Original data GEO bulk
141 SA 4mM 0.08 >More info 0.68 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
142 dorn1-1 Root MES buffer 30 min -0.26 >More info -0.50 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
143 AFB1 flg22 1h 0.23 >More info 0.52 >More info WT 0h Leaf tissue Original data GEO bulk
144 hrpA fliC 7h 0.23 >More info 0.52 >More info Mock 7h hrpA fliC Original data GEO bulk
145 GO5; 8h switch to ambient CO2 concentrations; 0.20 >More info 0.55 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
146 root cells cortex 140mM NaCl 20 hours -0.53 >More info -0.21 >More info root cells cortex standard 1 hour root cells cortex Original data
147 miR393 flg22 1h 0.24 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
148 col-5 DC3000-avrRpm 4h 0.22 >More info 0.52 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
149 Mutant arf2-6 -0.50 >More info -0.23 >More info Col Original data GEO bulk
150 del1-1 mutant 5d uninfected 0.17 >More info 0.54 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
151 seedlings protease IV 0.16 >More info 0.54 >More info seedlings nontreated control whole seedling Original data
152 Drought Stress 24 h (shoot) 0.51 >More info 0.19 >More info Stress mock 24 h (shoot) Original data Stress treatments
153 ahg3-1 -0.50 >More info -0.20 >More info ABA control Original data GEO bulk
154 35S:VND7-VP16-GR+CHX 0.07 >More info 0.63 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
155 Mutant ap2-6(flower) -0.52 >More info -0.17 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
156 Seedling KUA1-IOX est 0.12 >More info 0.56 >More info Seedling KUA1-IOX mock Original data
157 T101A 10mM NH4NO3 0.52 >More info 0.15 >More info col 10mM NH4NO3 Root Original data
158 Blue Light 45 min -0.15 >More info -0.52 >More info White Light 45min Original data Light treatments
159 hrpA 7h 0.12 >More info 0.55 >More info Mock 7h hrpA Original data GEO bulk
160 Protoplast Induced 0.09 >More info 0.58 >More info Uninduced Original data GEO bulk
161 sfr6 drought -0.11 >More info -0.55 >More info WT drought All aerial tissue Original data GEO bulk
162 root cells cortex 140mM NaCl 48 hours -0.54 >More info -0.11 >More info root cells cortex standard 1 hour root cells cortex Original data
163 Col-0 Flg22 4h 0.04 >More info 0.61 >More info Col-0 H2O 4h Original data GEO bulk
164 WT 3h -P -0.02 >More info 0.66 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
165 miR393 0h -0.05 >More info -0.57 >More info WT 0h Leaf tissue Original data GEO bulk
166 PNO8 3 h 0.07 >More info 0.54 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
167 Te 8h 0.10 >More info 0.51 >More info Te CA Leaves Original data
168 T101D 10mM NH4NO3 0.55 >More info 0.04 >More info col 10mM NH4NO3 Root Original data
169 roottip hypoxia pSCR -0.07 >More info -0.51 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
170 oas-a1.1 Cd 18h 0.08 >More info 0.50 >More info Cd 18h root Root Original data GEO bulk
171 PIF5ox low R/FR -0.51 >More info -0.06 >More info Col-0 low R/FR low R/FR seedlings Original data GEO bulk
172 penta MeJA 1h 0.51 >More info 0.03 >More info Laer MeJA 1h leaf discs Original data GEO bulk
173 cat2-short-day 2d 0.03 >More info 0.50 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
174 ckh1 CK200 0.02 >More info 0.50 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
175 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
176 Heat shock optimum -0.14 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
177 atm3 -0.03 >More info 0.53 >More info Col0 whole plant Original data GEO bulk
178 xyl-grown cell culture- 1h 1mM Suc 0.08 >More info -0.54 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
179 QC pSCR 0h BL -0.53 >More info 0.09 >More info WR 35S 0h BL brassinosteroid root Original data
180 ms35 silique stage 7 0.14 >More info -0.57 >More info Ler 6.7 anther and filament Original data GEO bulk
181 bri1-116 -0.31 >More info 0.73 >More info Col seedling Original data GEO bulk
182 root cap pGL2(QC pSCRBRI1) 0h BL -0.51 >More info 0.11 >More info WR 35S 0h BL brassinosteroid root Original data
183 seed germinating in countinuous light 24h SL -0.28 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
184 Shoot apex inflorescence (after bolting) -0.35 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
185 siliques AtHb1 control -0.28 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk